-
1
-
-
17644369248
-
The MexGHI-OpmD multidrug efflux pump controls growth, antibiotic susceptibility and virulence in Pseudomonas aeruginosa via 4-quinolone-dependent cell-to-cell communication
-
Aendekerk, S., Diggle, S. P., Song, Z., Høiby, N., Cornelis, P., Williams, P., and Cámara, M. (2005). The MexGHI-OpmD multidrug efflux pump controls growth, antibiotic susceptibility and virulence in Pseudomonas aeruginosa via 4-quinolone-dependent cell-to-cell communication. Microbiology 151(PART 4), 1113-1125.
-
(2005)
Microbiology
, vol.151
, Issue.PART 4
, pp. 1113-1125
-
-
Aendekerk, S.1
Diggle, S.P.2
Song, Z.3
Høiby, N.4
Cornelis, P.5
Williams, P.6
Cámara, M.7
-
2
-
-
1642300392
-
Sequence polymorphism in the glycosylation island and flagellins of Pseudomonas aeruginosa
-
Arora, S. K., Wolfgang, M. C., Lory, S., and Ramphal, R. (2004). Sequence polymorphism in the glycosylation island and flagellins of Pseudomonas aeruginosa. J. Bacteriol. 186, 2115-2122.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2115-2122
-
-
Arora, S.K.1
Wolfgang, M.C.2
Lory, S.3
Ramphal, R.4
-
3
-
-
55749102738
-
Hybrid pathogenicity island PAGI-5 contributes to the highly virulent phenotype of a Pseudomonas aeruginosa isolate in mammals
-
Battle, S. E., Meyer, F., Rello, J., Kung, V. L., and Hauser, A. R. (2008). Hybrid pathogenicity island PAGI-5 contributes to the highly virulent phenotype of a Pseudomonas aeruginosa isolate in mammals. J. Bacteriol. 190, 7130-7140.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 7130-7140
-
-
Battle, S.E.1
Meyer, F.2
Rello, J.3
Kung, V.L.4
Hauser, A.R.5
-
4
-
-
57449105696
-
Genomic islands of Pseudomonas aeruginosa
-
Battle, S. E., Rello, J., and Hauser, A. R. (2009). Genomic islands of Pseudomonas aeruginosa. FEMS Microbiol. Lett. 290, 70-78.
-
(2009)
FEMS Microbiol. Lett.
, vol.290
, pp. 70-78
-
-
Battle, S.E.1
Rello, J.2
Hauser, A.R.3
-
5
-
-
77954374364
-
The Pseudomonas aeruginosa pathogenicity island PAPI-1 is transferred via a novel type IV pilus
-
Carter, M. Q., Chen, J., and Lory, S. (2010). The Pseudomonas aeruginosa pathogenicity island PAPI-1 is transferred via a novel type IV pilus. J. Bacteriol. 192, 3249-3258.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 3249-3258
-
-
Carter, M.Q.1
Chen, J.2
Lory, S.3
-
6
-
-
0030573808
-
Spread of beta-lactam-resistant Pseudomonas aeruginosa in a cystic fibrosis clinic
-
Cheng, K., Smyth, R. L., Govan, J. R., Doherty, C., Winstanley, C., Denning, N., Heaf, D. P., van Saene, H., and Hart, C. A. (1996). Spread of beta-lactam-resistant Pseudomonas aeruginosa in a cystic fibrosis clinic. Lancet 348, 639-642.
-
(1996)
Lancet
, vol.348
, pp. 639-642
-
-
Cheng, K.1
Smyth, R.L.2
Govan, J.R.3
Doherty, C.4
Winstanley, C.5
Denning, N.6
Heaf, D.P.7
van Saene, H.8
Hart, C.A.9
-
7
-
-
79959841531
-
Microevolution of the major common Pseudomonas aeruginosa clones C and PA14 in cystic fibrosis lungs
-
Cramer, N., Klockgether, J., Wrasman, K., Schmidt, M., Davenport, C., and Tümmler, B. (2011). Microevolution of the major common Pseudomonas aeruginosa clones C and PA14 in cystic fibrosis lungs. Environ. Microbiol. 13, 1590-1604.
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 1590-1604
-
-
Cramer, N.1
Klockgether, J.2
Wrasman, K.3
Schmidt, M.4
Davenport, C.5
Tümmler, B.6
-
8
-
-
65349096125
-
Visualization of Pseudomonas genomic structure by abundant 8-14mer oligonucleotides
-
Davenport, C. F., Wiehlmann, L., Reva, O. N.,and Tümmler,B. (2009).Visualization of Pseudomonas genomic structure by abundant 8-14mer oligonucleotides. Environ. Microbiol. 11, 1092-1104.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 1092-1104
-
-
Davenport, C.F.1
Wiehlmann, L.2
Reva, O.N.3
Tümmler, B.4
-
10
-
-
2442449227
-
Genomic islands in pathogenic and environmental microorganisms
-
Dobrindt, U., Hochhut, B., Hentschel, U., and Hacker, J. (2004). Genomic islands in pathogenic and environmental microorganisms. Nat. Rev. Microbiol. 2, 414-424.
