Temperature dependence of the heat diffusivity of proteins

Journal of Physical Chemistry A

Volumn 116, Issue 11, 2012, Pages 2620-2628

  Helbing, Jan ^a   Devereux, Michael ^d   Nienhaus, Karin ^b   Nienhaus, G Ulrich ^b,c   Hamm, Peter ^a   Meuwly, Markus ^d  

^a UNIVERSITY OF ZURICH   (Switzerland)

^b KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

^c UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^d UNIVERSITY OF BASEL   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ANHARMONIC; BINDING POCKETS; CO MOLECULE; COVALENTLY BOUND; DOUBLE MUTANTS; ENERGY-TRANSFER RATE; HEAT DIFFUSIVITY; HEAT TRANSPORT; HEME PROTEINS; LOW TEMPERATURES; NON EQUILIBRIUM MOLECULAR DYNAMIC (NEMD); RATE-LIMITING STEPS; REAL SYSTEMS; SPERM WHALES; TEMPERATURE DEPENDENCE; TEMPERATURE TRENDS; VIBRATIONAL ENERGIES; VIBRATIONAL ENERGY FLOW;

ENERGY TRANSFER; MOLECULAR DYNAMICS; TEMPERATURE DISTRIBUTION;

PROTEINS;

CARBON MONOXIDE; HEME; MYOGLOBIN; SOLVENT; WATER;

ANIMAL; CHEMISTRY; CONFERENCE PAPER; ENERGY TRANSFER; GENETICS; HEAT; INFRARED RADIATION; KINETICS; MALE; MOLECULAR DYNAMICS; MUTATION; PROTEIN BINDING; PROTEIN CONFORMATION; SPERMATOZOON; THERMODYNAMICS; VIBRATION; WHALE;

ANIMALS; CARBON MONOXIDE; ENERGY TRANSFER; HEME; HOT TEMPERATURE; INFRARED RAYS; KINETICS; MALE; MOLECULAR DYNAMICS SIMULATION; MUTATION; MYOGLOBIN; PROTEIN BINDING; PROTEIN CONFORMATION; SOLVENTS; SPERMATOZOA; THERMODYNAMICS; VIBRATION; WATER; WHALES;

EID: 84858786168     PISSN: 10895639     EISSN: 15205215     Source Type: Journal    
DOI: 10.1021/jp2061877     Document Type: Conference Paper

References (42)

