Morphology and SSR fingerprinting of newly developed Cynara cardunculus genotypes exploitable as ornamentals

Euphytica

Volumn 184, Issue 3, 2012, Pages 311-321

  Lanteri, Sergio ^a   Portis, Ezio ^a   Acquadro, Alberto ^a   Mauro, Rosario P ^b   Mauromicale, Giovanni ^b  

^a UNIVERSITY OF TURIN   (Italy)

^b UNIVERSITY OF CATANIA   (Italy)

Author keywords

Cynara cardunculus; Molecular fingerprinting; Ornamentals; Phenotypic diversity

Indexed keywords

CYNARA CARDUNCULUS; CYNARA SCOLYMUS; SCOLYMUS;

EID: 84858621360     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-011-0509-8     Document Type: Article

References (50)

1. Acquadro A, Portis E, Lanteri S (2003) Isolation of microsatellite loci in artichoke (Cynara cardunculus L. var. scolymus). Mol Ecol Notes 3: 37-39.
2. Acquadro A, Portis E, Albertini E, Lanteri S (2005a) M-AFLP-based protocol for microsatellite loci isolation in Cynara cardunculus L. (Asteraceae). Mol Ecol Notes 5: 272-274.
3. Acquadro A, Portis E, Lee D, Donini P, Lanteri S (2005b) Development and characterization of microsatellite markers in Cynara cardunculus L. Genome 48: 217-225.
4. Acquadro A, Lanteri S, Scaglione D, Arens P, Vosman B, Portis E (2009) Genetic mapping and annotation of genomic microsatellites isolated from globe artichoke. Theor Appl Genet 118(8): 1573-1587.
5. Acquadro A, Papanice M, Lanteri S, Bottalico G, Portis E, Campanale A, Finetti-Sialer M, Mascia T, Sumerano P, Gallitelli D (2010) Production and fingerprinting of virus-free clones in a reflowering globe artichoke. Plant Cell Tiss Organ Cult 100(3): 329-337.
6. Anido F, Firpo I, Garcia S, Cointry E (1998) Estimation of genetic parameters for yield traits in globe artichoke (Cynara scolymus L.). Euphytica 103: 61-66.
7. Barba M, Di Lernia G, Babes G, Citrulli F (2004) Produzione e conservazione di germoplasma di carciofo di tipo romanesco esente da virus. Italus Hortus 11: 5-10.
8. Basnitzki J, Zohary D (1994) Breeding of seed planted artichoke. Plant Breed Rev 12: 253-269.
9. Cocker H (1967) Il carciofo pianta ornamentale. In: Medica M (ed) I International Congress on Artichoke. Minerva Medica, Bari, pp 313-317.
10. Collard B, Jahufer M, Brouwer J, Pang E (2005) An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement: the basic concepts. Euphytica 142: 169-196.
11. Comino C, Lanteri S, Portis E, Acquadro A, Romani A, Hehn A, Larbat R, Bourgaud F (2007) Isolation and functional characterization of a cDNA coding a hydroxycinnamoyltransferase involved in phenylpropanoid biosynthesis in Cynara cardunculus L. BMC Plant Biol 7: 14.
12. Comino C, Hehn A, Moglia A, Menin B, Bourgaud F, Lanteri S, Portis E (2009) The isolation and mapping of a novel hydroxycinnamoyltransferase in the globe artichoke chlorogenic acid pathway. BMC Plant Biol 9: 30.
13. Cravero V, Picardi L, Cointry E (2005) An approach for understanding the heredity of two quality traits (head color and tightness) in globe artichoke (Cynara scolymus L.). Genet Mol Biol 28: 431-434.
14. Foti S, Mauromicale G, Raccuia S, Fallico B, Fanella F, Maccarone E (1999) Possible alternative utilization of Cynara spp. I. Biomass, grain yield and chemical composition of grain. Ind Crop Prod 10: 219-228.
15. Foury C (1969) Étude de la biologie florale de l'artichaut (Cynara scolymus L.). Application a la sélection 2 partie. Étude des descendances obtenues en fécondation contrôlée. Ann Amélior Plantes 19: 23-52.
16. Foury C, Aubert S (1977) Observation préliminares sur la présence et la répartition de pigments anthocyaniques dans un mutant d'artichaut (Cynara scolymus L.) à fleurs blanches. Ann Amélior Plantes 27(5): 603-612.
17. Holm L, Loeschcke V, Bendixen C (2001) Elucidation of the molecular basis of a null allele in a rainbow trout microsatellite. Mar Biotechnol 3: 555-560.
18. Ierna A, Mauromicale G (2010) Cynara cardunculus L. genotypes as a crop for energy purposes in a Mediterranean environment. Biomass Bioenerg 34(5): 754-760.
19. Jackson JA, Matthews D (2000) Modified inter-simple sequence repeat PCR protocol for use in conjunction with the LI-COR gene ImagIR(2) DNA analyzer. Biotechniques 28: 914-916.
20. Jones A, Stockwell C, Walker D, Avise J (1998) The molecular basis of a microsatellite null allele from the white sands pupfish. J Hered 89: 339-342.
21. Lanteri S, Portis E (2008) Globe Artichoke and Cardoon. In: Springer (ed) Vegetables I, vol 1. Springer, New York, pp 49-74.
22. Lanteri S, Di Leo I, Ledda L, Mameli M, Portis E (2001) RAPD variation within and among populations of globe artichoke cultivar 'Spinoso sardo'. Plant Breeding 120: 243-246.
23. Lanteri S, Acquadro A, Saba E, Portis E (2004a) Molecular fingerprinting and evaluation of genetic distances among selected clones of globe artichoke (Cynara cardunculus L. var. scolymus L.). J Hortic Sci Biotech 79: 863-870.