-
(2004)
Nat. Rev. Microbiol.
, vol.2
, pp. 414-424
-
-
Dobrindt, U.1
Hochhut, B.2
Hentschel, U.3
Hacker, J.4
-
11
-
-
77950678110
-
Evolutionary conservation of essential and highly expressed genes in Pseudomonas aeruginosa
-
doi: 10.1186/1471-2164-11-234
-
Dötsch, A., Klawonn, F., Jarek, M., Scharfe, M., Blöcker, H., and Häussler, S. (2010). Evolutionary conservation of essential and highly expressed genes in Pseudomonas aeruginosa. BMC Genomics 11, 234. doi: 10.1186/1471-2164-11-234
-
(2010)
BMC Genomics
, vol.11
, pp. 234
-
-
Dötsch, A.1
Klawonn, F.2
Jarek, M.3
Scharfe, M.4
Blöcker, H.5
Häussler, S.6
-
12
-
-
78650078263
-
FtsZ in bacterial cytokinesis: cytoskeleton and force generator all in one
-
Erickson, H. P., Anderson, D. E., and Osawa, M. (2010). FtsZ in bacterial cytokinesis: cytoskeleton and force generator all in one. Microbiol. Mol. Biol. Rev. 74, 504-528.
-
(2010)
Microbiol. Mol. Biol. Rev.
, vol.74
, pp. 504-528
-
-
Erickson, H.P.1
Anderson, D.E.2
Osawa, M.3
-
13
-
-
9144264520
-
Genome mosaicism is conserved but not unique in Pseudomonas aeruginosa isolates from the airways of young children with cystic fibrosis
-
Ernst, R. K., DArgenio, D. A., Ichikawa, J. K., Bangera, M. G., Selgrade, S., Burns, J. L., Hiatt, P., McCoy, K., Brittnacher, M., Kas, A., Spencer, D. H., Olson, M. V., Ramsey, B. W., Lory, S., and Miller, S. I. (2003). Genome mosaicism is conserved but not unique in Pseudomonas aeruginosa isolates from the airways of young children with cystic fibrosis. Environ. Microbiol. 5, 1341-1349.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 1341-1349
-
-
Ernst, R.K.1
D'Argenio, D.A.2
Ichikawa, J.K.3
Bangera, M.G.4
Selgrade, S.5
Burns, J.L.6
Hiatt, P.7
McCoy, K.8
Brittnacher, M.9
Kas, A.10
Spencer, D.H.11
Olson, M.V.12
Ramsey, B.W.13
Lory, S.14
Miller, S.I.15
-
14
-
-
79955017837
-
Pseudomonas putida KT2440 genome update by cDNA sequencing and microarray transcriptomics
-
Frank, S., Klockgether, J., Hagendorf, P., Geffers, R., Schöck, U., Pohl, T., Davenport, C. F., and Tümmler, B. (2011). Pseudomonas putida KT2440 genome update by cDNA sequencing and microarray transcriptomics. Environ. Microbiol. 13, 1309-1326.
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 1309-1326
-
-
Frank, S.1
Klockgether, J.2
Hagendorf, P.3
Geffers, R.4
Schöck, U.5
Pohl, T.6
Davenport, C.F.7
Tümmler, B.8
-
15
-
-
44349111947
-
Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1
-
Gaillard, M., Pernet, N., Vogne, C., Hagenbüchle, O., and van der Meer, J. R. (2008). Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1. Proc. Natl. Acad. Sci. U.S.A. 105, 7058-7063.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 7058-7063
-
-
Gaillard, M.1
Pernet, N.2
Vogne, C.3
Hagenbüchle, O.4
van der Meer, J.R.5
-
16
-
-
78650778360
-
Evolutionary and functional diversity of the Pseudomonas type IVa pilin island
-
Giltner, C. L., Rana, N., Lunardo, M. N., Hussain, A. Q., and Burrows, L. L. (2011). Evolutionary and functional diversity of the Pseudomonas type IVa pilin island. Environ. Microbiol. 13, 250-264.
