메뉴 건너뛰기




Volumn 131, Issue 3, 2012, Pages 885-891

Molecular identification of decay fungi in the wood of urban trees

Author keywords

Molecular identification; rDNA ITS sequences; Tree rot fungi; Urban trees

Indexed keywords

ACCURACY ASSESSMENT; DNA; FRUIT; FUNGUS; TREE; URBAN AREA;

EID: 84859490984     PISSN: 16124669     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10342-011-0562-9     Document Type: Article
Times cited : (53)

References (64)
  • 1
    • 0037150043 scopus 로고    scopus 로고
    • A molecular approach for early monitoring of decay basidiomycetes in wood chips
    • Adair S, Kim SH, Breuil C (2002) A molecular approach for early monitoring of decay basidiomycetes in wood chips. FEMS Microbiol Lett 211: 117-122.
    • (2002) FEMS Microbiol Lett , vol.211 , pp. 117-122
    • Adair, S.1    Kim, S.H.2    Breuil, C.3
  • 2
    • 27644456718 scopus 로고    scopus 로고
    • Conifer root and butt rot caused by Heterobasidion annosum (Fr.) Bref. s. l
    • Asiegbu FO, Adomas AL, Stenlid J (2005) Conifer root and butt rot caused by Heterobasidion annosum (Fr.) Bref. s. l. Mol Plant Pathol 6: 395-409.
    • (2005) Mol Plant Pathol , vol.6 , pp. 395-409
    • Asiegbu, F.O.1    Adomas, A.L.2    Stenlid, J.3
  • 5
    • 0031104121 scopus 로고    scopus 로고
    • Immunological detection of wood decay fungi: an overview of techniques developed from 1986 to present
    • Clausen C (1997) Immunological detection of wood decay fungi: an overview of techniques developed from 1986 to present. Int Biodet Biodegrad 39: 133-143.
    • (1997) Int Biodet Biodegrad , vol.39 , pp. 133-143
    • Clausen, C.1
  • 6
    • 0002382022 scopus 로고
    • Comparative biochemistry of the decay of sweet gum sapwood by white-rot and brown-rot fungi
    • Cowling EB (1961) Comparative biochemistry of the decay of sweet gum sapwood by white-rot and brown-rot fungi. US Dept Agricult Tech Bull No 1258: 1-75.
    • (1961) US Dept Agricult Tech Bull No , vol.1258 , pp. 1-75
    • Cowling, E.B.1
  • 9
    • 0142022169 scopus 로고    scopus 로고
    • A new wood-decaying basidiomycete species associated with esca of grapevine: Fomitoporia mediterranea (Hymenochaetales)
    • Fischer M (2002) A new wood-decaying basidiomycete species associated with esca of grapevine: Fomitoporia mediterranea (Hymenochaetales). Mycol Prog 1: 315-324.
    • (2002) Mycol Prog , vol.1 , pp. 315-324
    • Fischer, M.1
  • 10
    • 6244238237 scopus 로고    scopus 로고
    • Use of taxon-specific competitive-priming PCR to study host specificity, hybridization, and intergroup gene flow in intersterility groups of Heterobasidion annosum
    • Garbelotto M, Ratcliff A, Bruns TD, Cobb FW, Otrosina W (1996) Use of taxon-specific competitive-priming PCR to study host specificity, hybridization, and intergroup gene flow in intersterility groups of Heterobasidion annosum. Phytopathology 86: 543-551.
    • (1996) Phytopathology , vol.86 , pp. 543-551
    • Garbelotto, M.1    Ratcliff, A.2    Bruns, T.D.3    Cobb, F.W.4    Otrosina, W.5
  • 11
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes: application to the identification of mycorrhizae and rusts
    • Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes: application to the identification of mycorrhizae and rusts. Mol Ecol 2: 113-118.
    • (1993) Mol Ecol , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 12
    • 80053312319 scopus 로고    scopus 로고
    • Use of fungal biosystematics and molecular genetics in detection and identification of wood-decay fungi for improved forest management
    • doi:10.1111/j.1439-0329.2010.00681.x
    • Glaeser JA, Lindner DL (2010) Use of fungal biosystematics and molecular genetics in detection and identification of wood-decay fungi for improved forest management. For Path. doi: 10. 1111/j. 1439-0329. 2010. 00681. x.