24. Lanteri S, Saba E, Cadinu M, Mallica G, Baghino L, Portis E (2004b) Amplified fragment length polymorphism for genetic diversity assessment in globe artichoke. Theor Appl Genet 108: 1534-1544.
25. Lanteri S, Acquadro A, Comino C, Mauro R, Mauromicale G, Portis E (2006) A first linkage map of globe artichoke (Cynara cardunculus var. scolymus L.) based on AFLP, S-SAP, M-AFLP and microsatellite markers. Theor Appl Genet 112: 1532-1542.
26. Lattanzio V, Kroon PA, Linsalata V, Cardinali A (2009) Globe artichoke: a functional food and source of nutraceutical ingredients. J Funct Food 1: 131-144.
27. Lombardo S, Pandino G, Mauromicale G, Knödler M, Carle R, Schieber M (2010) Influence of genotype, harvest time and plant part on polyphenolic composition of globe artichoke [Cynaracardunculus var. scolymus (L.) Fiori]. Food Chem 119: 1175-1181.
28. Maccarone E, Fallico B, Fanella F, Mauromicale G, Raccuia S, Foti S (1999) Possible alternative utilization of Cynara spp. II. Chemical characterization of their grain oil. Ind Crop Prod 10(1999): 229-237.
29. Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Res 27: 209-220.
30. Mauro R, Portis E, Acquadro A, Lombardo S, Mauromicale G, Lanteri S (2009) Genetic diversity of globe artichoke landraces from Sicilian small-holdings: implications for evolution and domestication of the species. Conserv Genet 10: 431-440.
31. Mauro R, Lombardo S, Longo AMG, Pandino G, Mauromicale G (2011) New cropping designs of globe artichoke for industrial use. Ital J Agron 6: e8.
32. Mauromicale G, Ierna A (2000) Panorama varietale e miglioramento genetico del carciofo. Informatore agrario 26: 39-45.
33. Menin B, Comino C, Moglia A, Dolzhenko Y, Portis E, Lanteri S (2010) Identification and mapping of genes related to caffeoylquinic acid synthesis in Cynara cardunculus L. Plant Sci 178: 338-347.
34. Pandino G, Courts F, Lombardo S, Mauromicale G, Williamson G (2010) Caffeoylquinic acids and flavonoids in the immature inflorescence of globe artichoke, wild cardoon, and cultivated cardoon. J Agric Food Chem 58: 1026-1031.
35. Papanice MA, Campanale A, Bottalico G, Sumerano P, Gallitelli D (2004) Production of virus-free artichoke germplasm cv Brindisino (Cynara scolymus L.; Apulia). Italus Hortus 11(5): 11-15.
36. Peakall R, Smouse P (2006) GENALEX 6: genetic analysis in excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
37. Pekkinen M, Varvio S, Kulju K, Karkkainen H, Smolander S, Vihera-Aarnio A, Koski V, Sillanpaa M (2005) Linkage map of birch, Betula pendula Roth, based on microsatellites and amplified fragment length polymorphisms. Genome 48: 619-625.
38. Pemberton J, Slate J, Bancroft D, Barrett J (1995) Non-amplifying alleles at microsatellite loci-a caution for parentage and population studies. Mol Ecol 4: 249-252.
39. Pochard E, Foury C, Chambonet D (1969) Il miglioramento genetico del carciofo. Proceedings the 1 Congresso Internazionale sul carciofo-Bari-Italy, pp 117-155.
40. Porceddu E, Dellacecca V, Bianco V (1976) Classificazione numerica di cultivar di carciofo. Proceedings II International Congress on Artichoke, Ed Minerva Medica, Torino pp 1105-1119.
41. Portis E, Barchi L, Acquadro A, Macua J, Lanteri S (2005a) Genetic diversity assessment in cultivated cardoon by AFLP (Amplified Fragment Length Polymorphism) and microsatellite markers. Plant Breed 124: 299-304.
42. Portis E, Acquadro A, Comino C, Mauromicale G, Saba E, Lanteri S (2005b) Genetic structure of island populations of wild cardoon [Cynara cardunculus L. var. sylvestris (Lamk) Fiori] detected by AFLPs and SSRs. Plant Sci 169: 199-210.
43. Portis E, Mauromicale G, Barchi L, Mauro R, Lanteri S (2005c) Population structure and genetic variation in autochthonous globe artichoke germplasm from Sicily Island. Plant Sci 168: 1591-1598.
44. Portis E, Mauromicale G, Mauro R, Acquadro A, Scaglione D, Lanteri S (2009) Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus). Theor Appl Genet 120(1): 59-70.
45. Rodzen J, May B (2002) Inheritance of microsatellite loci in the white sturgeon (Acipensertransmontanus). Genome 45: 1064-1076.
46. Rohlf FJ (1998) NTSYSpc Version 2. 0: User Guide. Applied Biostatistics Inc.
47. Shaw P, Turan C, Wright J, O'Connell M, Carvalho G (1999) Microsatellite DNA analysis of population structure in Atlantic herring (Clupea harengus), with direct comparison to allozyme and mtDNA RFLP analyses. Heredity 83: 490-499.
48. Smouse P, Peakall R (1999) Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. Heredity 82: 561-573.
49. Sneath PHA, Sokal RR (1973) Numerical taxonomy-the principles and practice of numerical classification. W, H. Freeman, San Francisco.
50. van Oosterhout C, Hutchinson W, Wills D, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Notes, vol 4. Wiley, New York, pp 535-538.