-
1
-
-
4043090758
-
Optical sectioning deep inside live embryos by selective plane illumination microscopy
-
DOI 10.1126/science.1100035
-
J. Huisken, J. Swoger, F. D. Bene, J. Wittbrodt, and E. H. K. Stelzer, "Optical sectioning deep inside live embryos by selective plane illumination microscopy," Science, vol. 305, no. 5686, pp. 1007-1009, Aug. 2004. (Pubitemid 39071776)
-
(2004)
Science
, vol.305
, Issue.5686
, pp. 1007-1009
-
-
Huisken, J.1
Swoger, J.2
Del Bene, F.3
Wittbrodt, J.4
Stelzer, E.H.K.5
-
2
-
-
41849087358
-
A fast thresholded landweber algorithm for wavelet-regularized multidimensional deconvolution
-
DOI 10.1109/TIP.2008.917103
-
C. Vonesch andM. Unser, "A fast thresholded landweber algorithm for wavelet-regularized multidimensional deconvolution," IEEE Trans. Image Process., vol. 17, no. 4, pp. 539-549, Apr. 2008. (Pubitemid 351493877)
-
(2008)
IEEE Transactions on Image Processing
, vol.17
, Issue.4
, pp. 539-549
-
-
Vonesch, C.1
Unser, M.2
-
3
-
-
84883846117
-
A new and general method for blind shift-variant deconvolution of biomedical images
-
Oct.
-
M. Blume, D. Zikic, W. Wein, and N. Navab, "A new and general method for blind shift-variant deconvolution of biomedical images," Proc. MICCAI Oct. 2007, pp. 743-750.
-
(2007)
Proc. Miccai
, pp. 743-750
-
-
Blume, M.1
Zikic, D.2
Wein, W.3
Navab, N.4
-
4
-
-
77956001536
-
Efficient filter flow for space-variant multiframe blind deconvolution
-
M. Hirsch, S. Sra, B. Schoelkopf, and S. Harmeling, "Efficient filter flow for space-variant multiframe blind deconvolution," in Proc. IEEE Conf. Comput. Vis. Pattern Recognit., 2010, pp. 607-614.
-
(2010)
Proc. IEEE Conf. Comput. Vis. Pattern Recognit.
, pp. 607-614
-
-
Hirsch, M.1
Sra, S.2
Schoelkopf, B.3
Harmeling, S.4
-
5
-
-
51049098120
-
Inhomogeneous deconvolution in a biological images context
-
May
-
A. Ogier, T. Dorval, and A. Genovesio, "Inhomogeneous deconvolution in a biological images context," in Proc. IEEE Int. Symp. Biomed. Imag., May 2008, pp. 744-747.
-
(2008)
Proc. IEEE Int. Symp. Biomed. Imag.
, pp. 744-747
-
-
Ogier, A.1
Dorval, T.2
Genovesio, A.3
-
6
-
-
0041426516
-
Multichannel blind iterative image restoration
-
Sep.
-
F. Sroubek and J. Flusser, "Multichannel blind iterative image restoration," IEEE Trans. Image Process., vol. 12, no. 9, pp. 1094-1106, Sep. 2003.
-
(2003)
IEEE Trans. Image Process.
, vol.12
, Issue.9
, pp. 1094-1106
-
-
Sroubek, F.1
Flusser, J.2
-
7
-
-
79551679510
-
Classification-based adaptive filtering for multiframe blind image restoration
-
Feb.
-
A. Giannoula, "Classification-based adaptive filtering for multiframe blind image restoration," IEEE Trans. Image Process., vol. 20, no. 2, pp. 382-390, Feb. 2011.
-
(2011)
IEEE Trans. Image Process.
, vol.20
, Issue.2
, pp. 382-390
-
-
Giannoula, A.1
-
8
-
-
80055062627
-
Multiple-view microscopy with light-sheet based fluorescence microscope
-
Ph.D. dissertation Heidelberg, Heidelberg, Germany
-
U. Krzic, "Multiple-view microscopy with light-sheet based fluorescence microscope," Ph.D. dissertation, Rupert-Carola Univ. Heidelberg, Heidelberg, Germany, 2009.
-
(2009)
Rupert-Carola Univ.
-
-
Krzic, U.1
-
9
-
-
77952987028
-
Software for bead-based registration of selective plane illumination microscopy data
-
Jun.