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 250-264
-
-
Giltner, C.L.1
Rana, N.2
Lunardo, M.N.3
Hussain, A.Q.4
Burrows, L.L.5
-
17
-
-
7744220530
-
A signaling network reciprocally regulates genes associated with acute infection and chronic persistence in Pseudomonas aeruginosa
-
Goodman,A. L., Kulasekara, B., Rietsch, A., Boyd, D., Smith, R. S., and Lory, S. (2004). A signaling network reciprocally regulates genes associated with acute infection and chronic persistence in Pseudomonas aeruginosa. Dev. Cell 7, 745-754.
-
(2004)
Dev. Cell
, vol.7
, pp. 745-754
-
-
Goodman, A.L.1
Kulasekara, B.2
Rietsch, A.3
Boyd, D.4
Smith, R.S.5
Lory, S.6
-
18
-
-
55049133396
-
Bacteriophage genomics
-
Hatfull, G. F. (2008). Bacteriophage genomics. Curr. Opin. Microbiol. 11, 447-453.
-
(2008)
Curr. Opin. Microbiol.
, vol.11
, pp. 447-453
-
-
Hatfull, G.F.1
-
19
-
-
10744225048
-
The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes
-
He, J., Baldini, R. L., Déziel, E., Saucier, M., Zhang, Q., Liberati, N. T., Lee, D., Urbach, J., Goodman, H. M., and Rahme, L. G. (2004). The broad host range pathogen Pseudomonas aeruginosa strain PA14 carries two pathogenicity islands harboring plant and animal virulence genes. Proc. Natl. Acad. Sci. U.S.A. 101, 2530-2535.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 2530-2535
-
-
He, J.1
Baldini, R.L.2
Déziel, E.3
Saucier, M.4
Zhang, Q.5
Liberati, N.T.6
Lee, D.7
Urbach, J.8
Goodman, H.M.9
Rahme, L.G.10
-
20
-
-
0033753983
-
Monitoring genome evolution ex vivo: reversible chromosomal integration of a 106 kb plasmid at two tRNA(Lys) gene loci in sequential Pseudomonas aeruginosa airway isolates
-
Kiewitz, C., Larbig, K., Klockgether, J., Weinel, C., and Tümmler, B. (2000). Monitoring genome evolution ex vivo: reversible chromosomal integration of a 106 kb plasmid at two tRNA(Lys) gene loci in sequential Pseudomonas aeruginosa airway isolates. Microbiology 146(Pt 10), 2365-2373.
-
(2000)
Microbiology
, vol.146
, Issue.PART 10
, pp. 2365-2373
-
-
Kiewitz, C.1
Larbig, K.2
Klockgether, J.3
Weinel, C.4
Tümmler, B.5
-
21
-
-
75749158559
-
Genome diversity of Pseudomonas aeruginosa PAO1 laboratory strains
-
Klockgether, J., Munder, A., Neugebauer, J., Davenport, C. F., Stanke, F., Larbig, K. D., Heeb, S., Schöck, U., Pohl, T. M., Wiehlmann, L., and Tümmler, B. (2010). Genome diversity of Pseudomonas aeruginosa PAO1 laboratory strains. J. Bacteriol. 192, 1113-1121.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 1113-1121
-
-
Klockgether, J.1
Munder, A.2
Neugebauer, J.3
Davenport, C.F.4
Stanke, F.5
Larbig, K.D.6
Heeb, S.7
Schöck, U.8
Pohl, T.M.9
Wiehlmann, L.10
Tümmler, B.11
-
22
-
-
0347285389
-
Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C
-
Klockgether, J., Reva, O., Larbig, K., and Tümmler, B. (2004). Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C. J. Bacteriol. 186, 518-534.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 518-534
-
-
Klockgether, J.1
Reva, O.2
Larbig, K.3
Tümmler, B.4
-
23
-
-
33947108811
-
Diversity of the abundant pKLC102/PAGI-2 family of genomic islands in Pseudomonas aeruginosa
-
Klockgether, J., Würdemann, D., Reva, O., Wiehlmann, L., and Tümmler, B. (2007). Diversity of the abundant pKLC102/PAGI-2 family of genomic islands in Pseudomonas aeruginosa. J. Bacteriol. 189, 2443-2459.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 2443-2459
-
-
Klockgether, J.1
Würdemann, D.2
Reva, O.3
Wiehlmann, L.4
Tümmler, B.5
-
24
-
-
57749091966
-
"Genome diversity of Pseudomonas aeruginosa,"
-
ed. P. Cornelis (Norfolk: Caister Academic Press)
-
Klockgether, J., Würdemann, D., Wiehlmann, L., Binnewies, T. T., Ussery, D. W., and Tümmler, B. (2008). "Genome diversity of Pseudomonas aeruginosa," in Pseudomonas Genomics and Molecular Biology, ed. P. Cornelis (Norfolk: Caister Academic Press), 19-42.
