-
2
-
-
34248363117
-
Multiple sequence alignment with user-defined anchor points
-
Morgenstern B, Prohaska S, Pohler D, Stadler P. Multiple sequence alignment with user-defined anchor points. Algorithms for Molecular Biology. 2006;1(1):6.
-
(2006)
Algorithms For Molecular Biology
, vol.1
, Issue.1
, pp. 6
-
-
Morgenstern, B.1
Prohaska, S.2
Pohler, D.3
Stadler, P.4
-
3
-
-
34548337129
-
The majority of recent short DNA insertions in the human genome are tandem duplications
-
Messer PW, Arndt PF. The majority of recent short DNA insertions in the human genome are tandem duplications. Molecular Biology and Evolution. 2007;24:1190-7.
-
(2007)
Molecular Biology and Evolution
, vol.24
, pp. 1190-1197
-
-
Messer, P.W.1
Arndt, P.F.2
-
4
-
-
8844220452
-
STAR: An algorithm to search for tandem approxi- mate repeats
-
Delgrange O, Rivals E. STAR: an algorithm to search for tandem approxi- mate repeats. Bioinformatics. 2004;20(16):2812-20.
-
(2004)
Bioinformatics
, vol.20
, Issue.16
, pp. 2812-2820
-
-
Delgrange, O.1
Rivals, E.2
-
5
-
-
10744226741
-
Two distinct modes of microsatellite mutation processes: Evidence from the complete genomic sequences of nine species
-
Dieringer D, Schlotterer C. Two distinct modes of microsatellite mutation processes: Evidence from the complete genomic sequences of nine species. Genome Res. 2003;13:2242-51.
-
(2003)
Genome Res
, vol.13
, pp. 2242-2251
-
-
Dieringer, D.1
Schlotterer, C.2
-
7
-
-
79960103547
-
A fast and specific alignment method for minisatellite maps
-
Berard S, Nicolas F, Buard J, Gascuel O, Rivals E. A fast and specific alignment method for minisatellite maps. Evolutionary Bioinformatics. 2006;2(1):327-44.
-
(2006)
Evolutionary Bioinformatics
, vol.2
, Issue.1
, pp. 327-344
-
-
Berard, S.1
Nicolas, F.2
Buard, J.3
Gascuel, O.4
Rivals, E.5
-
8
-
-
0033555906
-
Tandem repeats finder: A program to analyze DNA sequences
-
Benson G. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 1999;27(2):573-80.
-
(1999)
Nucleic Acids Res
, vol.27
, Issue.2
, pp. 573-580
-
-
Benson, G.1
-
9
-
-
0043123037
-
Mreps: Efficient and flexible detection of tandem repeats in DNA
-
Kolpakov R, Bana G, Kucherov G. Mreps: Efficient and flexible detection of tandem repeats in DNA. Nucleic Acids Res. 2003;31(13):3672-8.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3672-3678
-
-
Kolpakov, R.1
Bana, G.2
Kucherov, G.3
-
11
-
-
25644460030
-
Finding approximate tandem repeats in genomic sequences
-
Wexler Y, Yakhini Z, Kashi Y, Geiger D. Finding approximate tandem repeats in genomic sequences. J of Comput Biol. 2005;12(7):928-42.
-
(2005)
J of Comput Biol
, vol.12
, Issue.7
, pp. 928-942
-
-
Wexler, Y.1
Yakhini, Z.2
Kashi, Y.3
Geiger, D.4
-
12
-
-
34249009076
-
Detecting microsatellites within genomes: Significant variation among algorithms
-
Leclercq S, Rivals E, Jarne P. Detecting microsatellites within genomes: significant variation among algorithms. BMC Bioinformatics. 2007;8(1):125.
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.1
, pp. 125
-
-
Leclercq, S.1
Rivals, E.2
Jarne, P.3
-
13
-
-
0030806210
-
Sequence alignment with tandem duplication
-
Benson G. Sequence alignment with tandem duplication. J Comp Biol. 1997;4:351-67.
-
(1997)
J Comp Biol
, vol.4
, pp. 351-367
-
-
Benson, G.1
-
14
-
-
33645066881
-
The wilcoxon signed rank test for paired comparisons of clustered data
-
195-92
-
Rosner B, Glynn RJ, Lee MLT. The wilcoxon signed rank test for paired comparisons of clustered data. Biometrics. 2006;62(1):195-92.
-
(2006)
Biometrics
, vol.62
, Issue.1
-
-
Rosner, B.1
Glynn, R.J.2
Lee, M.L.T.3
-
16
-
-
0025986943
-
Minisatellite repeat coding as a digital approach to DNA typing
-
Jeffreys AJ, MacLeod A, Tamaki K, Neil DL, Monck-ton DG. Minisatellite repeat coding as a digital approach to DNA typing. Nature. 1991;354: 204-9.
-
(1991)
Nature
, vol.354
, pp. 204-209
-
-
Jeffreys, A.J.1
Macleod, A.2
Tamaki, K.3
Neil, D.L.4
Monck-Ton, D.G.5
-
17
-
-
0030768930
-
Computational methods for the identification of genes in vertebrate genomic sequences
-
Claverie JM. Computational methods for the identification of genes in vertebrate genomic sequences. Human Molecular Genetics. 1997;6(10): 1735-44.
-
(1997)
Human Molecular Genetics
, vol.6
, Issue.10
, pp. 1735-1744
-
-
Claverie, J.M.1
-
18
-
-
79958797674
-
A monte carlo method for assessing the quality of duplication-aware alignment algorithms
-
Freschi V, Bogliolo A. A monte carlo method for assessing the quality of duplication-aware alignment algorithms. Evolutionary Bioinformatics. 2011;(7):31-40.
-
(2011)
Evolutionary Bioinformatics
, Issue.7
, pp. 31-40
-
-
Freschi, V.1
Bogliolo, A.2
-
19
-
-
0037028427
-
Simple and flexible detection of contiguous repeats using a suffix tree
-
Stoye J, Gusfield G. Simple and flexible detection of contiguous repeats using a suffix tree. Theoretical Computer Science. 2002;270:843-56.
-
(2002)
Theoretical Computer Science
, vol.270
, pp. 843-856
-
-
Stoye, J.1
Gusfield, G.2
-
20
-
-
34248385154
-
Mining, compressing and classifying with extensible motifs
-
Apostolico A, Comin M, Parida L. Mining, compressing and classifying with extensible motifs. Algorithms for Molecular Biology. 2006;1(1):4.
-
(2006)
Algorithms For Molecular Biology
, vol.1
, Issue.1
, pp. 4
-
-
Apostolico, A.1
Comin, M.2
Parida, L.3
-
21
-
-
34547753523
-
Compression-based classification of biological sequences and structures via the Universal Similarity Metric: Experimental assessment
-
Ferragina P, Giancarlo R, Greco V, Manzini G, Va-liente G. Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment. BMC Bioinformatics. 2007;8(1):252.
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.1
, pp. 252
-
-
Ferragina, P.1
Giancarlo, R.2
Greco, V.3
Manzini, G.4
Va-Liente, G.5
-
22
-
-
0003516147
-
-
Cambridge University Press, UK
-
Durbin R, Eddy S, Krogh A, Mitchinson G. Biological Sequence Analysis. Cambridge University Press, UK, 1998.
-
(1998)
Biological Sequence Analysis
-
-
Durbin, R.1
Eddy, S.2
Krogh, A.3
Mitchinson, G.4
|