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Volumn 21, Issue 7, 2012, Pages 1539-1541

The memory remains: Application of historical DNA for scaling biodiversity loss

Author keywords

biodiversity; ESU; historical DNA samples; microevolution; population genomics; scales; sockeye salmon

Indexed keywords

DNA; MICROSATELLITE DNA;

EID: 84859075853     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2012.05498.x     Document Type: Review
Times cited : (8)

References (31)
  • 4
    • 79959435199 scopus 로고    scopus 로고
    • Genome-wide genetic marker discovery and genotyping using next-generation sequencing
    • Davey JW, Hohenlohe PA, Etter PD, et al. (2011) Genome-wide genetic marker discovery and genotyping using next-generation sequencing. Nature Reviews Genetics, 12, 499-510.
    • (2011) Nature Reviews Genetics , vol.12 , pp. 499-510
    • Davey, J.W.1    Hohenlohe, P.A.2    Etter, P.D.3
  • 5
    • 77958150590 scopus 로고    scopus 로고
    • Sequencing the genome of the Atlantic salmon (Salmosalar)
    • Davidson WS, Koop BF, Jones SJM, et al. (2010) Sequencing the genome of the Atlantic salmon (Salmosalar). Genome Biology, 11, 403.
    • (2010) Genome Biology , vol.11 , pp. 403
    • Davidson, W.S.1    Koop, B.F.2    Jones, S.J.M.3
  • 6
    • 79951946915 scopus 로고    scopus 로고
    • Extent and scale of local adaptation in salmonid fishes: Review and meta-analysis
    • Fraser DJ, Weir LK, Bernatchez L, Hansen MM, Taylor EB, (2011) Extent and scale of local adaptation in salmonid fishes: review and meta-analysis. Heredity, 106, 404-420.
    • (2011) Heredity , vol.106 , pp. 404-420
    • Fraser, D.J.1    Weir, L.K.2    Bernatchez, L.3    Hansen, M.M.4    Taylor, E.B.5
  • 8
    • 84858080216 scopus 로고    scopus 로고
    • Monitoring adaptive genetic responses to environmental change
    • GeM working group
    • Hansen MM, Olivieri I, Waller DM, GeM working group (2012) Monitoring adaptive genetic responses to environmental change. Molecular Ecology, 21, 1311-1329.
    • (2012) Molecular Ecology , vol.21 , pp. 1311-1329
    • Hansen, M.M.1    Olivieri, I.2    Waller, D.M.3
  • 9
    • 79951748696 scopus 로고    scopus 로고
    • Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout
    • Hohenlohe PA, Amish SJ, Catchen JM, Allendorf FW, Luikart G, (2011) Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout. Molecular Ecology Resources, 11, 117-122.
    • (2011) Molecular Ecology Resources , vol.11 , pp. 117-122
    • Hohenlohe, P.A.1    Amish, S.J.2    Catchen, J.M.3    Allendorf, F.W.4    Luikart, G.5
  • 10
    • 77951241851 scopus 로고    scopus 로고
    • Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadusmorhua)
    • Hubert S, Higgins B, Borza T, Bowman S, (2010) Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadusmorhua). BMC Genomics, 11, 191.
    • (2010) BMC Genomics , vol.11 , pp. 191
    • Hubert, S.1    Higgins, B.2    Borza, T.3    Bowman, S.4
  • 11
    • 84859033567 scopus 로고    scopus 로고
    • Resurrecting an extinct salmon evolutionary significant unit: Archived scales, historical DNA and implications for restoration
    • Iwamoto EM, Myers JM, Gustafson RG, (2012) Resurrecting an extinct salmon evolutionary significant unit: archived scales, historical DNA and implications for restoration. Molecular Ecology, 21, 1567-1582.
    • (2012) Molecular Ecology , vol.21 , pp. 1567-1582
    • Iwamoto, E.M.1    Myers, J.M.2    Gustafson, R.G.3