-
S. Preibisch, S. Saalfeld, J. Schindelin, and P. Tomancak, "Software for bead-based registration of selective plane illumination microscopy data," Nat. Methods, vol. 7, no. 6, pp. 418-419, Jun. 2010.
-
(2010)
Nat. Methods
, vol.7
, Issue.6
, pp. 418-419
-
-
Preibisch, S.1
Saalfeld, S.2
Schindelin, J.3
Tomancak, P.4
-
10
-
-
78149490782
-
Evaluation of a new point clouds registration method based on group averaging features
-
M. Temerinac-Ott, M. Keuper, and H. Burkhardt, "Evaluation of a new point clouds registration method based on group averaging features," in Proc. IEEE Int. Conf. Pattern Recognit., 2010, pp. 2452-2455.
-
(2010)
Proc. IEEE Int. Conf. Pattern Recognit.
, pp. 2452-2455
-
-
Temerinac-Ott, M.1
Keuper, M.2
Burkhardt, H.3
-
11
-
-
80055039363
-
Spatially-variant Lucy-Richardson deconvolution for multiview fusion of microscopical 3D images
-
M. Temerinac-Ott, O. Ronneberger, R. Nitschke, W. Driever, and H. Burkhardt, "Spatially-variant Lucy-Richardson deconvolution for multiview fusion of microscopical 3D images," in Proc. IEEE Int. Symp. Biomed. Imaging, 2011, pp. 899-904.
-
(2011)
Proc. IEEE Int. Symp. Biomed. Imaging
, pp. 899-904
-
-
Temerinac-Ott, M.1
Ronneberger, O.2
Nitschke, R.3
Driever, W.4
Burkhardt, H.5
-
12
-
-
0000847697
-
Linear and nonlinear image deblurring: A documented study
-
PII S0036142997320413
-
A. S. Carasso, "Linear and nonlinear image deblurring: A documented study," SIAM J. Numer. Anal., vol. 36, no. 6, pp. 1659-1689, Dec. 1999. (Pubitemid 129568029)
-
(1999)
SIAM Journal on Numerical Analysis
, vol.36
, Issue.6
, pp. 1659-1689
-
-
Carasso, A.S.1
-
14
-
-
0033384861
-
Three-dimensional imaging by deconvolution microscopy
-
DOI 10.1006/meth.1999.0873
-
J. G. McNally, T. Karpova, J. Cooper, and J. Conchello, "Three-dimensional imaging by deconvolution microscopy," Methods, vol. 19, no. 3, pp. 373-385, Nov. 1999. (Pubitemid 30028596)
-
(1999)
Methods: A Companion to Methods in Enzymology
, vol.19
, Issue.3
, pp. 373-385
-
-
McNally, J.G.1
Karpova, T.2
Cooper, J.3
Conchello, J.A.4
-
15
-
-
0001050714
-
An iterative technique for the rectification of observed distributions
-
Jun.
-
L. B. Lucy, "An iterative technique for the rectification of observed distributions," Astron. J., vol. 79, no. 6, pp. 745-754, Jun. 1974.
-
(1974)
Astron. J.
, vol.79
, Issue.6
, pp. 745-754
-
-
Lucy, L.B.1
-
16
-
-
0002594849
-
Bayesian-based iterative method of image restoration
-
Jan.
-
W. H. Richardson, "Bayesian-based iterative method of image restoration," J. Opt. Soc. Amer., vol. 62, no. 1, pp. 55-59, Jan. 1972.
-
(1972)
J. Opt. Soc. Amer.
, vol.62
, Issue.1
, pp. 55-59
-
-
Richardson, W.H.1
-
17
-
-
0030840186
-
Noise analysis of MAP-EM algorithms for emission tomography
-
DOI 10.1088/0031-9155/42/11/015, PII S0031915597833453
-
W. Wang and G. Gindi, "Noise analysis of MAP-EM algorithms for emission tomography," Phys. Med. Biol., vol. 42, no. 11, pp. 2215-2232, Nov. 1997. (Pubitemid 27512539)
-
(1997)
Physics in Medicine and Biology
, vol.42
, Issue.11
, pp. 2215-2232
-
-
Wang, W.1
Gindi, G.2
-
18
-
-
34247882949
-
High-resolution three-dimensional imaging of large specimens with light sheet-based microscopy
-
DOI 10.1038/nmeth1017, PII NMETH1017
-
P. J. Verveer, J. Swoger, F. Pampaloni, K. Greger, M. Marcello, and E. H. K. Stelzer, "High-resolution tree-dimensional imaging of large specimens with light sheet-based microscopy," Nat. Methods, vol. 4, no. 4, pp. 311-313, Apr. 2007. (Pubitemid 46766973)
-
(2007)
Nature Methods
, vol.4
, Issue.4
, pp. 311-313
-
-
Verveer, P.J.1
Swoger, J.2
Pampaloni, F.3
Greger, K.4
Marcello, M.5
Stelzer, E.H.K.6
-
19
-
-
33645901226
-
Richardson-Lucy algorithm with total variation regularization for 3D confocal microscope deconvolution
-
Apr.
