-
1
-
-
85164903690
-
Hierarchical modeling of an invasive spread: Case of the Eurasian collared-dove Streptopelia decaocto in the USA
-
(in press)
-
Bled F, Royle JA, Cam E (2010) Hierarchical modeling of an invasive spread: case of the Eurasian collared-dove Streptopelia decaocto in the USA. Ecol Appl (in press).
-
(2010)
Ecol Appl
-
-
Bled, F.1
Royle, J.A.2
Cam, E.3
-
2
-
-
33645077857
-
An extension of the Cormack Jolly Seber model for continuous covariates with application to Microtus pennsylvanicus
-
Bonner S, Schwarz C (2006) An extension of the Cormack Jolly Seber model for continuous covariates with application to Microtus pennsylvanicus. Biometrics 62: 142-149.
-
(2006)
Biometrics
, vol.62
, pp. 142-149
-
-
Bonner, S.1
Schwarz, C.2
-
3
-
-
43749091718
-
Spatially explicit maximum likelihood methods for capture-recapture studies
-
Borchers DL, Efford MG (2008) Spatially explicit maximum likelihood methods for capture-recapture studies. Biometrics 64: 377-385.
-
(2008)
Biometrics
, vol.64
, pp. 377-385
-
-
Borchers, D.L.1
Efford, M.G.2
-
4
-
-
0018069938
-
Estimation of the size of a closed population when capture probabilities vary among animals
-
Burnham KP, Overton WS (1978) Estimation of the size of a closed population when capture probabilities vary among animals. Biometrika 65: 625-633.
-
(1978)
Biometrika
, vol.65
, pp. 625-633
-
-
Burnham, K.P.1
Overton, W.S.2
-
5
-
-
85164887246
-
Dealing with incomplete and variable detectability in multi-year, multi-site monitoring of ecological populations
-
(in press)
-
Converse SJ, Royle JA (2010) Dealing with incomplete and variable detectability in multi-year, multi-site monitoring of ecological populations. In: Design and analysis of long-term ecological monitoring studies (in press).
-
(2010)
Design and analysis of long-term ecological monitoring studies
-
-
Converse, S.J.1
Royle, J.A.2
-
7
-
-
0032946165
-
The use of mixed logit models to reflect heterogeneity in capture-recapture studies
-
Coull BA, Agresti A (1999) The use of mixed logit models to reflect heterogeneity in capture-recapture studies. Biometrics 55: 294-301.
-
(1999)
Biometrics
, vol.55
, pp. 294-301
-
-
Coull, B.A.1
Agresti, A.2
-
8
-
-
0022193474
-
Parsimonious modelling of capture-mark-recapture studies
-
Crosbie SF, Manly BFJ (1985) Parsimonious modelling of capture-mark-recapture studies. Biometrics 41: 385-398.
-
(1985)
Biometrics
, vol.41
, pp. 385-398
-
-
Crosbie, S.F.1
Manly, B.F.J.2
-
9
-
-
0037531765
-
Mixture models for estimating the size of a closed population when capture rates vary among individuals
-
Dorazio RM, Royle JA (2003) Mixture models for estimating the size of a closed population when capture rates vary among individuals. Biometrics 59: 350-363.
-
(2003)
Biometrics
, vol.59
, pp. 350-363
-
-
Dorazio, R.M.1
Royle, J.A.2
-
10
-
-
18444403930
-
Estimating size and composition of biological communities by modeling the occurrence of species
-
Dorazio RM, Royle JA (2005) Estimating size and composition of biological communities by modeling the occurrence of species. J Am Stat Assoc 100: 389-398.
-
(2005)
J Am Stat Assoc
, vol.100
, pp. 389-398
-
-
Dorazio, R.M.1
Royle, J.A.2
-
11
-
-
33646128222
-
Estimating species richness and accumulation by modeling species occurrence and detectability
-
Dorazio RM, Royle JA, Soderstrom B, Glimskar A (2006) Estimating species richness and accumulation by modeling species occurrence and detectability. Ecology 87: 842-854.
-
(2006)
Ecology
, vol.87
, pp. 842-854
-
-
Dorazio, R.M.1
Royle, J.A.2
Soderstrom, B.3
Glimskar, A.4
-
12
-
-
77955459355
-
Models for inference in dynamic metacommunity systems
-
Dorazio RM, Kéry M, Royle JA, Plattner M (2010) Models for inference in dynamic metacommunity systems. Ecology 91: 2466-2475.