  • 13
    • 64749090271 scopus 로고    scopus 로고
    • Historical baselines for large marine animals
    • Lotze HK, Worm B, (2009) Historical baselines for large marine animals. Trends in Ecology & Evolution, 24, 254-262.
    • (2009) Trends in Ecology & Evolution , vol.24 , pp. 254-262
    • Lotze, H.K.1    Worm, B.2
  • 14
    • 84855456602 scopus 로고    scopus 로고
    • A conserved haplotype controls parallel adaptation in geographically distant salmonid populations
    • Miller MR, Brunelli JP, Wheeler PA, et al. (2012) A conserved haplotype controls parallel adaptation in geographically distant salmonid populations. Molecular Ecology, 21, 237-249.
    • (2012) Molecular Ecology , vol.21 , pp. 237-249
    • Miller, M.R.1    Brunelli, J.P.2    Wheeler, P.A.3
  • 15
    • 56549114818 scopus 로고    scopus 로고
    • Bridging the gap between the genotype and the phenotype: Linking genetic variation, selection and adaptation in fishes
    • Naish KA, Hard JJ, (2008) Bridging the gap between the genotype and the phenotype: linking genetic variation, selection and adaptation in fishes. Fish & Fisheries, 9, 396-424.
    • (2008) Fish & Fisheries , vol.9 , pp. 396-424
    • Naish, K.A.1    Hard, J.J.2
  • 17
    • 56549112524 scopus 로고    scopus 로고
    • Waking the dead: The value of population genetic analyses of historical samples
    • Nielsen EE, Hansen MM, (2008) Waking the dead: the value of population genetic analyses of historical samples. Fish & Fisheries, 9, 450-461.
    • (2008) Fish & Fisheries , vol.9 , pp. 450-461
    • Nielsen, E.E.1    Hansen, M.M.2
  • 18
    • 68149105752 scopus 로고    scopus 로고
    • Population genomics of marine fish: Identification of adaptive variation in space and time
    • Nielsen EE, Hemmer-Hansen J, Larsen PF, Bekkevold D, (2009) Population genomics of marine fish: identification of adaptive variation in space and time. Molecular Ecology, 18, 3128-3150.
    • (2009) Molecular Ecology , vol.18 , pp. 3128-3150
    • Nielsen, E.E.1    Hemmer-Hansen, J.2    Larsen, P.F.3    Bekkevold, D.4
  • 19
    • 79953706608 scopus 로고    scopus 로고
    • A first generation integrated map of the rainbow trout genome
    • Palti Y, Genet C, Luo MC, et al. (2011) A first generation integrated map of the rainbow trout genome. BMC Genomic, 12, 180.
    • (2011) BMC Genomic , vol.12 , pp. 180
    • Palti, Y.1    Genet, C.2    Luo, M.C.3
  • 20
    • 0000754098 scopus 로고
    • Anecdotes and the shifting base-line syndrome in fisheries
    • Pauley D, (1995) Anecdotes and the shifting base-line syndrome in fisheries. Trends in Ecology & Evolution, 10, 430.
    • (1995) Trends in Ecology & Evolution , vol.10 , pp. 430
    • Pauley, D.1
  • 21
    • 80052313194 scopus 로고    scopus 로고
    • Microgeographical population structure and adaptation in Atlantic cod Gadusmorhua: Spatio-temporal insights from gene-associated DNA markers
    • Poulsen NA, Hemmer-Hansen J, Loeschcke V, Carvalho GR, Nielsen EE, (2011) Microgeographical population structure and adaptation in Atlantic cod Gadusmorhua: spatio-temporal insights from gene-associated DNA markers. Marine Ecology Progress Series, 436, 231-243.
    • (2011) Marine Ecology Progress Series , vol.436 , pp. 231-243
    • Poulsen, N.A.1    Hemmer-Hansen, J.2    Loeschcke, V.3    Carvalho, G.R.4    Nielsen, E.E.5
  • 23
    • 76749141381 scopus 로고    scopus 로고
    • Ancient human genome sequence of an extinct Palaeo-Eskimo
