Crowding-induced phase separation of lennard-jones particles: Implications to nuclear structures in a biological cell

Journal of Physical Chemistry B

Volumn 116, Issue 12, 2012, Pages 3874-3879

  Cho, Eun Jin ^a   Kim, Jun Soo ^b  

^a Hanyang University   (South Korea)

^b Ewha Womans University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BIOELECTRIC PHENOMENA; MOLECULAR DYNAMICS; VAPORS;

BIOLOGICAL CELLS; BIOLOGICAL STRUCTURES; BOLTZMANN CONSTANTS; CONDENSED PHASE; EXCLUDED VOLUME EFFECTS; L-J POTENTIAL; LENNARD JONES; LENNARD-JONES PARTICLES; MOLECULAR DYNAMICS SIMULATIONS; NUCLEAR BODIES; NUCLEAR ENVIRONMENTS; NUCLEAR STRUCTURE; VAPOR PHASIS;

PHASE SEPARATION;

EID: 84859221641     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp3006525     Document Type: Article

References (28)

1. Zimmerman, S. B. Biochim. Biophys. Acta 1993, 1216, 175-185
2. Hancock, R. J. Struct. Biol. 2004, 146, 281
3. Finan, K.; Cook, P. R.; Marenduzzo, D. Chromosome Res. 2011, 19, 53-61
4. Albiez, H. Chromosome Res. 2006, 14, 707-733
5. Richter, K.; Nessling, M.; Lichter, P. J. Cell Sci. 2007, 120, 1673-1680
6. Kim, J. S.; Backman, V.; Szleifer, I. Phys. Rev. Lett. 2011, 106, 168102
7. Marrenduzzo, D.; Micheletti, C.; Cook, P. R. Biophys. J. 2006, 90, 3712-3721
8. Kim, J. S.; Szleifer, I. J. Phys. Chem. C 2010, 114, 20864-20869
9. Kim, J. S.; Yethiraj, A. J. Phys. Chem. B 2011, 115, 347-353
10. Zhou, H.-X.; Rivas, G.; Minton, A. P. Annu. Rev. Biophys. 2008, 37, 375-397
11. Misteli, T. Cell 2007, 128, 787-800
12. Matera, A. G.; Izaguire-Sierra, M.; Praveen, K.; Rajendra, T. K. Dev. Cell 2009, 17, 639-647
13. Brangwynne, C. P. Soft Matter 2011, 7, 3052-3059
14. Kaiser, T. E.; Intine, R. V.; Dundr, M. Science 2008, 322, 1713-1717
15. Misteli, T. Nature 2008, 456, 333-334
16. Panagiotopoulos, A. Z. Mol. Phys. 1987, 61, 813
17. Johnson, J. K.; Zollweg, J. A.; Gubbins, K. E. Mol. Phys. 1993, 78, 591-618
18. Sides, S. W.; Grest, G. S.; Lacasse, M. Phys. Rev. E 1999, 60, 6708-6713
19. Vrabec, J.; Kedia, G. K.; Fuchs, G.; Hasse, H. Mol. Phys. 2006, 104, 1509-1527
20. Georgoulaki, A. M.; Ntouros, I. V.; Tassios, D. P.; Panagiotopoulos, A. Z. Fluid Phase Equilib. 1994, 100, 153
21. Vlot, M. J.; van Miltenburg, J. C.; Oonk, H. A. J.; van der Eerden, J. P. J. Chem. Phys. 1997, 107, 10102-10111
22. Mecke, M.; Winkelmann, J.; Fischer, J. J. Chem. Phys. 1999, 110, 1188-1194
23. Lamm, M. H.; Hall, C. K. Fluid Phase Equilib. 2001, 182, 37-46
24. van der Spoel, D.; Lindahl, E.; Hess, B.; Groenhof, G.; Mark, A. E.; Berendsen, H. J. C. J. Comput. Chem. 2005, 26, 1701
25. Handwerger, K. E.; Cordero, J. A.; Gall, J. G. Mol. Biol. Cell 2005, 16, 202-211
26. Humphrey, W.; Dalke, A.; Schulten, K. J. Mol. Graphics 1996, 14, 33-38
27. Wang, Y.; Lomakin, A.; Latypov, R. F.; Benedek, G. B. Proc. Natl. Acad. Sci. U.S.A. 2011, 108, 16606-16611
28. Bickmore, W. A.; Sutherland, H. G. E. EMBO J. 2002, 21, 1248-1254