-
(2010)
Ecology
, vol.91
, pp. 2466-2475
-
-
Dorazio, R.M.1
Kéry, M.2
Royle, J.A.3
Plattner, M.4
-
13
-
-
36749072150
-
A Bayesian approach to the multistate Jolly-Seber capture-recapture model
-
Dupuis JA, Schwarz CJ (2007) A Bayesian approach to the multistate Jolly-Seber capture-recapture model. Biometrics 63: 1015-1022.
-
(2007)
Biometrics
, vol.63
, pp. 1015-1022
-
-
Dupuis, J.A.1
Schwarz, C.J.2
-
14
-
-
25444452152
-
Mark-recapture with occasion and individual effects: abundance estimation through Bayesian model selection in a fixed dimensional parameter space
-
Durban JW, Elston DA (2005) Mark-recapture with occasion and individual effects: abundance estimation through Bayesian model selection in a fixed dimensional parameter space. J Agric Biol Environ Stat 10: 291-305.
-
(2005)
J Agric Biol Environ Stat
, vol.10
, pp. 291-305
-
-
Durban, J.W.1
Elston, D.A.2
-
15
-
-
4043132520
-
Density estimation in live-trapping studies
-
Efford M (2004) Density estimation in live-trapping studies. Oikos 106: 598-610.
-
(2004)
Oikos
, vol.106
, pp. 598-610
-
-
Efford, M.1
-
16
-
-
76349111837
-
Estimating black bear density using DNA data from hair snares
-
Gardner B, Royle JA, Wegan MT, Rainbolt RE, Curtis PD (2010) Estimating black bear density using DNA data from hair snares. J Wildl Manag 74: 318-325.
-
(2010)
J Wildl Manag
, vol.74
, pp. 318-325
-
-
Gardner, B.1
Royle, J.A.2
Wegan, M.T.3
Rainbolt, R.E.4
Curtis, P.D.5
-
17
-
-
78249273661
-
Spatially-explicit inference for open populations: estimating demographic parameters from camera-trap studies
-
Gardner B, Reppucci J, Lucherini M, Royle JA (2010b) Spatially-explicit inference for open populations: estimating demographic parameters from camera-trap studies. Ecology 91: 3376-3383.
-
(2010)
Ecology
, vol.91
, pp. 3376-3383
-
-
Gardner, B.1
Reppucci, J.2
Lucherini, M.3
Royle, J.A.4
-
18
-
-
34447636922
-
State-space modelling of data on marked individuals
-
Gimenez O, Rossi V, Choquet R, Dehais C, Doris B, Varella H, Vila JP, Pradel R (2007) State-space modelling of data on marked individuals. Ecol Model 206: 431-438.
-
(2007)
Ecol Model
, vol.206
, pp. 431-438
-
-
Gimenez, O.1
Rossi, V.2
Choquet, R.3
Dehais, C.4
Doris, B.5
Varella, H.6
Vila, J.P.7
Pradel, R.8
-
19
-
-
77951190231
-
Individual heterogeneity in studies on marked animals using numerical integration: capture-recapture mixed models
-
Gimenez O, Choquet R (2010) Individual heterogeneity in studies on marked animals using numerical integration: capture-recapture mixed models. Ecology 91: 148-154.
-
(2010)
Ecology
, vol.91
, pp. 148-154
-
-
Gimenez, O.1
Choquet, R.2
-
20
-
-
77956889087
-
Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
-
Green PJ (1995) Reversible jump Markov chain Monte Carlo computation and Bayesian model determination. Biometrika 82: 711-732.
-
(1995)
Biometrika
, vol.82
, pp. 711-732
-
-
Green, P.J.1
-
21
-
-
0032808670
-
The insignificance of statistical significance testing
-
Johnson DH (1999) The insignificance of statistical significance testing. J Wildl Manag 63: 763-772.
-
(1999)
J Wildl Manag
, vol.63
, pp. 763-772
-
-
Johnson, D.H.1
-
22
-
-
76549200437
-
Explicit estimates from capture-recapture data with both death and immigration-stochastic model
-
Jolly G (1965) Explicit estimates from capture-recapture data with both death and immigration-stochastic model. Biometrika 52: 225-247.