    • (2010) For Path , vol.36 , Issue.15 , pp. 252-266
    • Glaeser, J.A.1    Lindner, D.L.2
  • 13
    • 35448981957 scopus 로고    scopus 로고
    • A multiplex PCR-based method for the detection and early identification of wood rotting fungi in standing trees
    • Guglielmo F, Bergemann SE, Gonthier P, Nicolotti G, Garbelotto M (2007) A multiplex PCR-based method for the detection and early identification of wood rotting fungi in standing trees. J Appl Microbiol 103: 1490-1507.
    • (2007) J Appl Microbiol , vol.103 , pp. 1490-1507
    • Guglielmo, F.1    Bergemann, S.E.2    Gonthier, P.3    Nicolotti, G.4    Garbelotto, M.5
  • 14
    • 77953534079 scopus 로고    scopus 로고
    • Optimization of sampling procedures for DNA-based diagnosis of wood decay fungi in standing trees
    • Guglielmo F, Gonthier P, Garbelotto M, Nicolotti G (2010) Optimization of sampling procedures for DNA-based diagnosis of wood decay fungi in standing trees. Lett Appl Microbiol 51: 90-97.
    • (2010) Lett Appl Microbiol , vol.51 , pp. 90-97
    • Guglielmo, F.1    Gonthier, P.2    Garbelotto, M.3    Nicolotti, G.4
  • 15
    • 65049087354 scopus 로고    scopus 로고
    • Qualitative and quantitative PCR methods using species-specific primer for detection and identification of wood rot fungi
    • Horisawa S, Sakuma Y, Doi S (2009) Qualitative and quantitative PCR methods using species-specific primer for detection and identification of wood rot fungi. J Wood Sci 55: 133-138.
    • (2009) J Wood Sci , vol.55 , pp. 133-138
    • Horisawa, S.1    Sakuma, Y.2    Doi, S.3
  • 16
    • 33745489268 scopus 로고    scopus 로고
    • Identification key for European strand-forming house-rot fungi
    • Huckfeldt T, Schmidt O (2006) Identification key for European strand-forming house-rot fungi. Mycologist 20: 42-56.
    • (2006) Mycologist , vol.20 , pp. 42-56
    • Huckfeldt, T.1    Schmidt, O.2
  • 19
    • 0001283179 scopus 로고
    • Immunological detection of decay in wood
    • Jellison J, Goodell B (1988) Immunological detection of decay in wood. Wood Sci Technol 22: 293-297.
    • (1988) Wood Sci Technol , vol.22 , pp. 293-297
    • Jellison, J.1    Goodell, B.2
  • 21
    • 0033594243 scopus 로고    scopus 로고
    • Molecular identification of wood-inhabiting fungi in an unmanaged Picea abies forest in Sweden
    • Johannesson H, Stenlid J (1999) Molecular identification of wood-inhabiting fungi in an unmanaged Picea abies forest in Sweden. For Ecol Manag 115: 203-211.
    • (1999) For Ecol Manag , vol.115 , pp. 203-211
    • Johannesson, H.1    Stenlid, J.2
  • 22
    • 84859513367 scopus 로고    scopus 로고
    • Joint Genome Institute
    • Joint Genome Institute (2011) http://www. genome. jgi-psf. org.
    • (2011)
  • 23
    • 4644226068 scopus 로고    scopus 로고
    • Molecular phylogenetics suggest a North American link between the anthropogenic dry rot fungus Serpula lacrymans and its wild relative S. himantioides
    • Kauserud H, Högberg B, Knudsen H, Elbornes SA, Schumacher T (2004) Molecular phylogenetics suggest a North American link between the anthropogenic dry rot fungus Serpula lacrymans and its wild relative S. himantioides. Molec Ecol 13: 3137-3146.
    • (2004) Molec Ecol , vol.13 , pp. 3137-3146
    • Kauserud, H.1    Högberg, B.2    Knudsen, H.3    Elbornes, S.A.4    Schumacher, T.5
  • 26
    • 33746919909 scopus 로고    scopus 로고
    • Spatial and temporal diversity of wood decomposer communities in different forest stands, determined by ITS rDNA targeted TGGE
    • Kulhánková A, Béguiristain T, Moukoumi J, Berthelin J, Ranger J (2006) Spatial and temporal diversity of wood decomposer communities in different forest stands, determined by ITS rDNA targeted TGGE. Ann For Sci 63: 547-556.
