-
1
-
-
33745150038
-
Evolutionary history of HIV-1 subtype B and F infections in Brazil
-
Bello G, Guimaraes ML, Morgado MG, (2006) Evolutionary history of HIV-1 subtype B and F infections in Brazil. AIDS 20: 763-768.
-
(2006)
AIDS
, vol.20
, pp. 763-768
-
-
Bello, G.1
Guimaraes, M.L.2
Morgado, M.G.3
-
2
-
-
58149119452
-
Short communication: Molecular characterization of HIV type 1 BF pol recombinants from Sao Paulo, Brazil
-
de Souza AC, de Oliveira CM, Rodrigues CL, Silva SA, Levi JE, (2008) Short communication: Molecular characterization of HIV type 1 BF pol recombinants from Sao Paulo, Brazil. AIDS Res Hum Retroviruses 24: 1521-1525.
-
(2008)
AIDS Res Hum Retroviruses
, vol.24
, pp. 1521-1525
-
-
de Souza, A.C.1
de Oliveira, C.M.2
Rodrigues, C.L.3
Silva, S.A.4
Levi, J.E.5
-
3
-
-
33745657069
-
Analysis of the near full length genomes of HIV-1 subtypes B, F and BF recombinant from a cohort of 14 patients in Sao Paulo, Brazil
-
Sanabani S, Kleine Neto W, Kalmar EM, Diaz RS, Janini LM, et al. (2006) Analysis of the near full length genomes of HIV-1 subtypes B, F and BF recombinant from a cohort of 14 patients in Sao Paulo, Brazil. Infect Genet Evol 6: 368-377.
-
(2006)
Infect Genet Evol
, vol.6
, pp. 368-377
-
-
Sanabani, S.1
Kleine Neto, W.2
Kalmar, E.M.3
Diaz, R.S.4
Janini, L.M.5
-
4
-
-
77952574031
-
The role of recombination in the emergence of a complex and dynamic HIV epidemic
-
Zhang M, Foley B, Schultz AK, Macke JP, Bulla I, et al. (2010) The role of recombination in the emergence of a complex and dynamic HIV epidemic. Retrovirology 7: 25.
-
(2010)
Retrovirology
, vol.7
, pp. 25
-
-
Zhang, M.1
Foley, B.2
Schultz, A.K.3
Macke, J.P.4
Bulla, I.5
-
5
-
-
35348979734
-
Drug resistance among chronic HIV-1-infected patients naive for use of anti-retroviral therapy in Sao Paulo city
-
Gonsalez CR, Alcalde R, Nishiya A, Barreto CC, Silva FE, et al. (2007) Drug resistance among chronic HIV-1-infected patients naive for use of anti-retroviral therapy in Sao Paulo city. Virus Res 129: 87-90.
-
(2007)
Virus Res
, vol.129
, pp. 87-90
-
-
Gonsalez, C.R.1
Alcalde, R.2
Nishiya, A.3
Barreto, C.C.4
Silva, F.E.5
-
6
-
-
32044453536
-
Identification of two HIV type 1 circulating recombinant forms in Brazil
-
De Sa Filho DJ, Sucupira MC, Caseiro MM, Sabino EC, Diaz RS, et al. (2006) Identification of two HIV type 1 circulating recombinant forms in Brazil. AIDS Res Hum Retroviruses 22: 1-13.
-
(2006)
AIDS Res Hum Retroviruses
, vol.22
, pp. 1-13
-
-
De Sa Filho, D.J.1
Sucupira, M.C.2
Caseiro, M.M.3
Sabino, E.C.4
Diaz, R.S.5
-
7
-
-
14844357223
-
Analysis of full-length human immunodeficiency virus type 1 genome reveals a variable spectrum of subtypes B and f recombinants in Sao Paulo, Brazil
-
Sa Filho DJ, Sanabani S, Diaz RS, Munerato P, Brunstein A, et al. (2005) Analysis of full-length human immunodeficiency virus type 1 genome reveals a variable spectrum of subtypes B and f recombinants in Sao Paulo, Brazil. AIDS Res Hum Retroviruses 21: 145-151.
