Automated analysis and classification of infected macrophages using bright-field amplitude contrast data

Journal of Biomolecular Screening

Volumn 17, Issue 3, 2012, Pages 401-408

  Adiga, Umesh ^a   Taylor, Debbie ^b,c   Bell, Brian ^a   Ponomareva, Larissa ^d   Kanzlemar, Stephen ^e   Kramer, Ryan ^b,c   Saldanha, Roland ^a   Nelson, Sandra ^d   Lamkin, Thomas J ^b,c  

^a UES INC   (United States)

^b AIR FORCE RESEARCH LABORATORY   (United States)

^c UNIVERSITY OF CINCINNATI COLLEGE OF MEDICINE   (United States)

^d UNIVERSITY OF CINCINNATI   (United States)

^e HENRY M JACKSON FOUNDATION FOR THE ADVANCEMENT OF MILITARY MEDICINE   (United States)

Author keywords

high content screening; image analysis; imaging technologies; microscopy

Indexed keywords

ARTICLE; AUTOANALYSIS; BRIGHT FIELD MICROSCOPY; CELL DENSITY; CELL VIABILITY; CONTROLLED STUDY; HIGH THROUGHPUT SCREENING; IMAGE ANALYSIS; IMAGE ENHANCEMENT; IMAGE QUALITY; MACROPHAGE; PHENOTYPE; PRIORITY JOURNAL; TULAREMIA;

ALGORITHMS; CELL COUNT; CELL SURVIVAL; FRANCISELLA TULARENSIS; HUMANS; IMAGE ENHANCEMENT; IMAGE PROCESSING, COMPUTER-ASSISTED; MACROPHAGES; MICROSCOPY; PATTERN RECOGNITION, AUTOMATED; PHENOTYPE; TULAREMIA;

EID: 84859056832     PISSN: 10870571     EISSN: 1552454X     Source Type: Journal    
DOI: 10.1177/1087057111426902     Document Type: Article

References (15)

1. Ambriz-Colin, F.; Torres-Cisneros, M.; Avina-Cervantes, J. G.; Saavedra-Martinez, J. E.; Debeir, O.; Sanchez-Mondragon, J. J. Detection of Biological Cells in Phase-Contrast Microscopy Images. IEEE Artif. Intell. Conf. 2006, 5, 68-77. (Pubitemid 47214405)
2. Hand, A. J.; Sun, T.; Barber, D. C.; Hose, D. R.; MacNeil, S. Automated Tracking of Migrating Cells in Phase-Contrast Video Microscopy Sequences Using Image Registration. J. Microsc. 2009, 234, 62-79.
3. Debeir, O.; Ham, P. V.; Kiss, R.; Decaestecker, C. Tracking of Migrating Cells under Phase Contrast Video Microscopy with Combined Mean Shift Processes. IEEE Trans. Med. Imaging 2005, 24, 697-711. (Pubitemid 40850522)
4. Tscherepanow, M.; Zollner, F.; Hillebrand, M.; Kummert, F. Automatic Segmentation of Unstained Living Cells in Bright Field Microscope Images. In MDA 2008; Perner, P., Salvetti, O., Eds.; Springer-Verlag: Heidelberg, Germany, 2008; pp. 158-172.
5. Tscherepanow, M.; Zollner, F. Classification of Segmented Regions in Bright Field Microscope Images. Proc. Int. Conf. Pattern Recognition 2006, 3, 972-975.
6. Kittler, J.; Illingworth, J. Minimum Error Thresholding. Pattern Recognition 1986, 19, 141-147.
7. Adiga, U.; Malladi, R.; Gonzalez, R. F.; Solorzano, C. High-Throughput Analysis of Multispectral Images of Breast Cancer Tissue. IEEE Trans. Image Processing 2006, 15, 2259-2269.
8. Laptev, I.; Lindberg, T. In Tracking of Multi-State Hand Models Using Particle Filtering and a Hierarchy of Multi-Scale Features, Proceedings of the Third International Conference on Scale-Space and Morphology in Computer Vision, Vancouver, Canada, July 7-8, 2001; Kerkhove, M., Ed.; Springer-Verlag: Heidelberg, Germany, 2001; pp. 63-74.
9. Rizon, M.; Yazid, H.; Saad, P.; Shakaff, A. Y.; Saad, A. R.; Mamat, M. R.; Yaacob, S.; Desa, H.; Karthigayan, M. Object Detection Using Geometric Invariant Moment. Am. J. Appl. Sci. 2006, 2, 1876-1878.
10. Haralick, R. M. Statistical and Structural Approaches to Texture. Proc. IEEE 1979, 67, 786-804.
11. Varela, C.; Karssemeijer, N.; Tahoces, P. G. Classification of Breast Tumors on Digital Mammograms Using Laws'Texture Features. In Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001; Niessen, W. J., Viergever, M. A., Eds.; Springer-Verlag: Heidelberg, Germany, 2001; pp. 1391-1392. (Pubitemid 33352630)
12. Ravela, S. On Multi-Scale Differential Features and Their Representations for Image Retrieval and Recognition (January 1, 2003). Electronic Doctoral Dissertations for UMass Amherst. http://scholarworks.umass.edu/dissertations/ AAI3078716
13. Pietikäinen, M. Image Analysis with Local Binary Patterns. Image Anal. Lect. Notes Comput. Sci. 2005, 3540, 115-118. (Pubitemid 41422655)
14. Bashar, M. K.; Ohnishi, N. Image Retrieval by Local Contrast Patterns and Color. In Advances in Visual Computing; Bebis, G., Boyle, R., Parvin, B., Koracin, D., Remagnino, P., Nefian, A., Meenakshisundaram, G., Pascucci, V., Zara, J., Molineros, J., et al., Eds.; Springer-Verlag: Heidelberg, Germany, 2006; pp. 136-145. (Pubitemid 44891458)
15. Kruskal, J. B. Multidimensional Scaling byOptimizing Goodness of Fit to a Nonmetric Hypothesis. Psychometrika 1964, 29, 1-27.