    • (2006) Ann For Sci , vol.63 , pp. 547-556
    • Kulhánková, A.1    Béguiristain, T.2    Moukoumi, J.3    Berthelin, J.4    Ranger, J.5
  • 32
    • 0034578777 scopus 로고    scopus 로고
    • Identification of indoor rot fungi by taxon-specific priming polymerase chain reaction
    • Moreth U, Schmidt O (2000) Identification of indoor rot fungi by taxon-specific priming polymerase chain reaction. Holzforschung 54: 1-8.
    • (2000) Holzforschung , vol.54 , pp. 1-8
    • Moreth, U.1    Schmidt, O.2
  • 33
    • 14044262393 scopus 로고    scopus 로고
    • Investigations on ribosomal DNA of indoor wood decay fungi for their characterization and identification
    • Moreth U, Schmidt O (2005) Investigations on ribosomal DNA of indoor wood decay fungi for their characterization and identification. Holzforschung 59: 90-93.
    • (2005) Holzforschung , vol.59 , pp. 90-93
    • Moreth, U.1    Schmidt, O.2
  • 34
    • 65349096263 scopus 로고    scopus 로고
    • A biomolecular method for the detection of wood decay fungi: a focus on the tree stability assessment
    • Nicolotti F, Gonthier P, Guglielmo F, Garbelotto MM (2009) A biomolecular method for the detection of wood decay fungi: a focus on the tree stability assessment. Arboric Urban For 35: 14-19.
    • (2009) Arboric Urban For , vol.35 , pp. 14-19
    • Nicolotti, F.1    Gonthier, P.2    Guglielmo, F.3    Garbelotto, M.M.4
  • 35
    • 0003144686 scopus 로고    scopus 로고
    • Taxonomy of the genus Heterobasidion
    • S. Woodward, J. Stenlid, R. Karjalainen, A. Hüttermann (Eds.), London: CAB Intern
    • Niemelä T, Korhonen K (1998) Taxonomy of the genus Heterobasidion. In: Woodward S, Stenlid J, Karjalainen R, Hüttermann A (eds) Heterobasidion annosum: Biology, ecology, impact and control. CAB Intern, London, pp 27-35.
    • (1998) Heterobasidion Annosum: Biology, Ecology, Impact and Control , pp. 27-35
    • Niemelä, T.1    Korhonen, K.2
  • 36
    • 0001152587 scopus 로고
    • Identification of cultures of wood-inhabiting hymenomycetes
    • Nobles MK (1965) Identification of cultures of wood-inhabiting hymenomycetes. Can J Bot 43: 1097-1139.
    • (1965) Can J Bot , vol.43 , pp. 1097-1139
    • Nobles, M.K.1
  • 38
    • 0037001563 scopus 로고    scopus 로고
    • rDNA-ITS sequence of Armillaria species and a specific primer for A. mellea
    • Potyralska A, Schmidt O, Moreth U, Łakomy P, Siwecki R (2002) rDNA-ITS sequence of Armillaria species and a specific primer for A. mellea. For Genet 9: 119-123.
    • (2002) For Genet , vol.9 , pp. 119-123
    • Potyralska, A.1    Schmidt, O.2    Moreth, U.3    Łakomy, P.4    Siwecki, R.5
  • 39
    • 78650438977 scopus 로고    scopus 로고
    • Relationship between wood-inhabiting fungi determined by molecular analysis (denaturing gradient gel electrophoresis) and quality of decaying logs
    • Rajala T, Peltoniemi M, Pennanen T, Mäkipää R (2010) Relationship between wood-inhabiting fungi determined by molecular analysis (denaturing gradient gel electrophoresis) and quality of decaying logs. Can J For Res 40: 2384-2397.
    • (2010) Can J For Res , vol.40 , pp. 2384-2397
    • Rajala, T.1    Peltoniemi, M.2    Pennanen, T.3    Mäkipää, R.4
  • 42
    • 0021810764 scopus 로고
    • Occurrence of microorganisms in the wood of Norway spruce trees from pollutes sites
    • Schmidt O (1985) Occurrence of microorganisms in the wood of Norway spruce trees from pollutes sites. Eur J For Path 15: 2-10.