-
(2005)
AIDS Res Hum Retroviruses
, vol.21
, pp. 145-151
-
-
Sa Filho, D.J.1
Sanabani, S.2
Diaz, R.S.3
Munerato, P.4
Brunstein, A.5
-
8
-
-
33244466324
-
Full-length genome analysis of human immunodeficiency virus type 1 subtype C in Brazil
-
Sanabani S, Neto WK, de Sa Filho DJ, Diaz RS, Munerato P, et al. (2006) Full-length genome analysis of human immunodeficiency virus type 1 subtype C in Brazil. AIDS Res Hum Retroviruses 22: 171-176.
-
(2006)
AIDS Res Hum Retroviruses
, vol.22
, pp. 171-176
-
-
Sanabani, S.1
Neto, W.K.2
de Sa Filho, D.J.3
Diaz, R.S.4
Munerato, P.5
-
9
-
-
34147136222
-
Safety and efficacy of the HIV-1 integrase inhibitor raltegravir (MK-0518) in treatment-experienced patients with multidrug-resistant virus: a phase II randomised controlled trial
-
Grinsztejn B, Nguyen BY, Katlama C, Gatell JM, Lazzarin A, et al. (2007) Safety and efficacy of the HIV-1 integrase inhibitor raltegravir (MK-0518) in treatment-experienced patients with multidrug-resistant virus: a phase II randomised controlled trial. Lancet 369: 1261-1269.
-
(2007)
Lancet
, vol.369
, pp. 1261-1269
-
-
Grinsztejn, B.1
Nguyen, B.Y.2
Katlama, C.3
Gatell, J.M.4
Lazzarin, A.5
-
10
-
-
33748113778
-
Antiviral activity, pharmacokinetics, and dose response of the HIV-1 integrase inhibitor GS-9137 (JTK-303) in treatment-naive and treatment-experienced patients
-
DeJesus E, Berger D, Markowitz M, Cohen C, Hawkins T, et al. (2006) Antiviral activity, pharmacokinetics, and dose response of the HIV-1 integrase inhibitor GS-9137 (JTK-303) in treatment-naive and treatment-experienced patients. J Acquir Immune Defic Syndr 43: 1-5.
-
(2006)
J Acquir Immune Defic Syndr
, vol.43
, pp. 1-5
-
-
DeJesus, E.1
Berger, D.2
Markowitz, M.3
Cohen, C.4
Hawkins, T.5
-
11
-
-
0026649557
-
Identification of conserved amino acid residues critical for human immunodeficiency virus type 1 integrase function in vitro
-
Engelman A, Craigie R, (1992) Identification of conserved amino acid residues critical for human immunodeficiency virus type 1 integrase function in vitro. J Virol 66: 6361-6369.
-
(1992)
J Virol
, vol.66
, pp. 6361-6369
-
-
Engelman, A.1
Craigie, R.2
-
12
-
-
0026719238
-
Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases
-
Kulkosky J, Jones KS, Katz RA, Mack JP, Skalka AM, (1992) Residues critical for retroviral integrative recombination in a region that is highly conserved among retroviral/retrotransposon integrases and bacterial insertion sequence transposases. Mol Cell Biol 12: 2331-2338.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 2331-2338
-
-
Kulkosky, J.1
Jones, K.S.2
Katz, R.A.3
Mack, J.P.4
Skalka, A.M.5
-
14
-
-
34447263572
-
Natural polymorphism of the HIV-1 integrase gene and mutations associated with integrase inhibitor resistance
-
Lataillade M, Chiarella J, Kozal MJ, (2007) Natural polymorphism of the HIV-1 integrase gene and mutations associated with integrase inhibitor resistance. Antivir Ther 12: 563-570.
-
(2007)
Antivir Ther
, vol.12
, pp. 563-570
-
-
Lataillade, M.1
Chiarella, J.2
Kozal, M.J.3
-
15
-
-
42049119625
-
Mutations associated with failure of raltegravir treatment affect integrase sensitivity to the inhibitor in vitro
-
Malet I, Delelis O, Valantin MA, Montes B, Soulie C, et al. (2008) Mutations associated with failure of raltegravir treatment affect integrase sensitivity to the inhibitor in vitro. Antimicrob Agents Chemother 52: 1351-1358.
-
(2008)
Antimicrob Agents Chemother
, vol.52
, pp. 1351-1358
-
-
Malet, I.1
Delelis, O.2
Valantin, M.A.3
Montes, B.4
Soulie, C.5
-
16
-
-
84859233659
-
-
Ministério da Saúde do Brasil, Secretaria de Vigilância em Saúde, Programa Nacional de DST e AIDS, Ano VII n0 01 01/12/2010 ed: Brasília
-
Ministério da Saúde do Brasil, Secretaria de Vigilância em Saúde, Programa Nacional de DST e AIDS (2010) Boletim Epidemiológico. Ano VII n0 01 01/12/2010 ed: Brasília.