-
(2008)
Pseudomonas Genomics and Molecular Biology
, pp. 19-42
-
-
Klockgether, J.1
Würdemann, D.2
Wiehlmann, L.3
Binnewies, T.T.4
Ussery, D.W.5
Tümmler, B.6
-
25
-
-
0037219570
-
Impact of large chromosomal inversions on the adaptation and evolution of Pseudomonas aeruginosa chronically colonizing cystic fibrosis lungs
-
Kresse, A. U., Dinesh, S. D., Larbig, K., and Römling, U. (2003). Impact of large chromosomal inversions on the adaptation and evolution of Pseudomonas aeruginosa chronically colonizing cystic fibrosis lungs. Mol. Microbiol. 47, 145-158.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 145-158
-
-
Kresse, A.U.1
Dinesh, S.D.2
Larbig, K.3
Römling, U.4
-
26
-
-
33744728373
-
Acquisition and evolution of the exoU locus in Pseudomonas aeruginosa
-
Kulasekara, B. R., Kulasekara, H. D., Wolfgang, M. C., Stevens, L., Frank, D. W., and Lory, S. (2006). Acquisition and evolution of the exoU locus in Pseudomonas aeruginosa. J. Bacteriol. 188, 4037-4050.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 4037-4050
-
-
Kulasekara, B.R.1
Kulasekara, H.D.2
Wolfgang, M.C.3
Stevens, L.4
Frank, D.W.5
Lory, S.6
-
27
-
-
78650103372
-
The accessory genome of Pseudomonas aeruginosa
-
Kung, V. L., Ozer, E. A., and Hauser, A. R. (2010). The accessory genome of Pseudomonas aeruginosa. Microbiol. Mol. Biol. Rev. 74, 621-641.
-
(2010)
Microbiol. Mol. Biol. Rev.
, vol.74
, pp. 621-641
-
-
Kung, V.L.1
Ozer, E.A.2
Hauser, A.R.3
-
28
-
-
2942614967
-
Significant differences in type IV pilin allele distribution among Pseudomonas aeruginosa isolates from cystic fibrosis (CF) versus non-CF patients
-
Kus, J. V., Tullis, E., Cvitkovitch, D. G., and Burrows, L. L. (2004). Significant differences in type IV pilin allele distribution among Pseudomonas aeruginosa isolates from cystic fibrosis (CF) versus non-CF patients. Microbiology 150(Pt 5), 1315-1326.
-
(2004)
Microbiology
, vol.150
, Issue.PART 5
, pp. 1315-1326
-
-
Kus, J.V.1
Tullis, E.2
Cvitkovitch, D.G.3
Burrows, L.L.4
-
29
-
-
0036889019
-
Gene islands integrated into tRNA(Gly) genes confer genome diversity on a Pseudomonas aeruginosa clone
-
Larbig, K. D., Christmann, A., Johann, A., Klockgether, J., Hartsch, T., Merkl, R., Wiehlmann, L., Fritz, H. J., and Tümmler, B. (2002). Gene islands integrated into tRNA(Gly) genes confer genome diversity on a Pseudomonas aeruginosa clone. J. Bacteriol. 184, 6665-6680.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 6665-6680
-
-
Larbig, K.D.1
Christmann, A.2
Johann, A.3
Klockgether, J.4
Hartsch, T.5
Merkl, R.6
Wiehlmann, L.7
Fritz, H.J.8
Tümmler, B.9
-
30
-
-
33750924336
-
Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial
-
Lee, D. G., Urbach, J. M., Wu, G., Liberati, N. T., Feinbaum, R. L., Miyata, S., Diggins, L. T., He, J., Saucier, M., Déziel, E., Friedman, L., Li, L., Grills, G., Montgomery, K., Kucherlapati, R., Rahme, L. G., and Ausubel, F. M. (2006). Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorial. Genome Biol. 7, R90.