    • (1985) Eur J For Path , vol.15 , pp. 2-10
    • Schmidt, O.1
  • 44
    • 84891975011 scopus 로고    scopus 로고
    • Molecular identification and characterization of indoor wood-decay fungi
    • Y. Gherbawy, R. L. Mach, and M. K. Rai (Eds.), Hauppage: Nova Sci Pub
    • Schmidt O (2009) Molecular identification and characterization of indoor wood-decay fungi. In: Gherbawy Y, Mach RL, Rai MK (eds) Current advances in molecular mycology. Nova Sci Pub, Hauppage, pp 333-348.
    • (2009) Current Advances in Molecular Mycology , pp. 333-348
    • Schmidt, O.1
  • 45
    • 85199595507 scopus 로고    scopus 로고
    • Characterization and identification of indoor wood-decaying basidiomycetes
    • O. C. G. Adan and R. A. Samson (Eds.), Wageningen: Wageningen Acad Pub
    • Schmidt O, Huckfeldt T (2011) Characterization and identification of indoor wood-decaying basidiomycetes. In: Adan OCG, Samson RA (eds) Fundamentals of molds growth in indoor environments and strategies for healthy living. Wageningen Acad Pub, Wageningen, pp 117-168.
    • (2011) Fundamentals of Molds Growth in Indoor Environments and Strategies for Healthy Living , pp. 117-168
    • Schmidt, O.1    Huckfeldt, T.2
  • 46
    • 0001083405 scopus 로고
    • Characterization and identification of the dry rot fungus Serpula lacrymans
    • Schmidt O, Kebernik U (1989) Characterization and identification of the dry rot fungus Serpula lacrymans. Holzforschung 43: 195-198.
    • (1989) Holzforschung , vol.43 , pp. 195-198
    • Schmidt, O.1    Kebernik, U.2
  • 47
    • 0031646114 scopus 로고    scopus 로고
    • Characterization of indoor rot fungi by RAPD analysis
    • Schmidt O, Moreth U (1998) Characterization of indoor rot fungi by RAPD analysis. Holzforschung 52: 229-233.
    • (1998) Holzforschung , vol.52 , pp. 229-233
    • Schmidt, O.1    Moreth, U.2
  • 48
    • 0032665880 scopus 로고    scopus 로고
    • Identification of the dry rot fungus, Serpula lacrymans, and the wild merulius, S. himantioides, by amplified ribosomal DNA restriction analysis (ARDRA)
    • Schmidt O, Moreth U (1999) Identification of the dry rot fungus, Serpula lacrymans, and the wild merulius, S. himantioides, by amplified ribosomal DNA restriction analysis (ARDRA). Holzforschung 53: 123-128.
    • (1999) Holzforschung , vol.53 , pp. 123-128
    • Schmidt, O.1    Moreth, U.2
  • 49
    • 0036863728 scopus 로고    scopus 로고
    • Data bank of rDNA-ITS sequences from building-rot fungi for their identification
    • Schmidt O, Moreth U (2002) Data bank of rDNA-ITS sequences from building-rot fungi for their identification. Wood Sci Technol 36: 429-433.
    • (2002) Wood Sci Technol , vol.36 , pp. 429-433
    • Schmidt, O.1    Moreth, U.2
  • 50
    • 41049113637 scopus 로고    scopus 로고
    • Pseudomonas syringae pv. aesculi associated with horse chestnut bleeding canker in Germany
    • Schmidt O, Dujesiefken D, Stobbe H, Moreth U, Kehr R, Schröder T (2008) Pseudomonas syringae pv. aesculi associated with horse chestnut bleeding canker in Germany. For Path 38: 124-128.
    • (2008) For Path , vol.38 , pp. 124-128
    • Schmidt, O.1    Dujesiefken, D.2    Stobbe, H.3    Moreth, U.4    Kehr, R.5    Schröder, T.6
  • 51
    • 0002204359 scopus 로고    scopus 로고
    • Identification of the genus Armillaria (Fr.: Fr.) Staude and Heterobasidion annosum (Fr.) Bref. in Norway spruce (Picea abies (L) Karst.) and determination of clonal distribution of A. ostoyae-genotypes by molecular methods
    • Schulze S, Bahnweg G (1998) Identification of the genus Armillaria (Fr.: Fr.) Staude and Heterobasidion annosum (Fr.) Bref. in Norway spruce (Picea abies (L) Karst.) and determination of clonal distribution of A. ostoyae-genotypes by molecular methods. Forstwiss Cbl 117: 98-114.
