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Volumn 136, Issue 11, 2012, Pages

Influence of environment induced correlated fluctuations in electronic coupling on coherent excitation energy transfer dynamics in model photosynthetic systems

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOCHLOROPHYLLS; COHERENCE ENHANCEMENT; COHERENT DYNAMICS; COHERENT ENERGY TRANSFER; COHERENT EXCITATIONS; CORRELATED FLUCTUATIONS; DECOHERENCE; DECOHERENCE TIME; DISSIPATIVE QUANTUM DYNAMICS; ELECTRONIC COUPLING; ENERGY CORRELATION; ENERGY-TRANSFER RATE; FEMTOSECONDS; GENERAL METHOD; GENERAL MODEL; LARGE SCALE PROTEINS; LIGHT HARVESTING COMPLEXES; MODEL LIGHT; MOLECULAR DYNAMICS SIMULATIONS; PHOTOSYNTHETIC SYSTEMS; PURPLE BACTERIA; REACTION CENTER; RHODOBACTER SPHAEROIDES; THREE-STATE MODELS; TRANSFER RATES; TRANSFER TIME; TWO-STATE MODEL;

EID: 84859244643     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3693019     Document Type: Article
Times cited : (53)

References (95)
  • 1
    • 34250185415 scopus 로고    scopus 로고
    • Coherence dynamics in photosynthesis: Protein protection of excitonic coherence
    • DOI 10.1126/science.1142188
    • H. Lee, Y.-C. Cheng, and G. R. Fleming, Science 316, 1462 (2007). 10.1126/science.1142188 (Pubitemid 46906609)
    • (2007) Science , vol.316 , Issue.5830 , pp. 1462-1465
    • Lee, H.1    Cheng, Y.-C.2    Fleming, G.R.3
  • 7
    • 58449086151 scopus 로고    scopus 로고
    • 10.1126/science.1164016
    • E. Collini and G. D. Scholes, Science 323, 369 (2009). 10.1126/science.1164016
    • (2009) Science , vol.323 , pp. 369
    • Collini, E.1    Scholes, G.D.2
  • 10
    • 35148838654 scopus 로고    scopus 로고
    • Dynamics of a multimode system coupled to multiple heat baths probed by two-dimensional infrared spectroscopy
    • DOI 10.1021/jp072880a
    • A. Ishizaki and Y. Tanimura, J. Phys. Chem. A 111, 9296 (2007). 10.1021/jp072880a (Pubitemid 47548315)
    • (2007) Journal of Physical Chemistry A , vol.111 , Issue.38 , pp. 9269-9276
    • Ishizaki, A.1    Tanimura, Y.2
  • 11
    • 77952677678 scopus 로고    scopus 로고
    • 10.1088/1367-2630/12/5/055005
    • A. G. Dijkstra and Y. Tanimura, New J. Phys. 12, 055005 (2010). 10.1088/1367-2630/12/5/055005
    • (2010) New J. Phys. , vol.12 , pp. 055005
    • Dijkstra, A.G.1    Tanimura, Y.2
  • 18
    • 33749521844 scopus 로고    scopus 로고
    • How proteins trigger excitation energy transfer in the FMO complex of green sulfur bacteria
    • DOI 10.1529/biophysj.105.079483
    • J. Adolphs and T. Renger, Biophys. J. 91, 2778 (2006). 10.1529/biophysj.105.079483 (Pubitemid 44526469)
    • (2006) Biophysical Journal , vol.91 , Issue.8 , pp. 2778-2797
    • Adolphs, J.1    Renger, T.2
  • 23
    • 69249108844 scopus 로고    scopus 로고
    • 10.1088/1367-2630/11/8/085001
    • P. Nalbach and M. Thorwart, New J. Phys. 11, 085001 (2009); 10.1088/1367-2630/11/8/085001
