-
1
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
DOI 10.1006/jmbi.1999.3110
-
Wright PE, Dyson JH (1999) Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm. J Mol Biol 293:321-331. (Pubitemid 29516173)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.2
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
2
-
-
25144472591
-
Showing your ID: Intrinsic disorder as an Id for recognition, regulation and cell signaling
-
Uversky VU, Oldfiend CJ, Dunker AK (2005) Showing your ID: intrinsic disorder as an Id for recognition, regulation and cell signaling. J Mol Recognit 18:343-384.
-
(2005)
J Mol Recognit
, vol.18
, pp. 343-384
-
-
Uversky, V.U.1
Oldfiend, C.J.2
Dunker, A.K.3
-
3
-
-
0035022941
-
Intrinsically disordered protein
-
DOI 10.1016/S1093-3263(00)00138-8, PII S1093326300001388
-
Dunker AK, et al. (2001) Intrinsically disordered protein. J Mol Graph Model 19:26-59. (Pubitemid 32411501)
-
(2001)
Journal of Molecular Graphics and Modelling
, vol.19
, Issue.1
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
Ausio, J.11
Nissen, M.S.12
Reeves, R.13
Kang, C.14
Kissinger, C.R.15
Bailey, R.W.16
Griswold, M.D.17
Chiu, W.18
Garner, E.C.19
Obradovic, Z.20
more..
-
5
-
-
33744961763
-
Intrinsic disorder in transcription factors
-
DOI 10.1021/bi0602718
-
Liu J, et al. (2006) Intrinsic disorder in transcription factors. Biochemistry 45:6873-6888. (Pubitemid 43856673)
-
(2006)
Biochemistry
, vol.45
, Issue.22
, pp. 6873-6888
-
-
Liu, J.1
Perumal, N.B.2
Oldfield, C.J.3
Su, E.W.4
Uversky, V.N.5
Dunker, A.K.6
-
6
-
-
76249126819
-
Conformational spread as a mechanism for cooperativity in the bacterial flagellar switch
-
Bai F, et al. (2010) Conformational spread as a mechanism for cooperativity in the bacterial flagellar switch. Science 327:685-689.
-
(2010)
Science
, vol.327
, pp. 685-689
-
-
Bai, F.1
-
7
-
-
33746911627
-
Dynamic coupling and allosteric behavior in a nonallosteric protein
-
DOI 10.1021/bi060652l
-
Clarkson MW, Gilmore SA, Edgell MH, Lee AL (2006) Dynamic coupling and allosteric behavior in a nonallosteric protein. Biochemistry 45:7693-7699. (Pubitemid 44185485)
-
(2006)
Biochemistry
, vol.45
, Issue.25
, pp. 7693-7699
-
-
Clarkson, M.W.1
Gilmore, S.A.2
Edgell, M.H.3
Lee, A.L.4
-
8
-
-
0021658956
-
Allostery without conformational change. A plausible model
-
Cooper A, Dryden DT (1984) Allostery without conformational change. A plausible model. Eur Biophys J 11:103-109.
-
(1984)
Eur Biophys J
, vol.11
, pp. 103-109
-
-
Cooper, A.1
Dryden, D.T.2
-
9
-
-
79952361572
-
Competing allosteric mechanisms modulate substrate binding in a dimeric enzyme
-
Freiburger LA, et al. (2011) Competing allosteric mechanisms modulate substrate binding in a dimeric enzyme. Nat Struct Mol Biol 18:288-294.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 288-294
-
-
Freiburger, L.A.1
-
10
-
-
46649105245
-
Allosteric signaling in the biotin repressor occurs via local folding coupled to global dampening of protein dynamics
-
Laine O, Streaker ED, Nabavi M, Fenselau CC, Beckett D (2008) Allosteric signaling in the biotin repressor occurs via local folding coupled to global dampening of protein dynamics. J Mol Biol 381:89-101.