-
(2010)
Boletim Epidemiológico
-
-
-
17
-
-
73149110870
-
Near full-length genome characterization of HIV type 1 unique BC recombinant forms from Southern Brazil
-
Passaes CP, Guimaraes ML, Bello G, Morgado MG, (2009) Near full-length genome characterization of HIV type 1 unique BC recombinant forms from Southern Brazil. AIDS Res Hum Retroviruses 25: 1339-1344.
-
(2009)
AIDS Res Hum Retroviruses
, vol.25
, pp. 1339-1344
-
-
Passaes, C.P.1
Guimaraes, M.L.2
Bello, G.3
Morgado, M.G.4
-
18
-
-
76449113233
-
Genetic diversity on the integrase region of the pol gene among HIV type 1-infected patients naive for integrase inhibitors in Sao Paulo City, Brazil
-
Arruda LB, Fonseca LA, Duarte AJ, Casseb J, (2010) Genetic diversity on the integrase region of the pol gene among HIV type 1-infected patients naive for integrase inhibitors in Sao Paulo City, Brazil. AIDS Res Hum Retroviruses 26: 105-107.
-
(2010)
AIDS Res Hum Retroviruses
, vol.26
, pp. 105-107
-
-
Arruda, L.B.1
Fonseca, L.A.2
Duarte, A.J.3
Casseb, J.4
-
19
-
-
70349275985
-
Use of massive parallel pyrosequencing for near full-length characterization of a unique HIV Type 1 BF recombinant associated with a fatal primary infection
-
Bruselles A, Rozera G, Bartolini B, Prosperi M, Del Nonno F, et al. (2009) Use of massive parallel pyrosequencing for near full-length characterization of a unique HIV Type 1 BF recombinant associated with a fatal primary infection. AIDS Res Hum Retroviruses 25: 937-942.
-
(2009)
AIDS Res Hum Retroviruses
, vol.25
, pp. 937-942
-
-
Bruselles, A.1
Rozera, G.2
Bartolini, B.3
Prosperi, M.4
Del Nonno, F.5
-
20
-
-
41749092280
-
Boosting virology in Brazil
-
Pardini MI, Jamal LF, Durigon EL, Massad E, Perez JF, et al. (2008) Boosting virology in Brazil. PLoS Biol 6: e57.
-
(2008)
PLoS Biol
, vol.6
-
-
Pardini, M.I.1
Jamal, L.F.2
Durigon, E.L.3
Massad, E.4
Perez, J.F.5
-
21
-
-
53049097137
-
A genotypic assay for the amplification and sequencing of integrase from diverse HIV-1 group M subtypes
-
Van Laethem K, Schrooten Y, Covens K, Dekeersmaeker N, De Munter P, et al. (2008) A genotypic assay for the amplification and sequencing of integrase from diverse HIV-1 group M subtypes. J Virol Methods 153: 176-181.
-
(2008)
J Virol Methods
, vol.153
, pp. 176-181
-
-
Van Laethem, K.1
Schrooten, Y.2
Covens, K.3
Dekeersmaeker, N.4
De Munter, P.5
-
22
-
-
33746715541
-
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
-
Schultz AK, Zhang M, Leitner T, Kuiken C, Korber B, et al. (2006) A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes. BMC Bioinformatics 7: 265.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 265
-
-
Schultz, A.K.1
Zhang, M.2
Leitner, T.3
Kuiken, C.4
Korber, B.5
-
23
-
-
33747863901
-
jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1
-
Zhang M, Schultz AK, Calef C, Kuiken C, Leitner T, et al. (2006) jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1. Nucleic Acids Res 34: W463-W465.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Zhang, M.1
Schultz, A.K.2
Calef, C.3
Kuiken, C.4
Leitner, T.5
-
24
-
-
67849084998
-
jpHMM: Improving the reliability of recombination prediction in HIV-1
-
Schultz AK, Zhang M, Bulla I, Leitner T, Korber B, et al. (2009) jpHMM: Improving the reliability of recombination prediction in HIV-1. Nucleic Acids Res 37: W647-W651.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Schultz, A.K.1
Zhang, M.2
Bulla, I.3
Leitner, T.4
Korber, B.5
-
26
-
-
33748879209
-
Rationale and uses of a public HIV drug-resistance database
-
Shafer RW, (2006) Rationale and uses of a public HIV drug-resistance database. J Infect Dis 194 (Suppl 1): S51-58.