-
(2006)
Genome Biol
, vol.7
-
-
Lee, D.G.1
Urbach, J.M.2
Wu, G.3
Liberati, N.T.4
Feinbaum, R.L.5
Miyata, S.6
Diggins, L.T.7
He, J.8
Saucier, M.9
Déziel, E.10
Friedman, L.11
Li, L.12
Grills, G.13
Montgomery, K.14
Kucherlapati, R.15
Rahme, L.G.16
Ausubel, F.M.17
-
31
-
-
0035148906
-
Identification of a genomic island present in the majority of pathogenic isolates of Pseudomonas aeruginosa
-
Liang, X., Pham, X. Q., Olson, M. V., and Lory, S. (2001). Identification of a genomic island present in the majority of pathogenic isolates of Pseudomonas aeruginosa. J. Bacteriol. 183, 843-853.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 843-853
-
-
Liang, X.1
Pham, X.Q.2
Olson, M.V.3
Lory, S.4
-
32
-
-
54949114344
-
Characterization of the Pseudomonas pseudoalcaligenes CECT5344 cyanase, an enzyme that is not essential for cyanide assimilation
-
Luque-Almagro, V. M., Huertas, M. J., Sáez, L. P., Luque-Romero, M. M., Moreno-Vivián, C., Castillo, F., Roldán, M. D., and Blasco, R. (2008). Characterization of the Pseudomonas pseudoalcaligenes CECT5344 cyanase, an enzyme that is not essential for cyanide assimilation. Appl. Environ. Microbiol. 74, 6280-6288.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 6280-6288
-
-
Luque-Almagro, V.M.1
Huertas, M.J.2
Sáez, L.P.3
Luque-Romero, M.M.4
Moreno-Vivián, C.5
Castillo, F.6
Roldán, M.D.7
Blasco, R.8
-
33
-
-
42949094250
-
Dynamics of Pseudomonas aeruginosa genome evolution
-
Mathee, K., Narasimhan, G., Valdes, C., Qiu, X., Matewish, J. M., Koehrsen, M., Rokas, A., Yandava, C. N., Engels, R., Zeng, E., Olavarietta, R., Doud, M., Smith, R. S., Montgomery, P., White, J. R., Godfrey, P. A., Kodira, C., Birren, B., Galagan, J. E., and Lory, S. (2008). Dynamics of Pseudomonas aeruginosa genome evolution. Proc. Natl. Acad. Sci. U.S.A. 105, 3100-3105.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 3100-3105
-
-
Mathee, K.1
Narasimhan, G.2
Valdes, C.3
Qiu, X.4
Matewish, J.M.5
Koehrsen, M.6
Rokas, A.7
Yandava, C.N.8
Engels, R.9
Zeng, E.10
Olavarietta, R.11
Doud, M.12
Smith, R.S.13
Montgomery, P.14
White, J.R.15
Godfrey, P.A.16
Kodira, C.17
Birren, B.18
Galagan, J.E.19
Lory, S.20
more..
-
34
-
-
0036285760
-
Spread of an epidemic Pseudomonas aeruginosa strain from a patient with cystic fibrosis (CF) to non-CF relatives
-
McCallum,S. J.,Gallagher,M. J.,Corkill, J. E., Hart, C. A., Ledson, M. J., and Walshaw, M. J. (2002). Spread of an epidemic Pseudomonas aeruginosa strain from a patient with cystic fibrosis (CF) to non-CF relatives. Thorax 57, 559-560.
-
(2002)
Thorax
, vol.57
, pp. 559-560
-
-
McCallum, S.J.1
Gallagher, M.J.2
Corkill, J.E.3
Hart, C.A.4
Ledson, M.J.5
Walshaw, M.J.6
-
35
-
-
9244235517
-
Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islands
-
Mohd-Zain, Z., Turner, S. L., Cerdeño-Tárraga, A. M., Lilley, A. K., Inzana, T. J., Duncan, A. J., Harding, R. M., Hood, D. W., Peto, T. E., and Crook, D. W. (2004). Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islands. J. Bacteriol. 186, 8114-8122.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 8114-8122
-
-
Mohd-Zain, Z.1
Turner, S.L.2
Cerdeño-Tárraga, A.M.3
Lilley, A.K.4
Inzana, T.J.5
Duncan, A.J.6
Harding, R.M.7
Hood, D.W.8
Peto, T.E.9
Crook, D.W.10
-
36
-
-
63449128597
-
Beta-lactam resistance response triggered by inactivation of a non-essential penicillin-binding protein
-
doi: 10.1371/journal.ppat.1000353
-
Moya, B., Dötsch, A., Juan, C., Blázquez, J., Zamorano, L., Häussler, S., and Oliver, A. (2009). Betalactam resistance response triggered by inactivation of a nonessential penicillin-binding protein. PLoS Pathog. 5, e1000353. doi: 10.1371/journal.ppat.1000353
-
(2009)
PLoS Pathog
, vol.5
-
-
Moya, B.1
Dötsch, A.2
Juan, C.3
Blázquez, J.4
Zamorano, L.5
Häussler, S.6
Oliver, A.7
-
37
-
-
33845924185
-
Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosa
-
Qiu, X., Gurkar, A. U., and Lory, S. (2006). Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosa. Proc. Natl. Acad. Sci. U.S.A. 103, 19830-19835.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 19830-19835
-
-
Qiu, X.1
Gurkar, A.U.2
Lory, S.3
-
38
-
-
84920091516
-
-
Genomics, Life Style and Molecular Architecture.NewYork: Kluwer Academics/Plenum Publishers
-
Ramos, J. L. (ed.). (2004). Pseudomonas Volume 1: Genomics, Life Style and Molecular Architecture.NewYork: Kluwer Academics/Plenum Publishers.