-
N. Dey, L. Blanc-Fraud, C. Zimmer, Z. Kam, P. Roux, J. Olivo-Marin, and J. Zerubia, "Richardson-Lucy algorithm with total variation regularization for 3D confocal microscope deconvolution," Microsc. Res. Tech., vol. 69, no. 4, pp. 260-266, Apr. 2006.
-
(2006)
Microsc. Res. Tech.
, vol.69
, Issue.4
, pp. 260-266
-
-
Dey, N.1
Blanc-Fraud, L.2
Zimmer, C.3
Kam, Z.4
Roux, P.5
Olivo-Marin, J.6
Zerubia, J.7
-
20
-
-
0018306059
-
THRESHOLD SELECTION METHOD from GRAY-LEVEL HISTOGRAMS.
-
N. Otsu, "A threshold selection method from gray-level histograms," IEEE Trans. Syst. Man Cybern., vol. SMC-9, no. 1, pp. 62-66, Jan. 1979. (Pubitemid 9413341)
-
(1979)
IEEE Trans Syst Man Cybern
, vol.SMC-9
, Issue.1
, pp. 62-66
-
-
Nobuyuki, O.1
-
21
-
-
0002163712
-
Invariant features in pattern recognition- Fundamentals and applications
-
C. Kotropoulos and I. Pitas, Eds. New York: Wiley
-
H. Burkhardt and S. Siggelkow, "Invariant features in pattern recognition- Fundamentals and applications," in Nonlinear Model-Based Image/Video Processing and Analysis, C. Kotropoulos and I. Pitas, Eds. New York: Wiley, 2001, pp. 269-307.
-
(2001)
Nonlinear Model-Based Image/Video Processing and Analysis
, pp. 269-307
-
-
Burkhardt, H.1
Siggelkow, S.2
-
22
-
-
34547340385
-
Invariant features for searching in protein fold databases
-
DOI 10.1080/00207160701351937, PII 780342112, Bioinformatics
-
M. Temerinac, M. Reisert, and H. Burkhardt, "Invariant features for searching in protein fold databases," Int. J. Comput. Math., vol. 84, no. 5, pp. 635-651, May 2007. (Pubitemid 47147641)
-
(2007)
International Journal of Computer Mathematics
, vol.84
, Issue.5
, pp. 635-651
-
-
Temerinac, M.1
Reisert, M.2
Burkhardt, H.3
-
23
-
-
0019574599
-
Random sample consensus: A paradigm for model fitting with applications to image analysis and automated cartography
-
Jun.
-
M. A. Fischler and R. C. Bolles, "Random sample consensus: A paradigm for model fitting with applications to image analysis and automated cartography," Commun. ACM, vol. 24, no. 6, pp. 381-395, Jun. 1981.
-
(1981)
Commun. ACM
, vol.24
, Issue.6
, pp. 381-395
-
-
Fischler, M.A.1
Bolles, R.C.2
-
24
-
-
84975553202
-
Closed-form solution of absolute orientation using unit quaternions
-
Apr.
-
B. K. Horn, "Closed-form solution of absolute orientation using unit quaternions," J. Opt. Soc. Amer. A, vol. 4, no. 4, pp. 629-642, Apr. 1987.
-
(1987)
J. Opt. Soc. Amer. A
, vol.4
, Issue.4
, pp. 629-642
-
-
Horn, B.K.1
-
25
-
-
0037328027
-
Precise 3D image alignment in micro-axial tomography
-
DOI 10.1046/j.1365-2818.2003.01104.x
-
P. Matula, M. Kozubek, F. Staier, and M. Hausmann, "Precise 3D image alignment in micro-axial tomography," J. Microsc., vol. 209, no. Pt 2, pp. 126-142, Feb. 2003. (Pubitemid 36254699)
-
(2003)
Journal of Microscopy
, vol.209
, Issue.2
, pp. 126-142
-
-
Matula, P.1
Kozubek, M.2
Staier, F.3
Hausmann, M.4
-
26
-
-
0026821209
-
A method for registration of 3-d shapes
-
Feb.