1. Miller, R. J. D. Annu. Rev. Phys. Chem. 1991, 42, 581-614
2. Lian, T.; Locke, B.; Kholodenko, Y.; Hochstrasser, R. M. J. Phys. Chem. 1994, 98, 11648-11656
3. Li, P.; Champion, P. M. Biophys. J. 1994, 66, 430-436
4. Mizutani, Y.; Kitagawa, T. Science 1997, 278, 443-445
5. Henry, E. R.; Eaton, W. A.; Hochstrasser, R. M. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 8982-8986
6. Ota, N.; Agard, D. A. J. Mol. Biol. 2005, 351, 345-354
7. Sharp, K.; Skinner, J. J. Proteins 2006, 65, 347-361
8. Kong, Y.; Karplus, M. Proteins 2008, 74, 145-154
9. Sagnella, D. E.; Straub, J. E. J. Phys. Chem. B 2001, 105, 7057-7063
10. Botan, V.; Backus, E. H. G.; Pfister, R.; Moretto, A.; Crisma, M.; Toniolo, C.; Nguyen, P. H.; Stock, G.; Hamm, P. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 12749-12754
11. Backus, E. H. G.; Nguyen, P. H.; Botan, V.; Pfister, R.; Moretto, A.; Crisma, M.; Toniolo, C.; Stock, G.; Hamm, P. J. Phys. Chem. B 2008, 112, 9091-9099
12. Backus, E. H. G.; Nguyen, P. H.; Botan, V.; Pfister, R.; Moretto, A.; Crisma, M.; Toniolo, C.; Zerbe, O.; Stock, G.; Hamm, P. J. Phys. Chem. B 2008, 112, 15487-15492
13. Schade, M.; Moretto, A.; Donaldson, P. M.; Toniolo, C.; Hamm, P. Nano Lett. 2010, 10, 3057-3061
14. Schade, M.; Moretto, A.; Crisma, M.; Toniolo, C.; Hamm, P. J. Phys. Chem. B 2009, 113, 13393-13397
15. Nguyen, P. H.; Park, S.-M.; Stock, G. J. Chem. Phys. 2010, 132, 025102
16. Kriegl, J. M.; Nienhaus, K.; Deng, P.; Fuchs, J.; Nienhaus, G. U. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 7069-7074
17. Helbing, J.; Nienhaus, K.; Nienhaus, G. U.; Hamm, P. J. Chem. Phys. 2005, 122, 124505
18. Hamm, P.; Kaindl, R. A.; Stenger, J. Opt. Lett. 2000, 25, 1798-1800
19. Phillips, J. C.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R. D.; Kale, L.; Schulten, K. J. Comput. Chem. 2005, 26, 1781-1802
20. MacKerell, A. D., Jr.; Bashford, D.; Bellott, M.; Dunbrack, R. L., Jr.; Evanseck, J. D.; Field, M. J.; Fischer, S.; Gao, J.; Guo, H.; Ha, S.; Joseph-McCarthy, D.; Kuchnir, L.; Kuczera, K.; Lau, F. T. K.; Mattos, C.; Michnick, S.; Ngo, T.; Nguyen, D. T.; Prodhom, B.; Reiher, W. E., III; Roux, B.; Schlenkrich, M.; Smith, J. C.; Stote, R.; Straub, J. E.; Watanabe, M.; Wiorkiewicz-Kuczera, J.; Yin, D.; Karplus, M. J. Phys. Chem. B 1998, 102, 3586
21. Nutt, D. R.; Meuwly, M. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 5998-6002
22. Jorgensen, W. L.; Chandrasekhar, J. D.; Madura, J. D.; Impey, R. W.; Klein, M. L. J. Chem. Phys. 1983, 79, 926
23. Konishi, T.; Yanagita, T. J. Stat. Mech.: Theory Exp. 2009, 09, L09001.
24. Shirts, R. B.; Burt, S. R.; Johnson, A. M. J. Chem. Phys. 2006, 125, 164102
25. Openov, L. A.; Podlivaev, A. I. Phys. Solid State 2008, 50 (6) 1195-1200
26. Uline, M. J.; Siderius, D. W.; Corti, D. S. J. Chem. Phys. 2008, 128, 124301
27. Cheng, A.; Merz, K. J. Phys. Chem. 1996, 100 (5) 1927-1937
28. Talon, C.; Zou, Q. W.; Ramos, M. A.; Villar, R.; Vieira, S. Phys. Rev. B 2001, 65, 012203
29. Andersson, O.; Johari, G. P.; Suga, H. J. Chem. Phys. 2004, 120, 9612-9617
30. Lehle, H.; Kriegl, J. M.; Nienhaus, K.; Deng, P.; Fengler, S.; Nienhaus, G. U. Biophys. J. 2005, 88 (3) 1978
31. Lim, M.; Jackson, T. A.; Anfinrud, P. A. J. Chem. Phys. 1995, 102, 4355-4366
32. Gordon, R. G. J. Chem. Phys. 1965, 43, 1307
33. Devereux, M.; Meuwly, M. J. Phys. Chem. B 2009, 113, 13061-13070
34. Sagnella, D. E.; Straub, J. E.; Jackson, T. A.; Lim, M.; Anfinrud, P. A. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 14324-14329
35. Yu, X.; Leitner, D. M. J. Phys. Chem. B 2003, 107, 1698-1707
36. Yu, X.; Leitner, D. M. J. Chem. Phys. 2005, 122, 054902
37. Leitner, D. Annu. Rev. Phys. Chem. 2008, 59, 233-259
38. Schade, M.; Hamm, P. J. Chem. Phys. 2009, 131, 044511
39. Unsworth, J.; Duarte, F. J. Am. J. Phys. 1979, 47 (11) 981-983
40. Zeller, R. C.; Pohl, R. O. Phys. Rev. B 1971, 4 (6) 2029
41. Stock, G. Phys. Rev. Lett. 2009, 102, 118301
42. Lee, M. W.; Meuwly, M. J. Phys. Chem. B 2011, 115, 5053-5061