    • (2009) New J. Phys. , vol.11 , pp. 085001
    • Nalbach, P.1    Thorwart, M.2
  • 24
    • 77955079075 scopus 로고    scopus 로고
    • 10.1088/1367-2630/12/6/065043
    • P. Nalbach and M. Thorwart, New J. Phys. 12, 194111 (2010). 10.1088/1367-2630/12/6/065043
    • (2010) New J. Phys. , vol.12 , pp. 194111
    • Nalbach, P.1    Thorwart, M.2
  • 26
    • 77956565396 scopus 로고    scopus 로고
    • 10.1088/1367-2630/12/8/085006
    • F. Fassioli and A. Olaya-Castro, New J. Phys. 12, 085006 (2010). 10.1088/1367-2630/12/8/085006
    • (2010) New J. Phys. , vol.12 , pp. 085006
    • Fassioli, F.1    Olaya-Castro, A.2
  • 28
    • 77952688137 scopus 로고    scopus 로고
    • 10.1088/1367-2630/12/5/055004
    • A. Ishizaki and G. R. Fleming, New J. Phys. 12, 055004 (2010). 10.1088/1367-2630/12/5/055004
    • (2010) New J. Phys. , vol.12 , pp. 055004
    • Ishizaki, A.1    Fleming, G.R.2
  • 29
    • 72049087255 scopus 로고    scopus 로고
    • 10.1063/1.3247899
    • S. Jang, J. Chem. Phys. 131, 164101 (2009); 10.1063/1.3247899
    • (2009) J. Chem. Phys. , vol.131 , pp. 164101
    • Jang, S.1
  • 33
    • 35948996110 scopus 로고    scopus 로고
    • Generalization of the Förster resonance energy transfer theory for quantum mechanical modulation of the donor-acceptor coupling
    • DOI 10.1063/1.2779031
    • S. Jang, J. Chem. Phys. 127, 174710 (2007). 10.1063/1.2779031 (Pubitemid 350075546)
    • (2007) Journal of Chemical Physics , vol.127 , Issue.17 , pp. 174710
    • Jang, S.1
  • 34
    • 77953064853 scopus 로고    scopus 로고
    • 10.1063/1.3435211
    • X. Chen and R. J. Silbey, J. Chem. Phys. 132, 204503 (2010). 10.1063/1.3435211
    • (2010) J. Chem. Phys. , vol.132 , pp. 204503
    • Chen, X.1    Silbey, R.J.2
  • 37
    • 0032398445 scopus 로고    scopus 로고
    • Quantum time correlation functions and classical coherence
    • DOI 10.1016/S0301-0104(98)00027-5
    • R. Hernandez and G. A. Voth, Chem. Phys. 223, 243 (1998); 10.1016/S0301-0104(98)00027-5 (Pubitemid 128111762)
    • (1998) Chemical Physics , vol.233 , Issue.2-3 , pp. 243-255
    • Hernandez, R.1    Voth, G.A.2
  • 41
    • 0242609133 scopus 로고    scopus 로고
    • 10.1021/jp030497+
    • Q. Shi and E. Geva, J. Phys. Chem. A 107, 9059 (2003); 10.1021/jp030497+
    • (2003) J. Phys. Chem. A , vol.107 , pp. 9059
    • Shi, Q.1    Geva, E.2
  • 42
    • 0037799718 scopus 로고    scopus 로고
    • 10.1063/1.1564814
    • Q. Shi and E. Geva, J. Chem. Phys. 118, 8173 (2003); 10.1063/1.1564814
    • (2003) J. Chem. Phys. , vol.118 , pp. 8173
    • Shi, Q.1    Geva, E.2
  • 43
    • 0344898992 scopus 로고    scopus 로고
    • 10.1063/1.1613636
    • Q. Shi and E. Geva, J. Chem. Phys. 119, 9030 (2003); 10.1063/1.1613636
    • (2003) J. Chem. Phys. , vol.119 , pp. 9030
    • Shi, Q.1    Geva, E.2
  • 44
    • 0038060717 scopus 로고    scopus 로고
    • 10.1063/1.1562611
    • Q. Shi and E. Geva, J. Chem. Phys. 118, 7562 (2003). 10.1063/1.1562611