-
(2006)
J Infect Dis
, vol.194
, Issue.SUPPL. 1
-
-
Shafer, R.W.1
-
27
-
-
33748770095
-
Automated phylogenetic detection of recombination using a genetic algorithm
-
Pond SLK, Posada D, Gravenor MB, Woelk CH, Frost SDW, (2006) Automated phylogenetic detection of recombination using a genetic algorithm. Mol Bio Evol 23: 1891-1901.
-
(2006)
Mol Bio Evol
, vol.23
, pp. 1891-1901
-
-
Pond, S.L.K.1
Posada, D.2
Gravenor, M.B.3
Woelk, C.H.4
Frost, S.D.W.5
-
28
-
-
68449092202
-
Architecture and secondary structure of an entire HIV-1 RNA genome
-
Watts JM, Dang KK, Gorelick RJ, Leonard CW, Bess JW Jr, et al. (2009) Architecture and secondary structure of an entire HIV-1 RNA genome. Nature 460: 711-716.
-
(2009)
Nature
, vol.460
, pp. 711-716
-
-
Watts, J.M.1
Dang, K.K.2
Gorelick, R.J.3
Leonard, C.W.4
Bess Jr., J.W.5
-
29
-
-
65549085822
-
Characterization and structural analysis of HIV-1 integrase conservation
-
Ceccherini-Silberstein F, Malet I, D'Arrigo R, Antinori A, Marcelin AG, et al. (2009) Characterization and structural analysis of HIV-1 integrase conservation. AIDS Rev 11: 17-29.
-
(2009)
AIDS Rev
, vol.11
, pp. 17-29
-
-
Ceccherini-Silberstein, F.1
Malet, I.2
D'Arrigo, R.3
Antinori, A.4
Marcelin, A.G.5
-
30
-
-
78149434355
-
The mechanism of retroviral integration from X-ray structures of its key intermediates
-
Maertens GN, Hare S, Cherepanov P, (2010) The mechanism of retroviral integration from X-ray structures of its key intermediates. Nature 468: 326-329.
-
(2010)
Nature
, vol.468
, pp. 326-329
-
-
Maertens, G.N.1
Hare, S.2
Cherepanov, P.3
-
31
-
-
0035947289
-
HIV-1 infection requires a functional integrase NLS
-
Bouyac-Bertoia M, Dvorin JD, Fouchier RA, Jenkins Y, Meyer BE, et al. (2001) HIV-1 infection requires a functional integrase NLS. Mol Cell 7: 1025-1035.
-
(2001)
Mol Cell
, vol.7
, pp. 1025-1035
-
-
Bouyac-Bertoia, M.1
Dvorin, J.D.2
Fouchier, R.A.3
Jenkins, Y.4
Meyer, B.E.5
-
32
-
-
0141730444
-
In vivo characteristics of human immunodeficiency virus type 1 intersubtype recombination: determination of hot spots and correlation with sequence similarity
-
Magiorkinis G, Paraskevis D, Vandamme AM, Magiorkinis E, Sypsa V, et al. (2003) In vivo characteristics of human immunodeficiency virus type 1 intersubtype recombination: determination of hot spots and correlation with sequence similarity. J Gen Virol 84: 2715-2722.
-
(2003)
J Gen Virol
, vol.84
, pp. 2715-2722
-
-
Magiorkinis, G.1
Paraskevis, D.2
Vandamme, A.M.3
Magiorkinis, E.4
Sypsa, V.5
-
33
-
-
30944461040
-
Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update
-
Thomson MM, Najera R, (2005) Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update. AIDS Rev 7: 210-224.
-
(2005)
AIDS Rev
, vol.7
, pp. 210-224
-
-
Thomson, M.M.1
Najera, R.2
-
34
-
-
0002583297
-
Global Diversity in HIV
-
In: Crandall KA, editors, Baltimore, The Johns Hopkins University Press
-
McCutchan FE, (1999) Global Diversity in HIV. In: Crandall KA, editors. The evolution of HIV Baltimore The Johns Hopkins University Press pp. 41-104.
-
(1999)
The Evolution of HIV
, pp. 41-104
-
-
McCutchan, F.E.1
|