-
(1965)
Biometrika
, vol.52
, pp. 225-247
-
-
Jolly, G.1
-
23
-
-
0028977073
-
Estimating tiger (Panthera tigris) populations from camera-trap data using capture-recapture models
-
Karanth KU (1995) Estimating tiger (Panthera tigris) populations from camera-trap data using capture-recapture models. Biol Conserv 71: 333-338.
-
(1995)
Biol Conserv
, vol.71
, pp. 333-338
-
-
Karanth, K.U.1
-
24
-
-
0032406368
-
Estimation of tiger densities in India using photographic captures and recaptures
-
Karanth KU, Nichols JD (1998) Estimation of tiger densities in India using photographic captures and recaptures. Ecology 79: 2852-2862.
-
(1998)
Ecology
, vol.79
, pp. 2852-2862
-
-
Karanth, K.U.1
Nichols, J.D.2
-
25
-
-
33845389490
-
Assessing tiger population dynamics using photographic capture-recapture sampling
-
Karanth K, Nichols JD, Kumar N, Hines JE (2006) Assessing tiger population dynamics using photographic capture-recapture sampling. Ecology 87: 2925-2937.
-
(2006)
Ecology
, vol.87
, pp. 2925-2937
-
-
Karanth, K.1
Nichols, J.D.2
Kumar, N.3
Hines, J.E.4
-
26
-
-
67649963429
-
Inference about species richness and community structure using species-specific occupancy models in the National Swiss Breeding Bird Survey MHB
-
D. L. Thomson, E. G. Cooch, and M. J. Conroy (Eds.), New York: Springer
-
Kéry M, Royle JA (2009) Inference about species richness and community structure using species-specific occupancy models in the National Swiss Breeding Bird Survey MHB. In: Thomson DL, Cooch EG, Conroy MJ (eds) Modeling demographic processes in marked populations. Springer, New York, pp 639-656.
-
(2009)
Modeling Demographic Processes in Marked Populations.
, pp. 639-656
-
-
Kéry, M.1
Royle, J.A.2
-
27
-
-
66149143167
-
Species richness and occupancy estimation in communities subject to temporary emigration
-
Kéry M, Royle JA, Plattner M, Dorazio RM (2009) Species richness and occupancy estimation in communities subject to temporary emigration. Ecology 90: 1279-1290.
-
(2009)
Ecology
, vol.90
, pp. 1279-1290
-
-
Kéry, M.1
Royle, J.A.2
Plattner, M.3
Dorazio, R.M.4
-
28
-
-
0001188708
-
On the Bayesian analysis of population size
-
King R, Brooks SP (2001) On the Bayesian analysis of population size. Biometrika 88: 317-336.
-
(2001)
Biometrika
, vol.88
, pp. 317-336
-
-
King, R.1
Brooks, S.P.2
-
29
-
-
49749129588
-
On the Bayesian estimation of a closed population size in the presence of heterogeneity and model uncertainty
-
King R, Brooks SP (2008) On the Bayesian estimation of a closed population size in the presence of heterogeneity and model uncertainty. Biometrics 64: 816-824.
-
(2008)
Biometrics
, vol.64
, pp. 816-824
-
-
King, R.1
Brooks, S.P.2
-
30
-
-
56049114896
-
Analysing complex capture-recapture data in the presence of individual and temporal covariates and model uncertainty
-
King R, Brooks SP, Coulson T (2008) Analysing complex capture-recapture data in the presence of individual and temporal covariates and model uncertainty. Biometrics 64: 1187-1195.
-
(2008)
Biometrics
, vol.64
, pp. 1187-1195
-
-
King, R.1
Brooks, S.P.2
Coulson, T.3
-
31
-
-
85164885826
-
A new aerial survey design to monitor manatee abundance for Everglades restoration
-
(in press)
-
Langtimm CA, Dorazio RM, Stith BM, Doyle TJ (2010) A new aerial survey design to monitor manatee abundance for Everglades restoration. J Wildl Manag (in press).
-
(2010)
J Wildl Manag
-
-
Langtimm, C.A.1
Dorazio, R.M.2
Stith, B.M.3
Doyle, T.J.4
-
32
-
-
0026490966
-
Modeling survival and testing biological hypotheses using marked animals: a unified approach with case studies
-
Lebreton JD, Burnham K, Clobert J, Anderson DR (1992) Modeling survival and testing biological hypotheses using marked animals: a unified approach with case studies. Ecol Monogr 62: 67-118.