    • (2003) J. Chem. Phys. , vol.118 , pp. 7562
    • Shi, Q.1    Geva, E.2
  • 45
    • 46149100304 scopus 로고    scopus 로고
    • 10.1063/1.2944270
    • Z. Ma and D. F. Coker, J. Chem. Phys. 128, 244108 (2008). 10.1063/1.2944270
    • (2008) J. Chem. Phys. , vol.128 , pp. 244108
    • Ma, Z.1    Coker, D.F.2
  • 48
    • 0003081433 scopus 로고    scopus 로고
    • 10.1103/PhysRevLett.78.578
    • G. Stock and M. Thoss, Phys. Rev. Lett. 78, 578 (1997); 10.1103/PhysRevLett.78.578
    • (1997) Phys. Rev. Lett. , vol.78 , pp. 578
    • Stock, G.1    Thoss, M.2
  • 49
    • 0002738928 scopus 로고    scopus 로고
    • 10.1103/PhysRevA.59.64
    • M. Thoss and G. Stock, Phys. Rev. A 59, 64 (1999); 10.1103/PhysRevA.59.64
    • (1999) Phys. Rev. A , vol.59 , pp. 64
    • Thoss, M.1    Stock, G.2
  • 50
    • 0035826665 scopus 로고    scopus 로고
    • A semiclassical limit for the mapping Hamiltonian approach to electronically nonadiabatic dynamics
    • DOI 10.1063/1.1366331
    • S. Bonella, and D. F. Coker, J. Chem. Phys. 114, 7778 (2001); 10.1063/1.1366331 (Pubitemid 32486691)
    • (2001) Journal of Chemical Physics , vol.114 , Issue.18 , pp. 7778-7789
    • Bonella, S.1    Coker, D.F.2
  • 52
    • 82555186536 scopus 로고    scopus 로고
    • 10.1063/1.3664763
    • P. Huo and D. F. Coker, J. Chem. Phys. 135, 201101 (2011). 10.1063/1.3664763
    • (2011) J. Chem. Phys. , vol.135 , pp. 201101
    • Huo, P.1    Coker, D.F.2
  • 54
    • 21444433787 scopus 로고    scopus 로고
    • LAND-map, a linearized approach to nonadiabatic dynamics using the mapping formalism
    • DOI 10.1063/1.1896948, 194102
    • S. Bonella and D. F. Coker, J. Chem. Phys. 122, 194102 (2005); 10.1063/1.1896948 (Pubitemid 40914299)
    • (2005) Journal of Chemical Physics , vol.122 , Issue.19 , pp. 1-13
    • Bonella, S.1    Coker, D.F.2
  • 56
    • 78449295531 scopus 로고    scopus 로고
    • 10.1063/1.3498901
    • P. Huo and D. F. Coker, J. Chem. Phys. 133, 184108 (2010). 10.1063/1.3498901
    • (2010) J. Chem. Phys. , vol.133 , pp. 184108
    • Huo, P.1    Coker, D.F.2
  • 59
    • 32644472071 scopus 로고    scopus 로고
    • Coherence in the B800 ring of purple bacteria LH2
    • DOI 10.1103/PhysRevLett.96.028103
    • Y.-C. Cheng and R. J. Silbey, Phys. Rev. Lett. 96, 028103 (2006); 10.1103/PhysRevLett.96.028103 (Pubitemid 43248297)
    • (2006) Physical Review Letters , vol.96 , Issue.2 , pp. 028103
    • Cheng, Y.C.1    Silbey, R.J.2
  • 61
    • 84859245366 scopus 로고    scopus 로고
    • See supplementary material at E-JCPSA6-136-037211 for: (1) outline of PLDM approach, and (2) summary of the Haken-Strobl model and the Liouville matrix for the three state model considered here
    • See supplementary material at http://dx.doi.org/10.1063/1.3693019 E-JCPSA6-136-037211 for: (1) outline of PLDM approach, and (2) summary of the Haken-Strobl model and the Liouville matrix for the three state model considered here.