-
P. J. Besl and N. D.McKay, "A method for registration of 3-d shapes," IEEE Trans. Pattern Anal. Mach. Intell., vol. 14, no. 2, pp. 239-256, Feb. 1992.
-
(1992)
IEEE Trans. Pattern Anal. Mach. Intell.
, vol.14
, Issue.2
, pp. 239-256
-
-
Besl, P.J.1
McKay, N.D.2
-
27
-
-
78049529743
-
Blind image deconvolution using machine learning for three- dimensionalmicroscopy
-
Dec.
-
T. Kenig, Z. Kam, and A. Feuer, "Blind image deconvolution using machine learning for three-dimensionalmicroscopy," IEEE Trans. Pattern Anal. Mach. Intell., vol. 32, no. 12, pp. 2191-2204, Dec. 2010.
-
(2010)
IEEE Trans. Pattern Anal. Mach. Intell.
, vol.32
, Issue.12
, pp. 2191-2204
-
-
Kenig, T.1
Kam, Z.2
Feuer, A.3
-
28
-
-
0345412725
-
Image-Adaptive Deconvolution for Three-Dimensional Deep Biological Imaging
-
J. B. de Monvel, E. Scarfone, S. L. Calvez, and M. Ulfendahl, "Image-adaptive deconvolution for three-dimensional deep biological imaging," Biophys. J., vol. 85, no. 6, pp. 3991-4001, Dec. 2003. (Pubitemid 37490308)
-
(2003)
Biophysical Journal
, vol.85
, Issue.6
, pp. 3991-4001
-
-
De Monvel, J.B.1
Scarfone, E.2
Le Calvez, S.3
Ulfendahl, M.4
-
30
-
-
4544308033
-
Depth-variant maximum-likelihood restoration for three-dimensional fluorescence microscopy
-
Sep.
-
C. Preza and J. Conchello, "Depth-variant maximum-likelihood restoration for three-dimensional fluorescence microscopy," J. Opt. Soc. Amer. A, vol. 21, no. 9, pp. 1593-1601, Sep. 2004.
-
(2004)
J. Opt. Soc. Amer. A
, vol.21
, Issue.9
, pp. 1593-1601
-
-
Preza, C.1
Conchello, J.2
-
31
-
-
0024681039
-
A generalized EMalgorithm for 3D Bayesian reconstruction from Poisson data using Gibbs priors
-
Jun.
-
T. Hebert and R. Leahy, "A generalized EMalgorithm for 3D Bayesian reconstruction from Poisson data using Gibbs priors," IEEE Trans. Med. Imag., vol. 8, no. 2, pp. 194-202, Jun. 1989.
-
(1989)
IEEE Trans. Med. Imag.
, vol.8
, Issue.2
, pp. 194-202
-
-
Hebert, T.1
Leahy, R.2
-
32
-
-
0000357775
-
On use of the em for penalized likelihood estimation
-
P. J. Green, "On use of the EM for penalized likelihood estimation," J. R. Stat. Soc. Ser. B Stat. Methodol., vol. 52, no. 3, pp. 443-452, 1990.
-
(1990)
J. R. Stat. Soc. Ser. B Stat. Methodol.
, vol.52
, Issue.3
, pp. 443-452
-
-
Green, P.J.1
-
33
-
-
84859013628
-
3d microscopy deconvolution using richardson-lucy algorithm with total variation regularization inria, st
-
Tech. Rep
-
N. Dey, L. Blanc-Feraud, C. Zimmer, P. Roux, Z. Kam, J.-C. Olivio-Marin, and J. Zerubia, 3D microscopy deconvolution using Richardson-Lucy algorithm with total variation regularization INRIA, St. Ismier, France, 2004, Tech. Rep.