-
(1992)
Ecol Monogr
, vol.62
, pp. 67-118
-
-
Lebreton, J.D.1
Burnham, K.2
Clobert, J.3
Anderson, D.R.4
-
33
-
-
0346102884
-
Nonidentifiability of population size from capture-recapture data with heterogeneous detection probabilities
-
Link WA (2003) Nonidentifiability of population size from capture-recapture data with heterogeneous detection probabilities. Biometrics 59: 1123-1130.
-
(2003)
Biometrics
, vol.59
, pp. 1123-1130
-
-
Link, W.A.1
-
35
-
-
0442309501
-
Parameter expansion for data augmentation
-
Liu JS, Wu YN (1999) Parameter expansion for data augmentation. J Am Stat Assoc 94: 1264-1274.
-
(1999)
J Am Stat Assoc
, vol.94
, pp. 1264-1274
-
-
Liu, J.S.1
Wu, Y.N.2
-
36
-
-
70449411807
-
The BUGS project: evolution, critique and future directions (with discussion)
-
Lunn D, Spiegelhalter D, Thomas A, Best N (2009) The BUGS project: evolution, critique and future directions (with discussion). Stat Med 28: 3049-3082.
-
(2009)
Stat Med
, vol.28
, pp. 3049-3082
-
-
Lunn, D.1
Spiegelhalter, D.2
Thomas, A.3
Best, N.4
-
37
-
-
0000989596
-
Estimating site occupancy rates when detection probabilities are less than one
-
MacKenzie DI, Nichols JD, Lachman GB, Droege S, Royle JA, Langtimm CA (2002) Estimating site occupancy rates when detection probabilities are less than one. Ecology 83: 2248-2255.
-
(2002)
Ecology
, vol.83
, pp. 2248-2255
-
-
Mackenzie, D.I.1
Nichols, J.D.2
Lachman, G.B.3
Droege, S.4
Royle, J.A.5
Langtimm, C.A.6
-
38
-
-
0344585053
-
Estimating site occupancy, colonization, and local extinction when a species is detected imperfectly
-
MacKenzie DI, Nichols JD, Hines JE, Knutson MG, Franklin AB (2003) Estimating site occupancy, colonization, and local extinction when a species is detected imperfectly. Ecology 84: 2200-2207.
-
(2003)
Ecology
, vol.84
, pp. 2200-2207
-
-
Mackenzie, D.I.1
Nichols, J.D.2
Hines, J.E.3
Knutson, M.G.4
Franklin, A.B.5
-
40
-
-
77954196403
-
PyMC 2. 0: Bayesian stochastic modelling in python
-
(in press)
-
Patil A, Huard D, Fonnesbeck CJ (2010) PyMC 2. 0: Bayesian stochastic modelling in python. J Stat Softw (in press).
-
(2010)
J Stat Softw
-
-
Patil, A.1
Huard, D.2
Fonnesbeck, C.J.3
-
41
-
-
27744546446
-
The performance of mixture models in heterogeneous closed population capture-recapture
-
Pledger S (2005) The performance of mixture models in heterogeneous closed population capture-recapture. Biometrics 61: 868-873.
-
(2005)
Biometrics
, vol.61
, pp. 868-873
-
-
Pledger, S.1
-
42
-
-
0347994088
-
Open capture-recapture models with heterogeneity: I. Cormack-Jolly-Seber model
-
Pledger S, Pollock KH, Norris JL (2003) Open capture-recapture models with heterogeneity: I. Cormack-Jolly-Seber model. Biometrics 59: 786-794.
-
(2003)
Biometrics
, vol.59
, pp. 786-794
-
-
Pledger, S.1
Pollock, K.H.2
Norris, J.L.3
-
43
-
-
0001281173
-
A capture-recapture design robust to unequal probability of capture
-
Pollock K (1982) A capture-recapture design robust to unequal probability of capture. J Wildl Manag 46: 757-760.
-
(1982)
J Wildl Manag
, vol.46
, pp. 757-760
-
-
Pollock, K.1
-
44
-
-
33645046882
-
Site occupancy models with heterogeneous detection probabilities
-
Royle JA (2006) Site occupancy models with heterogeneous detection probabilities. Biometrics 62: 97-102.
-
(2006)
Biometrics
, vol.62
, pp. 97-102
-
-
Royle, J.A.1
-
45
-
-
43749112747
-
Modeling individual effects in the Cormack-Jolly-Seber model: a state-space formulation
-
Royle JA (2008) Modeling individual effects in the Cormack-Jolly-Seber model: a state-space formulation. Biometrics 64: 364-370.