    • (1998) Forstwiss Cbl , vol.117 , pp. 98-114
    • Schulze, S.1    Bahnweg, G.2
  • 52
    • 0030701618 scopus 로고    scopus 로고
    • Identification techniques for Armillaria spp. and Heterobasidion annosum root and butt rot diseases
    • Schulze S, Bahnweg G, Tesche M, Sandermann H (1997) Identification techniques for Armillaria spp. and Heterobasidion annosum root and butt rot diseases. PflKrankh 104: 433-451.
    • (1997) PflKrankh , vol.104 , pp. 433-451
    • Schulze, S.1    Bahnweg, G.2    Tesche, M.3    Sandermann, H.4
  • 54
    • 27544514396 scopus 로고
    • Holzzerstörende Pilze an Straßen- und Parkbäumen in Hamburg
    • Seehann G (1979) Holzzerstörende Pilze an Straßen- und Parkbäumen in Hamburg. Mitt Dtsch Dendrol Ges 71: 193-221.
    • (1979) Mitt Dtsch Dendrol Ges , vol.71 , pp. 193-221
    • Seehann, G.1
  • 57
    • 0000055822 scopus 로고
    • Identification of wood-inhabiting aphyllophorales in pure culture
    • CBS, Barn
    • Stalpers JA (1978) Identification of wood-inhabiting aphyllophorales in pure culture. Studies Mycology 16. CBS, Barn.
    • (1978) Studies Mycology , vol.16
    • Stalpers, J.A.1
  • 58
    • 0036184065 scopus 로고    scopus 로고
    • Genetic diversity and strain-typing in cultivated strains of Lentinula edodes (the shii-take mushroom) in Japan by AFLP analysis
    • Terashima K, Matsumoto T, Hasebe K, Fukumasa-Nakai Y (2002) Genetic diversity and strain-typing in cultivated strains of Lentinula edodes (the shii-take mushroom) in Japan by AFLP analysis. Mycol Res 106: 34-39.
    • (2002) Mycol Res , vol.106 , pp. 34-39
    • Terashima, K.1    Matsumoto, T.2    Hasebe, K.3    Fukumasa-Nakai, Y.4
  • 59
    • 36348936026 scopus 로고    scopus 로고
    • Occurrence and decay patterns of common wood-decay fungi in hazardous trees felled in the Helsinki city
    • Terho M, Hantula J, Hallaksela A-M (2007) Occurrence and decay patterns of common wood-decay fungi in hazardous trees felled in the Helsinki city. For Path 37: 420-432.
    • (2007) For Path , vol.37 , pp. 420-432
    • Terho, M.1    Hantula, J.2    Hallaksela, A.-M.3
  • 60
    • 13544263394 scopus 로고    scopus 로고
    • Direct analysis of ribosomal DNA in denaturing gradients: application on the effects of Phlebiopsis gigantea treatment on fungal communities of conifer stumps
    • Vainio EJ, Hallaksela A-M, Lipponen K, Hantula J (2005) Direct analysis of ribosomal DNA in denaturing gradients: application on the effects of Phlebiopsis gigantea treatment on fungal communities of conifer stumps. Mycol Res 109: 103-114.
    • (2005) Mycol Res , vol.109 , pp. 103-114
    • Vainio, E.J.1    Hallaksela, A.-M.2    Lipponen, K.3    Hantula, J.4
  • 61
    • 0007710799 scopus 로고
    • On the identity of certain isolates of Serpula lacrymans
    • Vigrow A, Palfreyman JW, King B (1991) On the identity of certain isolates of Serpula lacrymans. Holzforschung 45: 153-154.
    • (1991) Holzforschung , vol.45 , pp. 153-154
    • Vigrow, A.1    Palfreyman, J.W.2    King, B.3
  • 63
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J. Sninisky, and T. J. White (Eds.), San Diego: Academic Press
    • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninisky JJ, White TJ (eds) PCR protocols. Academic Press, San Diego, pp 315-322.
    • (1990) PCR Protocols , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.