    • Rasmussen M, Li YR, Lindgreen S, et al. (2010) Ancient human genome sequence of an extinct Palaeo-Eskimo. Nature, 463, 757-762.
    • (2010) Nature , vol.463 , pp. 757-762
    • Rasmussen, M.1    Li, Y.R.2    Lindgreen, S.3
  • 24
    • 77953212693 scopus 로고    scopus 로고
    • Population diversity and the portfolio effect in an exploited species
    • Schindler DE, Hilborn R, Chasco B, et al. (2010) Population diversity and the portfolio effect in an exploited species. Nature, 465, 609-612.
    • (2010) Nature , vol.465 , pp. 609-612
    • Schindler, D.E.1    Hilborn, R.2    Chasco, B.3
  • 25
    • 79751491452 scopus 로고    scopus 로고
    • Single nucleotide polymorphisms across a species' range: Implications for conservation studies of Pacific salmon
    • Seeb LW, Templin WD, Sato S, et al., (2011) Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon. Molecular Ecology Resources, 11, 195-207.
    • (2011) Molecular Ecology Resources , vol.11 , pp. 195-207
    • Seeb, L.W.1    Templin, W.D.2    Sato, S.3
  • 26
    • 0032718203 scopus 로고    scopus 로고
    • Managing fisheries using genetic data: Case studies from four species of Pacific salmon
    • DOI 10.1016/S0165-7836(99)00066-1, PII S0165783699000661
    • Shaklee JB, Beacham TD, Seeb L, White BA, (1999) Managing fisheries using genetic data: case studies from four species of Pacific salmon. Fisheries Research, 43, 45-78. (Pubitemid 29514660)
    • (1999) Fisheries Research , vol.43 , Issue.1-3 , pp. 45-78
    • Shaklee, J.B.1    Beacham, T.D.2    Seeb, L.3    White, B.A.4
  • 27
    • 79951760007 scopus 로고    scopus 로고
    • Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales
    • Smith MJ, Pascal CE, Grauvogel Z, Habicht C, Seeb JE, Seeb LW, (2011) Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales. Molecular Ecology Resources, 11, 268-277.
    • (2011) Molecular Ecology Resources , vol.11 , pp. 268-277
    • Smith, M.J.1    Pascal, C.E.2    Grauvogel, Z.3    Habicht, C.4    Seeb, J.E.5    Seeb, L.W.6
  • 29
    • 84959820724 scopus 로고
    • Genetic variability and relationships in Pacific salmon and related trout based on protein variations
    • Utter FM, Allendorf FW, Hodgins HO, (1973) Genetic variability and relationships in Pacific salmon and related trout based on protein variations. Systematic Zoology, 22, 257-270.
    • (1973) Systematic Zoology , vol.22 , pp. 257-270
    • Utter, F.M.1    Allendorf, F.W.2    Hodgins, H.O.3
  • 30
    • 36549023365 scopus 로고    scopus 로고
    • Back to the future: Museum specimens in population genetics
    • DOI 10.1016/j.tree.2007.08.017, PII S0169534707002832
    • Wandeler P, Hoeck PEA, Keller LF, (2007) Back to the future: museum specimens in population genetics. Trends in Ecology & Evolution, 22, 634-642. (Pubitemid 350180149)
    • (2007) Trends in Ecology and Evolution , vol.22 , Issue.12 , pp. 634-642
    • Wandeler, P.1    Hoeck, P.E.A.2    Keller, L.F.3
  • 31
    • 0002643007 scopus 로고
    • Evolutionary significant units and the conservation of biological diversity under the endangered species act
    • Waples RS, (1995) Evolutionary significant units and the conservation of biological diversity under the endangered species act. American Fisheries Society Symposium, 17, 8-27.
    • (1995) American Fisheries Society Symposium , vol.17 , pp. 8-27
    • Waples, R.S.1


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