-
(2008)
J Mol Biol
, vol.381
, pp. 89-101
-
-
Laine, O.1
Streaker, E.D.2
Nabavi, M.3
Fenselau, C.C.4
Beckett, D.5
-
11
-
-
0034710950
-
Binding sites in Escherichia coli dihydrofolate reductase communicate by modulating the conformational ensemble
-
Pan H, Lee JC, Hilser VJ (2000) Binding sites in Escherichia coli dihydrofolate reductase communicate by modulating the conformational ensemble. Proc Natl Acad Sci USA 97:12020-12025.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 12020-12025
-
-
Pan, H.1
Lee, J.C.2
Hilser, V.J.3
-
12
-
-
33748363077
-
Dynamically driven protein allostery
-
DOI 10.1038/nsmb1132, PII NSMB1132
-
Popovych N, Sun S, Ebright RH, Kalodimos CG (2006) Dynamically driven protein allostery. Nat Struct Mol Biol 13:831-838. (Pubitemid 44338778)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.9
, pp. 831-838
-
-
Popovych, N.1
Sun, S.2
Ebright, R.H.3
Kalodimos, C.G.4
-
13
-
-
76049113822
-
The induction of folding cooperativity by ligand binding drives the allosteric response of tetracycline repressor
-
Reichheld SE, Yu Z, Davidson AR (2009) The induction of folding cooperativity by ligand binding drives the allosteric response of tetracycline repressor. Proc Natl Acad Sci USA 106:22263-22268.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 22263-22268
-
-
Reichheld, S.E.1
Yu, Z.2
Davidson, A.R.3
-
14
-
-
64849111005
-
Sending signals dynamically
-
Smock RG, Gierasch LM (2009) Sending signals dynamically. Science 324(5924): 198-203.
-
(2009)
Science
, vol.324
, Issue.5924
, pp. 198-203
-
-
Smock, R.G.1
Gierasch, L.M.2
-
16
-
-
78349276506
-
On the mechanism of protein fold-switching by a molecular sensor
-
Stratton MM, Loh SN (2010) On the mechanism of protein fold-switching by a molecular sensor. Proteins 78:3260-3269.
-
(2010)
Proteins
, vol.78
, pp. 3260-3269
-
-
Stratton, M.M.1
Loh, S.N.2
-
17
-
-
80053898470
-
Binding-folding induced regulation of AF1 transactivation domain of the glucocorticoid receptor by a cofactor that binds to its DNA binding domain
-
Garza AS, Khan SH, Moure CM, Edwards DP, Kumar R (2011) Binding-folding induced regulation of AF1 transactivation domain of the glucocorticoid receptor by a cofactor that binds to its DNA binding domain. PLoS ONE 6:e25875.
-
(2011)
PLoS ONE
, vol.6
-
-
Garza, A.S.1
Khan, S.H.2
Moure, C.M.3
Edwards, D.P.4
Kumar, R.5
-
18
-
-
69649097791
-
7TM receptor allostery: Putting numbers to shapeshifting proteins
-
Kenakin TP (2009) '7TM receptor allostery: Putting numbers to shapeshifting proteins. Trends Pharmacol Sci 30:460-469.
-
(2009)
Trends Pharmacol Sci
, vol.30
, pp. 460-469
-
-
Kenakin, T.P.1
-
19
-
-
77952354490
-
Seven transmembrane receptors as shapeshifting proteins: The impact of allosteric modulation and functional selectivity on new drug discovery
-
Kenakin T, Miller LJ (2010) Seven transmembrane receptors as shapeshifting proteins: The impact of allosteric modulation and functional selectivity on new drug discovery. Pharmacol Rev 62:265-304.
-
(2010)
Pharmacol Rev
, vol.62
, pp. 265-304
-
-
Kenakin, T.1
Miller, L.J.2
-
20
-
-
0031432471
-
Transcription factors: An overview
-
Latchman DS (1997) Transcription factors: An overview. Int J Biochem Cell B 29:1305-1312.
