Autosomal STR allele frequencies for the CODIS system from a large random population sample in Chile

Forensic Science International: Genetics

Volumn 6, Issue 3, 2012, Pages

  Vergara, Ismael A ^a   Villouta, Pamela ^b   Herrera, Sandra ^b   Melo, Francisco ^a,b  

^a PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE   (Chile)

^b TAAG Genetics SA   (Chile)

Author keywords

Chilean population; Combined DNA index system; CSF1PO; D13S317; D16S539; D18S51; D21S11; D3S1358; D5S818; D7S820; D8S1179; FGA; Short tandem repeat population data; TH01; TPOX; vWA

Indexed keywords

ALLELE; AUTOSOME; CHILE; GENE FREQUENCY; GENE LOCUS; HETEROZYGOSITY; HUMAN; HUMAN TISSUE; LETTER; MALE; PATERNITY TEST; PRIORITY JOURNAL;

CHILE; DATABASES, NUCLEIC ACID; DNA FINGERPRINTING; GENE FREQUENCY; GENETICS, POPULATION; HUMANS; MALE; MICROSATELLITE REPEATS; POLYMERASE CHAIN REACTION;

EID: 84858445501     PISSN: 18724973     EISSN: 18780326     Source Type: Journal    
DOI: 10.1016/j.fsigen.2011.07.002     Document Type: Letter

References (23)

1. M. Nei Estimation of average heterozygosity and genetic distance from a small number of individuals Genetics 89 1978 583 590 (Pubitemid 8396073)
2. A. Edwards, H.A. Hammond, L. Jin, C.T. Caskey, and R. Chakraborty Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups Genomics 12 1992 241 253
3. A. Lancaster, M.P. Nelson, D. Meyer, G. Thomson, and R.M. Single PyPop: a software framework for population genomics: analyzing large-scale multi-locus genotype data Pac. Symp. Biocomput. 51 2003 4 25
4. D. Botstein, R.L. White, M. Skolnick, and R.W. Davis Construction of a genetic linkage map in man using restriction fragment length polymorphisms Am. J. Hum. Genet. 32 1980 314 331 (Pubitemid 11105557)
5. K. Huston Statistical analysis of STR data Profiles DNA 1 1998 14 15
6. M. Raymond, and F. Rousset An exact test for population differentiation Evolution 49 1995 1280 1283 (Pubitemid 3025486)
7. H. Jorquera, and B. Budowle Chilean population data on ten PCR-based loci J. Forensic Sci. 43 1998 171 173 (Pubitemid 28063721)
8. L. Cifuentes, M. Acuna, and D. Sepulveda Allele frequencies for six STR in a Chilean population J. Forensic Sci. 47 2002 904 905 (Pubitemid 34760926)
9. J.M. Butler, R. Schoske, P.M. Vallone, J.W. Redman, and M.C. Kline Allele frequencies for 15 autosomal STR loci on U.S. Caucasian African American, and Hispanic populations J. Forensic Sci. 48 2003 908 911 (Pubitemid 36801494)
10. M. Marino, A. Sala, and D. Corach Population genetic analysis of 15 autosomal STRs loci in the central region of Argentina Forensic Sci. Int. 161 2006 72 77 (Pubitemid 44107673)
11. L. Perez, J. Hau, F. Izarra, O. Ochoa, U. Zubiate, and O. Garcia Allele frequencies for the 13 CODIS STR loci in Peru Forensic Sci. Int. 132 2003 164 165 (Pubitemid 36438706)
12. M. Rey, A. Gutierrez, B. Schroeder, W. Usaquen, A. Carracedo, I. Bustos, and A. Giraldo Allele frequencies for 13 STR's from two Colombian populations Bogota and Boyaca Forensic Sci. Int. 136 2003 83 85 (Pubitemid 37101299)
13. M.R. Whittle, N.L. Romano, and V.A. Negreiros Updated Brazilian genetic data together with mutation rates, on 19 STR loci, including D10S1237 Forensic Sci. Int. 139 2004 207 210 (Pubitemid 38201124)
14. M.A. Chiurillo, A. Morales, A.M. Mendes, N. Lander, F. Tovar, A. Fuentes, and J.L. Ramirez Genetic profiling of a central Venezuelan population using 15 STR markers that may be of forensic importance Forensic Sci. Int. 136 2003 99 101 (Pubitemid 37101304)
15. F. Gonzalez-Andrade, D. Sanchez, and B. Martinez-Jarreta Genetic profile of the Ecuadorian Mestizo population (Ecuador-South America) by using the Power Plex 16 System Kit Forensic Sci. Int. 135 2003 64 66 (Pubitemid 36957847)
16. M. Raymond, and F. Rousset GENEPOP (Version 1.2) population genetics software for exact tests and ecumenicism J. Hered. 86 1995 248 249
17. R.K. Roby, S.D. Gonzalez, N.R. Phillips, J.V. Planz, J.L. Thomas, J.A.P. Astudillo, J. Ge, E.A. Morales, A.J. Eisenberg, R. Chakraborty, P. Bustos, and B. Budowle Autosomal STR allele frequencies and Y-STR and mtDNA haplotypes in Chilean sample populations Forensic Science International: Genetics Supplement Series 2 2009 pp. 532-533
18. B.S. Weir Genetic Data Analysis II 1996 Sinauer Associates Sunderland, MA
19. C. Promega, GenePrint STR Systems (sylver stain detection), Technical Manual, Allele Frequencies for Caucasian-American, 2001.
20. W. Bar, B. Brinkmann, B. Budowle, A. Carracedo, P. Gill, P. Lincoln, W. Mayr, and B. Olaisen DNA recommendations: further report of the DNA commission of the ISFH regarding the use of short tandem repeat systems. International Society for Forensic Haemogenetics Int. J. Leg. Med. 110 1997 175 176 (Pubitemid 27323768)
21. P. Gill, B. Brinkmann, E. d'Aloja, J. Andersen, W. Bar, A. Carracedo, B. Dupuy, B. Eriksen, M. Jangblad, V. Johnsson, A.D. Kloosterman, P. Lincoln, N. Morling, S. Rand, M. Sabatier, R. Scheithauer, P. Schneider, and M.C. Vide Considerations from the European DNA profiling group (EDNAP) concerning STR nomenclature Forensic Sci. Int. 87 1997 185 192 (Pubitemid 27294593)
22. B. Olaisen, W. Bar, B. Brinkmann, B. Budowle, A. Carracedo, P. Gill, P. Lincoln, W.R. Mayr, and S. Rand DNA recommendations 1997 of the International Society for Forensic Genetics Vox Sang. 74 1998 61 63 (Pubitemid 28033389)
23. A. Carracedo, J.M. Butler, L. Gusmao, W. Parson, L. Roewer, and P.M. Schneider Publication of population data for forensic purposes Forensic Sci. Int. Genet. 4 2010 145 147