-
1
-
-
0344719444
-
Evolution of mitochondrial gene content: Gene loss and transfer to the nucleus
-
DOI 10.1016/S1055-7903(03)00194-5
-
Adams KL, Palmer JD. 2003. Evolution of mitochondrial gene content: gene loss and transfer to the nucleus. Mol Phylogenet Evol. 29(3):380-395. (Pubitemid 37491885)
-
(2003)
Molecular Phylogenetics and Evolution
, vol.29
, Issue.3
, pp. 380-395
-
-
Adams, K.L.1
Palmer, J.D.2
-
2
-
-
0028220048
-
Synonymous codon usage in Drosophila melanogaster: Natural selection and translational accuracy
-
Akashi H. 1994. Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy. Genetics 136:927-935. (Pubitemid 24085643)
-
(1994)
Genetics
, vol.136
, Issue.3
, pp. 927-935
-
-
Akashi, H.1
-
3
-
-
0037471674
-
The function of genomes in bioenergetic organelles
-
discussion. 37-38
-
Allen JF. 2003. The function of genomes in bioenergetic organelles. Philos Trans R Soc Lond B Biol Sci. 358(1429):19-37 ; discussion. 37-38.
-
(2003)
Philos Trans R Soc Lond B Biol Sci.
, vol.358
, Issue.1429
, pp. 19-37
-
-
Allen, J.F.1
-
4
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
DOI 10.1038/290457a0
-
Anderson S, et al. 1981. Sequence and organization of the human mitochondrial genome. Nature 290:457-465. (Pubitemid 11159074)
-
(1981)
Nature
, vol.290
, Issue.5806
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
-
5
-
-
67650927396
-
Epistatic interactions modulate the evolution of mammalian mitochondrial respiratory complex components
-
Azevedo L, et al. 2009. Epistatic interactions modulate the evolution of mammalian mitochondrial respiratory complex components. BMC Genomics. 13(10):266.
-
(2009)
BMC Genomics.
, vol.13
, Issue.10
, pp. 266
-
-
Azevedo, L.1
-
6
-
-
34347326060
-
Mitochondrial DNA variation is associated with measurable differences in life-history traits and mitochondrial metabolism in Drosophila simulans
-
DOI 10.1111/j.1558-5646.2007.00133.x
-
Ballard JW, Melvin RG, Katewa SD, Maas K. 2007. Mitochondrial DNA variation is associated with measurable differences in life-history traits and mitochondrial metabolism in Drosophila simulans. Evolution 61:1735-1747. (Pubitemid 47013468)
-
(2007)
Evolution
, vol.61
, Issue.7
, pp. 1735-1747
-
-
Ballard, J.W.O.1
Melvin, R.G.2
Katewa, S.D.3
Maas, K.4
-
7
-
-
70349611306
-
Climate shaped the worldwide distribution of human mitochondrial DNA sequence variation
-
Balloux F, Handley LJ, Jombart T, Liu H, Manica A. 2009. Climate shaped the worldwide distribution of human mitochondrial DNA sequence variation. Proc Biol Sci. 276:3447-3455.
-
(2009)
Proc Biol Sci.
, vol.276
, pp. 3447-3455
-
-
Balloux, F.1
Handley, L.J.2
Jombart, T.3
Liu, H.4
Manica, A.5
-
8
-
-
32944456059
-
Inheritance and recombination of mitochondrial genomes in plants, fungi and animals
-
Barr CM, Neiman M, Taylor DR. 2005. Inheritance and recombination of mitochondrial genomes in plants, fungi and animals. New Phytol. 168(1):39-50.
-
(2005)
New Phytol.
, vol.168
, Issue.1
, pp. 39-50
-
-
Barr, C.M.1
Neiman, M.2
Taylor, D.R.3
-
9
-
-
0032486399
-
Human xenomitochondrial cybrids: Cellular models of mitochondrial complex I deficiency
-
DOI 10.1074/jbc.273.23.14210
-
Barrientos A, Kenyon L, Moraes CT. 1998. Human xenomitochondrial cybrids. Cellular models of mitochondrial complex I deficiency. J Biol Chem. 273(23):14210-14217. (Pubitemid 28319132)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.23
, pp. 14210-14217
-
-
Barrientos, A.1
Kenyon, L.2
Moraes, C.T.3
-
10
-
-
33646253454
-
Population size does not influence mitochondrial genetic diversity in animals
-
Bazin E, Glémin S, Galtier N. 2006. Population size does not influence mitochondrial genetic diversity in animals. Science 312:570-572.
-
(2006)
Science
, vol.312
, pp. 570-572
-
-
Bazin, E.1
Glémin, S.2
Galtier, N.3
-
11
-
-
0016187379
-
Mechanism of mitochondrial DNA replication in mouse L-cells: Asynchronous replication of strands, segregation of circular daughter molecules, aspects of topology and turnover of an initiation sequence
-
Berk AJ, Clayton DA. 1974. Mechanism of mitochondrial DNA replication in mouse L-cells: asynchronous replication of strands, segregation of circular daughter molecules, aspects of topology and turnover of an initiation sequence. J Mol Biol. 86:801-824.
-
(1974)
J Mol Biol.
, vol.86
, pp. 801-824
-
-
Berk, A.J.1
Clayton, D.A.2
-
12
-
-
33845340825
-
Mitochondrial DNA and population size
-
Berry OF. 2006. Mitochondrial DNA and population size. Science 314:1388.