-
(1997)
Int J Biochem Cell B
, vol.29
, pp. 1305-1312
-
-
Latchman, D.S.1
-
21
-
-
37849189323
-
Selective estrogen receptor modulators and postmenopausal women's health
-
Hol T, Cox MB, Bryant HU, Draper MW (1997) Selective estrogen receptor modulators and postmenopausal women's health. J Womens Health 6:523-531.
-
(1997)
J Womens Health
, vol.6
, pp. 523-531
-
-
Hol, T.1
Cox, M.B.2
Bryant, H.U.3
Draper, M.W.4
-
22
-
-
0031136676
-
Antiestrogens: Mechanisms of action and resistance in breast cancer
-
DOI 10.1023/A:1005835428423
-
Katzenellenbogen BS, Montano MM, Ekena K, Herman ME, McInerney ME (1997) Antiestrogens: Mechanisms of action and resistance in breast cancer. Breast Cancer Res Tr 44:23-38. (Pubitemid 27179766)
-
(1997)
Breast Cancer Research and Treatment
, vol.44
, Issue.1
, pp. 23-38
-
-
Katzenellenbogen, B.S.1
Montano, M.M.2
Ekena, K.3
Herman, M.E.4
McInerney, E.M.5
-
23
-
-
20844437424
-
Translational regulatory mechanisms generate N-terminal glucocorticoid receptor isoforms with unique transcriptional target genes
-
DOI 10.1016/j.molcel.2005.03.025, PII S1097276505012189
-
Lu NZ, Cidlowski JA (2005) Translational regulatory mechanisms generate N-terminal glucocorticoid receptor isoforms with unique transcriptional target genes. Mol Cell 18:331-342. (Pubitemid 41350538)
-
(2005)
Molecular Cell
, vol.18
, Issue.3
, pp. 331-342
-
-
Lu, N.Z.1
Cidlowski, J.A.2
-
24
-
-
25844509287
-
Analysis of estrogen agonism and antagonism of tamoxifen, raloxifene, and ICI182780 in endometrial cancer cells: A putative role for the epidermal growth factor receptor ligand amphiregulin
-
DOI 10.1016/j.jsgi.2005.08.003, PII S1071557605002364
-
Gielen SC, Burger CW, Kuhne LC, Moghaddam P, Blok LJ (2005) Analysis of estrogen agonism and antagonism of Tamoxifen, Raloxifene, and ICI182780 in endometrial cancer cells: A putative role for the epidermal growth factor receptor ligand amphiregulin. Society for Gynecologic Investigation 12:e55-66. (Pubitemid 41395247)
-
(2005)
Journal of the Society for Gynecologic Investigation
, vol.12
, Issue.7
-
-
Gielen, S.C.J.P.1
Burger, C.W.2
Kuhne, L.C.M.3
Hanifi-Moghaddam, P.4
Blok, L.J.5
-
25
-
-
78651189765
-
On the nature of allosteric transitions: A plausible model
-
Monod J, Wyman J, Changeux JP (1965) On the nature of allosteric transitions: A plausible model. J Mol Biol 12:88-118.
-
(1965)
J Mol Biol
, vol.12
, pp. 88-118
-
-
Monod, J.1
Wyman, J.2
Changeux, J.P.3
-
26
-
-
0013863816
-
Comparison of experimental binding data and theoretical models in proteins containing subunits
-
Koshland DE, Nemethy G, Filmer D (1966) Comparison of experimental binding data and theoretical models in proteins containing subunits. Biochemistry 5:365-385.
-
(1966)
Biochemistry
, vol.5
, pp. 365-385
-
-
Koshland, D.E.1
Nemethy, G.2
Filmer, D.3
-
27
-
-
48249141040
-
Allostery and cooperativity revisited
-
Cui Q, Karplus M (2008) Allostery and cooperativity revisited. Protein Sci 17:1295-1307.
-
(2008)
Protein Sci
, vol.17
, pp. 1295-1307
-
-
Cui, Q.1
Karplus, M.2
-
29
-
-
24944446722
-
-
Wiley-VCH, Weinheim, FRG
-
Cesareni G, Gimona M, Sudol M, Yaffe M, eds. (2005) Modular Protein Domains (Wiley-VCH, Weinheim, FRG).