-
Pseudomonas
, vol.1
-
-
Ramos, J.L.1
-
39
-
-
0036283567
-
-
Raymond, C. K., Sims, E. H., Kas, A., Spencer, D. H., Kutyavin, T. V., Ivey, R. G., Zhou, Y., Kaul, R., Clendenning, J. B., and Olson, M. V. (2002). Genetic variation at the O-antigen biosynthetic locus in Pseudomonas aeruginosa. J. Bacteriol. 184, 3614-3622.
-
(2002)
, vol.184
, pp. 3614-3622
-
-
Raymond, C.K.1
Sims, E.H.2
Kas, A.3
Spencer, D.H.4
Kutyavin, T.V.5
Ivey, R.G.6
Zhou, Y.7
Kaul, R.8
Clendenning, J.B.9
Olson, M.V.10
-
40
-
-
13244279471
-
Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage patterns
-
doi: 10.1186/1471-2105-5-90
-
Reva, O. N., and Tümmler, B. (2004). Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage patterns. BMC Bioinformatics 5, 90. doi: 10.1186/1471-2105-5-90
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 90
-
-
Reva, O.N.1
Tümmler, B.2
-
41
-
-
27644545371
-
Differentiation of regions with atypical oligonucleotide composition in bacterial genomes
-
doi: 10.1186/1471-2105-6-251
-
Reva, O. N., and Tümmler, B. (2005). Differentiation of regions with atypical oligonucleotide composition in bacterial genomes. BMC Bioinformatics 6, 251. doi: 10.1186/1471-2105-6-251
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 251
-
-
Reva, O.N.1
Tümmler, B.2
-
42
-
-
0029160720
-
Gradient of genomic diversity in the Pseudomonas aeruginosa chromosome
-
Römling, U., Greipel, J., and Tümmler, B. (1995). Gradient of genomic diversity in the Pseudomonas aeruginosa chromosome. Mol. Microbiol. 17, 323-332.
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 323-332
-
-
Römling, U.1
Greipel, J.2
Tümmler, B.3
-
43
-
-
0031583479
-
Large genome rearrangements discovered by the detailed analysis of 21 Pseudomonas aeruginosa clone C isolates found in environment and disease habitats
-
Römling, U., Schmidt, K. D., and Tümmler, B. (1997). Large genome rearrangements discovered by the detailed analysis of 21 Pseudomonas aeruginosa clone C isolates found in environment and disease habitats. J. Mol. Biol. 271, 386-404.
-
(1997)
J. Mol. Biol.
, vol.271
, pp. 386-404
-
-
Römling, U.1
Schmidt, K.D.2
Tümmler, B.3
-
44
-
-
77749320916
-
Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7.
-
doi: 10.1371/journal.pone.0008842
-
Roy, P. H., Tetu, S. G., Larouche, A., Elbourne, L., Tremblay, S., Ren, Q., Dodson, R., Harkins, D., Shay, R., Watkins, K., Mahamoud, Y., and Paulsen, I. T. (2010). Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7. PLoS ONE 5, e8842. doi: 10.1371/journal.pone.0008842
-
(2010)
PLoS ONE
, vol.5
-
-
Roy, P.H.1
Tetu, S.G.2
Larouche, A.3
Elbourne, L.4
Tremblay, S.5
Ren, Q.6
Dodson, R.7
Harkins, D.8
Shay, R.9
Watkins, K.10
Mahamoud, Y.11
Paulsen, I.T.12
-
45
-
-
0030027260
-
Comparative genome mapping of Pseudomonas aeruginosa PAO with P. aeruginosa C, which belongs to a major clone in cystic fibrosis patients and aquatic habitats
-
Schmidt, K. D., Tümmler, B., and Römling, U. (1996). Comparative genome mapping of Pseudomonas aeruginosa PAO with P. aeruginosa C, which belongs to a major clone in cystic fibrosis patients and aquatic habitats. J. Bacteriol. 178, 85-93.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 85-93
-
-
Schmidt, K.D.1
Tümmler, B.2
Römling, U.3
-
46
-
-
77949425194
-
The primary transcriptome of the major human pathogen Helicobacter pylori
-
Sharma, C. M., Hoffmann, S., Darfeuille, F., Reignier, J., Findeiss, S., Sittka, A., Chabas, S., Reiche, K., Hackermüller, J., Reinhardt, R., Stadler,P. F.,andVogel,J. (2010). The primary transcriptome of the major human pathogen Helicobacter pylori. Nature 464, 250-255.