  • 63
    • 33846478315 scopus 로고    scopus 로고
    • Electronic excitation energy transfer between two single molecules embedded in a polymer host
    • DOI 10.1103/PhysRevLett.98.047802
    • R. Metivier, F. Nolde, K. Muellen, and T. Basche, Phys. Rev. Lett. 98, 047802 (2007); 10.1103/PhysRevLett.98.047802 (Pubitemid 46168670)
    • (2007) Physical Review Letters , vol.98 , Issue.4 , pp. 047802
    • Metivier, R.1    Nolde, F.2    Mullen, K.3    Basche, T.4
  • 64
    • 28844469411 scopus 로고    scopus 로고
    • Decoherence of excitons in multichromophore systems: Thermal line broadening and destruction of superradiant emission
    • DOI 10.1103/PhysRevLett.95.177402, 177402
    • D. J. Heijs, V. A. Malyshev, and J. Knoester, Phys. Rev. Lett. 95, 177402 (2005); 10.1103/PhysRevLett.95.177402 (Pubitemid 41777393)
    • (2005) Physical Review Letters , vol.95 , Issue.17 , pp. 1-4
    • Heijs, D.J.1    Malyshev, V.A.2    Knoester, J.3
  • 70
    • 26044455380 scopus 로고    scopus 로고
    • A reduced density-matrix theory of absorption line shape of molecular aggregate
    • DOI 10.1063/1.2046668, 124705
    • M. N. Yang, J. Chem. Phys. 123, 124705 (2005); 10.1063/1.2046668 (Pubitemid 41407802)
    • (2005) Journal of Chemical Physics , vol.123 , Issue.12 , pp. 1-6
    • Yang, M.1
  • 71
    • 28144434370 scopus 로고    scopus 로고
    • Markovian approximation in the relaxation of open quantum systems
    • DOI 10.1021/jp051303o
    • Y. C. Cheng and R. J. Silbey, J. Phys. Chem. B. 109, 21399 (2005); 10.1021/jp051303o (Pubitemid 41698314)
    • (2005) Journal of Physical Chemistry B , vol.109 , Issue.45 , pp. 21399-21405
    • Cheng, Y.C.1    Silbey, R.J.2
  • 79
    • 0031551227 scopus 로고    scopus 로고
    • 10.1021/jp970707g
    • E. Sim and N. Makri, J. Phys. Chem. B 101, 5446 (1997). 10.1021/jp970707g
    • (1997) J. Phys. Chem. B , vol.101 , pp. 5446
    • Sim, E.1    Makri, N.2
  • 81
    • 2242450326 scopus 로고    scopus 로고
    • 10.1063/1.474123
    • J. Cao and G. A. Voth, J. Chem. Phys 106, 1769 (1997); 10.1063/1.474123
    • (1997) J. Chem. Phys , vol.106 , pp. 1769
    • Cao, J.1    Voth, G.A.2
  • 82
    • 0001266707 scopus 로고    scopus 로고
    • 10.1063/1.474670
    • J. Cao, J. Chem. Phys 107, 3204 (1997); 10.1063/1.474670
    • (1997) J. Chem. Phys , vol.107 , pp. 3204
    • Cao, J.1
  • 90
    • 57249084574 scopus 로고    scopus 로고
    • 10.1088/1367-2630/10/11/113019
    • M. B. Plenio and S. F. Huelga, New J. Phys 10, 113019 (2008); 10.1088/1367-2630/10/11/113019
    • (2008) New J. Phys , vol.10 , pp. 113019
    • Plenio, M.B.1    Huelga, S.F.2
  • 95
    • 84859248998 scopus 로고    scopus 로고
    • For simplicity, throughout we use this classical relationshibetween the correlation functions and the corresponding spectral densities. Switching to the quantum expression will not influence the results presented here since we use the spectral density directly, not the correlation function, and both quantum and classical expression maintain the linear relationshibetween correlation function function and spectral density
    • For simplicity, throughout we use this classical relationship between the correlation functions and the corresponding spectral densities. Switching to the quantum expression will not influence the results presented here since we use the spectral density directly, not the correlation function, and both quantum and classical expression maintain the linear relationship between correlation function function and spectral density.


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