-
(2005)
Modular Protein Domains
-
-
Cesareni, G.1
Gimona, M.2
Sudol, M.3
Yaffe, M.4
-
30
-
-
0004244695
-
-
University Science Books, Mill Valley, CA, 10 Ed.
-
Wyman JGS (1990) Binding and Linkage (University Science Books, Mill Valley, CA), 10 Ed.
-
(1990)
Binding and Linkage
-
-
Wyman, J.G.S.1
-
31
-
-
70350131719
-
Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins
-
Schrank TP, Bolen DW, Hilser VJ (2009) Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins. Proc Natl Acad Sci USA 106:16984-16989.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 16984-16989
-
-
Schrank, T.P.1
Bolen, D.W.2
Hilser, V.J.3
-
32
-
-
79951986441
-
Strategies for the thermodynamic characterization of linked binding/local folding reactions within the native state: Application to the LID domain of adenylate kinase from Escherichia coli
-
Schrank TP, Elam WA, Li J, Hilser VJ (2011) Strategies for the thermodynamic characterization of linked binding/local folding reactions within the native state: application to the LID domain of adenylate kinase from Escherichia coli. Method Enzymol 492:253-282.
-
(2011)
Method Enzymol
, vol.492
, pp. 253-282
-
-
Schrank, T.P.1
Elam, W.A.2
Li, J.3
Hilser, V.J.4
-
33
-
-
70450191983
-
Dynamic activation of an allosteric regulatory protein
-
Tzeng SR, Kalodimos CG (2009) Dynamic activation of an allosteric regulatory protein. Nature 462:368-372.
-
(2009)
Nature
, vol.462
, pp. 368-372
-
-
Tzeng, S.R.1
Kalodimos, C.G.2
-
34
-
-
1842539352
-
A Linear Correlation between the Energetics of Allosteric Communication and Protein Flexibility in the Escherichia coli Cyclic AMP Receptor Protein Revealed by Mutation-Induced Changes in Compressibility and Amide Hydrogen-Deuterium Exchange
-
DOI 10.1021/bi036271e
-
Gekko K, Obu N, Li J, Lee JC (2004) A linear correlation between the energetics of allosteric communication and protein flexibility in the Escherichia coli cyclic AMP receptor protein revealed by mutation-induced changes in compressibility and amide hydrogen-deuterium exchange. Biochemistry 43:3844-3852. (Pubitemid 38437050)
-
(2004)
Biochemistry
, vol.43
, Issue.13
, pp. 3844-3852
-
-
Gekko, K.1
Obu, N.2
Li, J.3
Lee, J.C.4
-
35
-
-
0036088602
-
The linkage between protein folding and functional cooperativity: Two sides of the same coin?
-
DOI 10.1146/annurev.biophys.31.082901.134215
-
Luque I, Leavitt SA, Freire E (2002) The linkage between protein folding and functional cooperativity: two sides of the same coin? Annu Rev Biophys Biomol Struct 31:235-256. (Pubitemid 34666832)
-
(2002)
Annual Review of Biophysics and Biomolecular Structure
, vol.31
, pp. 235-256
-
-
Luque, I.1
Leavitt, S.A.2
Freire, E.3
-
36
-
-
65249167505
-
DNA binding site sequence directs glucocorticoid receptor structure and activity
-
Meijsing SH, et al. (2009) DNA binding site sequence directs glucocorticoid receptor structure and activity. Science 324:407-410.
-
(2009)
Science
, vol.324
, pp. 407-410
-
-
Meijsing, S.H.1
-
37
-
-
78549288109
-
Steroid hormone receptors in cancer development: A target for cancer therapeutics
-
Ahmad A, Kumar R (2011) Steroid hormone receptors in cancer development: A target for cancer therapeutics. Cancer Lett 300:1-9.
-
(2011)
Cancer Lett
, vol.300
, pp. 1-9
-
-
Ahmad, A.1
Kumar, R.2
|