-
(2010)
Nature
, vol.464
, pp. 250-255
-
-
Sharma, C.M.1
Hoffmann, S.2
Darfeuille, F.3
Reignier, J.4
Findeiss, S.5
Sittka, A.6
Chabas, S.7
Reiche, K.8
Hackermüller, J.9
Reinhardt, R.10
Stadler, P.F.11
Vogel, J.12
-
47
-
-
79958048843
-
Pseudomonas genomes: diverse and adaptable
-
Silby, M. W., Winstanley, C., Godfrey, S. A., Levy, S. B., and Jackson, R. W. (2011). Pseudomonas genomes: diverse and adaptable. FEMS Microbiol. Rev. 35, 652-680.
-
(2011)
FEMS Microbiol. Rev.
, vol.35
, pp. 652-680
-
-
Silby, M.W.1
Winstanley, C.2
Godfrey, S.A.3
Levy, S.B.4
Jackson, R.W.5
-
48
-
-
33744814106
-
Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients
-
Smith, E. E., Buckley, D. G., Wu, Z., Saenphimmachak, C., Hoffman, L. R., DArgenio, D. A., Miller, S. I., Ramsey, B. W., Speert, D. P., Moskowitz, S. M., Burns, J. L., Kaul, R., and Olson, M. V. (2006). Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients. Proc. Natl. Acad. Sci. U.S.A. 103, 8487-8492.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 8487-8492
-
-
Smith, E.E.1
Buckley, D.G.2
Wu, Z.3
Saenphimmachak, C.4
Hoffman, L.R.5
D'Argenio, D.A.6
Miller, S.I.7
Ramsey, B.W.8
Speert, D.P.9
Moskowitz, S.M.10
Burns, J.L.11
Kaul, R.12
Olson, M.V.13
-
49
-
-
14644394879
-
Evidence for diversifying selection at the pyoverdine locus of Pseudomonas aeruginosa
-
Smith, E. E., Sims, E. H., Spencer, D. H., Kaul, R., and Olson, M. V. (2005). Evidence for diversifying selection at the pyoverdine locus of Pseudomonas aeruginosa. J. Bacteriol. 187, 2138-2147.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 2138-2147
-
-
Smith, E.E.1
Sims, E.H.2
Spencer, D.H.3
Kaul, R.4
Olson, M.V.5
-
50
-
-
28044459818
-
Characterization of temporal protein production in Pseudomonas aeruginosa biofilms
-
Southey-Pillig, C. J., Davies, D. G., and Sauer, K. (2005). Characterization of temporal protein production in Pseudomonas aeruginosa biofilms. J. Bacteriol. 187, 8114-8126.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 8114-8126
-
-
Southey-Pillig, C.J.1
Davies, D.G.2
Sauer, K.3
-
51
-
-
0030569411
-
Genetic diversity of flagellins of Pseudomonas aeruginosa
-
Spangenberg, C., Heuer, T., Bürger, C., and Tümmler, B. (1996). Genetic diversity of flagellins of Pseudomonas aeruginosa. FEBS Lett. 396, 213-217.
-
(1996)
FEBS Lett
, vol.396
, pp. 213-217
-
-
Spangenberg, C.1
Heuer, T.2
Bürger, C.3
Tümmler, B.4
-
52
-
-
0037315058
-
Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa
-
Spencer, D. H., Kas, A., Smith, E. E., Raymond, C. K., Sims, E. H., Hastings, M., Burns, J. L., Kaul, R., and Olson, M. V. (2003). Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa. J. Bacteriol. 185, 1316-1325.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 1316-1325
-
-
Spencer, D.H.1
Kas, A.2
Smith, E.E.3
Raymond, C.K.4
Sims, E.H.5
Hastings, M.6
Burns, J.L.7
Kaul, R.8
Olson, M.V.9
-
53
-
-
3242881003
-
Exploring the concept of clonality in bacteria
-
Spratt, B. G. (2004). Exploring the concept of clonality in bacteria. Methods Mol. Biol. 266, 323-352.
-
(2004)
Methods Mol. Biol.
, vol.266
, pp. 323-352
-
-
Spratt, B.G.1
-
54
-
-
79952328144
-
Genetic characterization indicates that a specific subpopulation of Pseudomonas aeruginosa is associated with keratitis infections
-
Stewart, R. M., Wiehlmann, L., Ashelford, K. E., Preston, S. J., Frimmersdorf, E., Campbell, B. J., Neal, T. J., Hall, N., Tuft, S., Kaye, S. B., and Winstanley, C. (2011). Genetic characterization indicates that a specific subpopulation of Pseudomonas aeruginosa is associated with keratitis infections. J. Clin. Microbiol. 49, 993-1003.