-
(2008)
Biometrics
, vol.64
, pp. 364-370
-
-
Royle, J.A.1
-
46
-
-
62949101184
-
Analysis of capture-recapture models with individual covariates using data augmentation
-
Royle JA (2009) Analysis of capture-recapture models with individual covariates using data augmentation. Biometrics 65: 267-274.
-
(2009)
Biometrics
, vol.65
, pp. 267-274
-
-
Royle, J.A.1
-
47
-
-
34248583853
-
A Bayesian state-space formulation of dynamic occupancy models
-
Royle JA, Kéry M (2007) A Bayesian state-space formulation of dynamic occupancy models. Ecology 88: 1813-1823.
-
(2007)
Ecology
, vol.88
, pp. 1813-1823
-
-
Royle, J.A.1
Kéry, M.2
-
48
-
-
34147204415
-
Analysis of multinomial models with unknown index using data augmentation
-
Royle JA, Dorazio RM, Link WA (2007) Analysis of multinomial models with unknown index using data augmentation. J Comput Graph Stat 16: 67-85.
-
(2007)
J Comput Graph Stat
, vol.16
, pp. 67-85
-
-
Royle, J.A.1
Dorazio, R.M.2
Link, W.A.3
-
50
-
-
76349098099
-
Hierarchical spatial capture-recapture models for estimating density from trapping arrays
-
In: O'Connell AF, Nichols JD, Karanth KU (eds) Springer, Berlin
-
Royle JA, Gardner B (2010) Hierarchical spatial capture-recapture models for estimating density from trapping arrays. In: O'Connell AF, Nichols JD, Karanth KU (eds) Camera traps in animal ecology: methods and analyses. Springer, Berlin.
-
(2010)
Camera traps in animal ecology: Methods and analyses
-
-
Royle, J.A.1
Gardner, B.2
-
51
-
-
54549109981
-
A hierarchical model for spatial capture-recapture data
-
Royle JA, Young KV (2008) A hierarchical model for spatial capture-recapture data. Ecology 89: 2281-2289.
-
(2008)
Ecology
, vol.89
, pp. 2281-2289
-
-
Royle, J.A.1
Young, K.V.2
-
52
-
-
72449210568
-
Bayesian inference in camera trap studies using a class of spatial capture-recapture models
-
Royle JA, Karanth KU, Gopalaswamy AM, Kumar NS (2009) Bayesian inference in camera trap studies using a class of spatial capture-recapture models. Ecology 90: 3233-3244.
-
(2009)
Ecology
, vol.90
, pp. 3233-3244
-
-
Royle, J.A.1
Karanth, K.U.2
Gopalaswamy, A.M.3
Kumar, N.S.4
-
53
-
-
0029659257
-
A general methodology for the analysis of capture-recapture experiments in open populations
-
Schwarz C, Arnason A (1996) A general methodology for the analysis of capture-recapture experiments in open populations. Biometrics 52: 860-873.
-
(1996)
Biometrics
, vol.52
, pp. 860-873
-
-
Schwarz, C.1
Arnason, A.2
-
55
-
-
76549219043
-
A note on the multiple-recapture census
-
Seber G (1965) A note on the multiple-recapture census. Biometrika 52: 249-59.
-
(1965)
Biometrika
, vol.52
, pp. 249-259
-
-
Seber, G.1
-
57
-
-
84950758368
-
The calculation of posterior distributions by data augmentation
-
Tanner MA, Wong WH (1987) The calculation of posterior distributions by data augmentation. J Am Stat Assoc 82: 528-540.
-
(1987)
J Am Stat Assoc
, vol.82
, pp. 528-540
-
-
Tanner, M.A.1
Wong, W.H.2
-
59
-
-
70349237421
-
Incorporating genotype uncertainty into mark-recapture-type models for estimating abundance using DNA samples
-
Wright JA, Barker RJ, Schofield MR, Frantz AC, Byrom AE, Gleeson DM (2009) Incorporating genotype uncertainty into mark-recapture-type models for estimating abundance using DNA samples. Biometrics 65: 833-840.
-
(2009)
Biometrics
, vol.65
, pp. 833-840
-
-
Wright, J.A.1
Barker, R.J.2
Schofield, M.R.3
Frantz, A.C.4
Byrom, A.E.5
Gleeson, D.M.6
|