-
(2004)
Ismier, France
-
-
Dey, N.1
Blanc-Feraud, L.2
Zimmer, C.3
Roux, P.4
Kam, Z.5
Olivio-Marin, J.-C.6
Zerubia, J.7
-
34
-
-
0031289465
-
Fast iterative image restoration with a spatially-varying PSF
-
DOI 10.1117/12.279513
-
J. G. Nagy and D. P. O'Leary, F.T. Luk, Ed., "Fast iterative image restoration with a spatially varying PSF," in Adv. Sig. Proc.-Algorithms, Architectures, Implementations VII, 1997, vol. 3162, pp. 388-399, SPIE, no. 1. (Pubitemid 35017642)
-
(1997)
Proceedings of SPIE - The International Society for Optical Engineering
, vol.3162
, pp. 388-399
-
-
Nagy, J.G.1
O'Leary, D.P.2
-
35
-
-
84859046268
-
Multiview deblurring for 3D images from light sheet based fluorescence microscopy-Supporting online material Univ
-
Freibrug, Freibrug im Breisgau, Germany
-
M. Temerinac-Ott, O. Ronneberger, P. Ochs, W. Driever, T. Brox, and H. Burkhardt, Multiview deblurring for 3D images from light sheet based fluorescence microscopy-Supporting online material Univ. Freibrug, Freibrug im Breisgau, Germany, Tech. Rep. 266, 2011.
-
(2011)
Tech. Rep.
, vol.266
-
-
Temerinac-Ott, M.1
Ronneberger, O.2
Ochs, P.3
Driever, W.4
Brox, T.5
Burkhardt, H.6
-
36
-
-
71649090799
-
Multiview microscopy and multibeam manipulation for highresolution optical imaging
-
Univ.Freiburg, Freibrug im Breisgau, Germany Aug.
-
J. Huisken, "Multiview microscopy and multibeam manipulation for highresolution optical imaging," Ph.D. dissertation, Univ. Freiburg, Freibrug im Breisgau, Germany, Aug. 2004.
-
(2004)
Ph.D. Dissertation
-
-
Huisken, J.1
-
37
-
-
84859084388
-
-
Available:Registration visited Mar. 8
-
S. Preibisch, [Online]. Available: http://pacific.mpi-cbg.de/wiki/index. php/SPIM-Registration visited Mar. 8, 2011
-
(2011)
Online
-
-
Preibisch, S.1
-
38
-
-
38449091551
-
Even fluorescence excitation by multidirectional selective plane illumination microscopy (mSPIM)
-
DOI 10.1364/OL.32.002608
-
J. Huisken and D. Stainier, "Even fluorescence excitation by multidirectional selective plane illumination microscopy (MSPIM)," Opt. Lett., vol. 32, no. 17, pp. 2608-2610, Aug. 2007. (Pubitemid 351303001)
-
(2007)
Optics Letters
, vol.32
, Issue.17
, pp. 2608-2610
-
-
Huisken, J.1
Stainier, D.Y.R.2
-
39
-
-
77955172060
-
Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy
-
Aug.
-
P. J. Keller, A. D. Schmidt, A. Santella, K. Khairy, Z. Bao, J. Wittbrodt, and E. H. K. Stelzer, "Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy," Nat. Meth., vol. 7, no. 8, pp. 637-642, Aug. 2010.
-
(2010)
Nat. Meth.
, vol.7
, Issue.8
, pp. 637-642
-
-
Keller, P.J.1
Schmidt, A.D.2
Santella, A.3
Khairy, K.4
Bao, Z.5
Wittbrodt, J.6
Stelzer, E.H.K.7
-
40
-
-
79955586247
-
Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination
-
May
-
T.A. Planchon, L. Gao, D. E. Milkie, Davidson M.W., Galbraith J.A., C. G. Galbraith, and E. Betzig, "Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination," Nat. Meth., vol. 8, no. 5, pp. 417-423, May 2011.
-
(2011)
Nat. Meth.
, vol.8
, Issue.5
, pp. 417-423
-
-
Planchon, T.A.1
Gao, L.2
Milkie, D.E.3
Davidson, M.W.4
Galbraith, J.A.5
Galbraith, C.G.6
Betzig, E.7
-
41
-
-
80052298394
-
Deep and fast live imaging with two-photon scanned light-sheet microscopy
-
Jul.
-
T. V. Truong, W. Supatto, D. S. Koos, J. M. Choi, and S. E. Fraser, "Deep and fast live imaging with two-photon scanned light-sheet microscopy," Nat. Meth., vol. 8, no. 9, pp. 757-760, Jul. 2011.
-
(2011)
Nat. Meth.
, vol.8
, Issue.9
, pp. 757-760
-
-
Truong, T.V.1
Supatto, W.2
Koos, D.S.3
Choi, J.M.4
Fraser, S.E.5
|