-
(2011)
J. Clin. Microbiol.
, vol.49
, pp. 993-1003
-
-
Stewart, R.M.1
Wiehlmann, L.2
Ashelford, K.E.3
Preston, S.J.4
Frimmersdorf, E.5
Campbell, B.J.6
Neal, T.J.7
Hall, N.8
Tuft, S.9
Kaye, S.B.10
Winstanley, C.11
-
55
-
-
0034739007
-
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
-
Stover, C. K., Pham, X. Q., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S., Hufnagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G. K., Wu, Z., Paulsen, I. T., Reizer, J., Saier, M. H., Hancock, R. E., Lory, S., and Olson, M. V. (2000). Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature 406, 959-964.
-
(2000)
Nature
, vol.406
, pp. 959-964
-
-
Stover, C.K.1
Pham, X.Q.2
Erwin, A.L.3
Mizoguchi, S.D.4
Warrener, P.5
Hickey, M.J.6
Brinkman, F.S.7
Hufnagle, W.O.8
Kowalik, D.J.9
Lagrou, M.10
Garber, R.L.11
Goltry, L.12
Tolentino, E.13
Westbrock-Wadman, S.14
Yuan, Y.15
Brody, L.L.16
Coulter, S.N.17
Folger, K.R.18
Kas, A.19
Larbig, K.20
Lim, R.21
Smith, K.22
Spencer, D.23
Wong, G.K.24
Wu, Z.25
Paulsen, I.T.26
Reizer, J.27
Saier, M.H.28
Hancock, R.E.29
Lory, S.30
Olson, M.V.31
more..
-
56
-
-
33744986533
-
Glycosylation of b-type flagellin of Pseudomonas aeruginosa: structural and genetic basis
-
Verma, A., Schirm, M., Arora, S. K., Thibault, P., Logan, S. M., and Ramphal, R. (2006). Glycosylation of b-type flagellin of Pseudomonas aeruginosa: structural and genetic basis. J. Bacteriol. 188, 4395-4403.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 4395-4403
-
-
Verma, A.1
Schirm, M.2
Arora, S.K.3
Thibault, P.4
Logan, S.M.5
Ramphal, R.6
-
57
-
-
34249946313
-
Population structure of Pseudomonas aeruginosa
-
Wiehlmann, L., Wagner, G., Cramer, N., Siebert, B., Gudowius, P., Morales, G., Köhler, T., van Delden, C., Weinel, C., Slickers, P., and Tümmler, B. (2007). Population structure of Pseudomonas aeruginosa. Proc. Natl. Acad. Sci. U.S.A. 104, 8101-8106.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 8101-8106
-
-
Wiehlmann, L.1
Wagner, G.2
Cramer, N.3
Siebert, B.4
Gudowius, P.5
Morales, G.6
Köhler, T.7
van Delden, C.8
Weinel, C.9
Slickers, P.10
Tümmler, B.11
-
58
-
-
58149197594
-
Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes
-
Winsor, G. L., Van Rossum, T., Lo, R., Khaira, B., Whiteside, M. D., Hancock, R. E., and Brinkman, F. S. (2009). Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Nucleic Acids Res. 37, D483-D488.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Winsor, G.L.1
Van Rossum, T.2
Lo, R.3
Khaira, B.4
Whiteside, M.D.5
Hancock, R.E.6
Brinkman, F.S.7
-
59
-
-
61449134105
-
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool epidemic strain of Pseudomonas aeruginosa
-
Winstanley, C., Langille, M. G., Fothergill, J. L., Kukavica-Ibrulj, I., Paradis-Bleau, C., Sanschagrin, F., Thomson, N. R., Winsor, G. L., Quail, M. A., Lennard, N., Bignell, A., Clarke, L., Seeger, K., Saunders, D., Harris, D., Parkhill, J., Hancock, R. E., Brinkman, F. S., and Levesque, R. C. (2009). Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool epidemic strain of Pseudomonas aeruginosa. Genome Res. 19, 12-23.
-
(2009)
Genome Res
, vol.19
, pp. 12-23
-
-
Winstanley, C.1
Langille, M.G.2
Fothergill, J.L.3
Kukavica-Ibrulj, I.4
Paradis-Bleau, C.5
Sanschagrin, F.6
Thomson, N.R.7
Winsor, G.L.8
Quail, M.A.9
Lennard, N.10
Bignell, A.11
Clarke, L.12
Seeger, K.13
Saunders, D.14
Harris, D.15
Parkhill, J.16
Hancock, R.E.17
Brinkman, F.S.18
Levesque, R.C.19
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