Microsatellites for mahoganies: Twelve new loci for Swietenia macrophylla and its high transferability to Khaya senegalensis

American Journal of Botany

Volumn 98, Issue 8, 2011, Pages

  Lemes, Maristerra R ^a,d   Esashika, Thana ^a   Gaoue, Orou G ^b,c,e  

^a INSTITUTO NACIONAL DE PESQUISAS DA AMAZÔNIA   (Brazil)

^b UNIVERSITY OF HAWAII   (United States)

^c Université de Parakou   (Benin)

^d INSTITUTO DE PESQUISAS JARDIM BOTÂNICO DO RIO DE JANEIRO   (Brazil)

^e Department of Biology   (United States)

Author keywords

Cross amplification; Khaya senegalensis; Meliaceae; SSR loci; Swietenia macrophylla; Threatened tropical trees

Indexed keywords

MICROSATELLITE DNA; PLANT DNA;

ALLELE; CONSERVATION GENETICS; ENDANGERED SPECIES; EVERGREEN TREE; GENE FLOW; GENE TRANSFER; GENETIC MARKER; HETEROZYGOSITY; REPRODUCTIVE STRATEGY; TIMBER; TROPICAL ENVIRONMENT;

ALLELE; ARTICLE; ENDANGERED SPECIES; GENE FREQUENCY; GENE LOCUS; GENETIC POLYMORPHISM; GENETICS; HETEROZYGOTE; HETEROZYGOTE DETECTION; INHERITANCE; MELIACEAE; METHODOLOGY; PLANT LEAF; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYMERASE CHAIN REACTION; SPECIES DIFFERENCE;

ALLELES; DNA, PLANT; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ENDANGERED SPECIES; GENE FREQUENCY; GENETIC LOCI; HETEROZYGOTE; HETEROZYGOTE DETECTION; INHERITANCE PATTERNS; MELIACEAE; MICROSATELLITE REPEATS; PLANT LEAVES; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; SPECIES SPECIFICITY;

KHAYA SENEGALENSIS; MELIACEAE; SWIETENIA; SWIETENIA MACROPHYLLA;

EID: 84858405044     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.1100074     Document Type: Article

References (9)

1. Creste, S., A. Tulmann-Neto, and A. Figueira. 2001. Detection of single sequence repeat polymorphisms in denaturing polyacrylamide sequencing gels by silver staining. Plant Molecular Biology Reporter 19: 299-306.
2. Doyle, J. J., and J. L. Doyle. 1987. Isolation of plant DNA from fresh tissue. Focus (San Francisco, Calif.) 12: 13-15.
3. Gaoue, O. G., and T. Ticktin. 2007. Patterns of harvesting foliage and bark from the multipurpose tree Khaya senegalensis in Benin: variation across ecological regions and its impacts on population structure. Biological Conservation 137: 424-436.
4. Goudet, J. 2000. FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.1). Available from http://www.unil. ch/izea/softwares/fstat.html. Updated from Goudet (1995).
5. Lemes, M. R., R. P. V. Brondani, and D. Grattapaglia. 2002. Multiplexed systems of microsatellite markers for genetic analysis of mahogany, Swietenia macrophylla King (Meliaceae), a threatened Neotropical timber species. The Journal of Heredity 93: 287-291.
6. Lemes, M. R., R. Gribel, J. Proctor, and D. Grattapaglia. 2003. Population genetic structure of mahogany (Swietenia macrophylla King, Meliaceae) across the Brazilian Amazon, based on variation at microsatellite loci: implications for conservation. Molecular Ecology 12: 2875-2883.
7. Muellner, A. N., R. Samuel, S. A. Johnson, M. Cheek, T. D. Pennington, and M. W. Chase. 2003. Molecular phylogenetics of Meliaceae (Sapindales) based on nuclear and plastid DNA sequences. American Journal of Botany 90: 471-480.
8. Pennington, T. D. 1981. A monograph of the Neotropical Meliaceae. In: T. D. Pennington, B. T. Styles, and D. A. H. Taylor [eds], Flora Neotropica Monograph 28: Meliaceae. The New York Botanical Garden, New York.
9. Sexton, G. J., C. H. Frere, M. J. Dieters, I. D. Godwin, and P. J. Prentis. 2010. Development and characterization of microsatellite loci for Khaya senegalensis (Meliaceae). American Journal of Botany 97: e111-e113.