-
(2006)
Science
, vol.314
, pp. 1388
-
-
Berry, O.F.1
-
13
-
-
0019837699
-
Sequence and gene organization of mouse mitochondrial DNA
-
Bibb MJ, Van Etten RA, Wright CT, Walberg MW, Clayton DA. 1981. Sequence and gene organization of mouse mitochondrial DNA. Cell 26:167-180. (Pubitemid 12244496)
-
(1981)
Cell
, vol.26
, Issue.2
, pp. 167-180
-
-
Bibb, M.J.1
Van Etten, R.A.2
Wright, C.T.3
-
14
-
-
0033362107
-
DNA repair '99: Repair of mtDNA in Vertebrates
-
Bogenhagen DF. 1999. DNA repair '99: repair of mtDNA in Vertebrates. Am J Hum Genet. 64:1276-1281.
-
(1999)
Am J Hum Genet.
, vol.64
, pp. 1276-1281
-
-
Bogenhagen, D.F.1
-
15
-
-
0016327931
-
The number of mitochondrial DNA genomes in mouse L- and human HeLa cells: Quantitative isolation of mitochondrial DNA
-
Bogenhagen DF, Clayton DA. 1974. The number of mitochondrial DNA genomes in mouse L- and human HeLa cells: quantitative isolation of mitochondrial DNA. J Biol Chem. 249:7991-7995.
-
(1974)
J Biol Chem.
, vol.249
, pp. 7991-7995
-
-
Bogenhagen, D.F.1
Clayton, D.A.2
-
17
-
-
0025941139
-
The selection-mutation-drift theory of synonymous codon usage
-
Bulmer M. 1991. The selection-mutation-drift theory of synonymous codon usage. Genetics 129:897-907.
-
(1991)
Genetics
, vol.129
, pp. 897-907
-
-
Bulmer, M.1
-
18
-
-
0016685514
-
Studies of mouse mitochondrial DNA in Escherichia coli: Structure and function of the eucaryotic-procaryotic chimeric plasmids
-
Chang AC, Lansman RA, Clayton DA, Cohen SN. 1975. Studies of mouse mitochondrial DNA in Escherichia coli: structure and function of the eucaryotic-procaryotic chimeric plasmids. Cell 6(2):231-244.
-
(1975)
Cell
, vol.6
, Issue.2
, pp. 231-244
-
-
Chang, A.C.1
Lansman, R.A.2
Clayton, D.A.3
Cohen, S.N.4
-
20
-
-
85008270713
-
Cytochemical studies on chloroplasts. I. Cytologic demonstration of nucleic acids in chloroplasts
-
Chiba Y. 1951. Cytochemical studies on chloroplasts. I. Cytologic demonstration of nucleic acids in chloroplasts. Cytologia 16:259-264.
-
(1951)
Cytologia
, vol.16
, pp. 259-264
-
-
Chiba, Y.1
-
21
-
-
0014170028
-
Circular dimer and catenate forms of mitochondrial DNA in human leukaemic leucocytes
-
Clayton DA, Vinograd J. 1967. Circular dimer and catenate forms of mitochondrial DNA in human leukaemic leucocytes. Nature. 216:652-657.
-
(1967)
Nature
, vol.216
, pp. 652-657
-
-
Clayton, D.A.1
Vinograd, J.2
-
22
-
-
65649092976
-
Biopython: Freely available Python tools for computational molecular biology and bioinformatics
-
Cock PJ, et al. 2009. Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics 25(11):1422-1423.
-
(2009)
Bioinformatics
, vol.25
, Issue.11
, pp. 1422-1423
-
-
Cock, P.J.1
-
23
-
-
43349102636
-
The adaptive evolution of the mammalian mitochondrial genome
-
da Fonseca RR, Johnson WE, O'Brien SJ, Ramos MJ, Antunes A. 2008. The adaptive evolution of the mammalian mitochondrial genome. BMC Genomics. 4(9):119.
-
(2008)
BMC Genomics.
, vol.4
, Issue.9
, pp. 119
-
-
Da Fonseca, R.R.1
Johnson, W.E.2
O'Brien, S.J.3
Ramos, M.J.4
Antunes, A.5
-
24
-
-
33748947179
-
The role of mitochondrial respiration in physiological and evolutionary adaptation
-
DOI 10.1002/bies.20463
-
Das J. 2006. The role of mitochondrial respiration in physiological and evolutionary adaptation. Bioessays 28:890-901. (Pubitemid 44433752)
-
(2006)
BioEssays
, vol.28
, Issue.9
, pp. 890-901
-
-
Das, J.1
-
25
-
-
17844382664
-
Forces maintaining organellar genomes: Is any as strong as genetic code disparity or hydrophobicity?
-
DOI 10.1002/bies.20209
-
de Grey ADNJ. 2005. Forces maintaining organellar genomes: is any as strong as genetic code disparity or hydrophobicity? Bioessays 27(4):436-446. (Pubitemid 40592600)
-
(2005)
BioEssays
, vol.27
, Issue.4
, pp. 436-446
-
-
De Grey, A.D.N.J.1
-
26
-
-
47549097539
-
Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution
-
DOI 10.1016/j.cell.2008.05.042, PII S0092867408007058
-
Drummond DA, Wilke CO. 2008. Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution. Cell 134:341-352. (Pubitemid 352010328)
-
(2008)
Cell
, vol.134
, Issue.2
, pp. 341-352
-
-
Drummond, D.A.1
Wilke, C.O.2
-
27
-
-
33645456207
-
Eukaryotic evolution, changes and challenges
-
Embley TM, Martin W. 2006. Eukaryotic evolution, changes and challenges. Nature 440(7084):623-630.
-
(2006)
Nature
, vol.440
, Issue.7084
, pp. 623-630
-
-
Embley, T.M.1
Martin, W.2
-
28
-
-
0343057099
-
Yeast mitochondria: Subcellular units involved in the synthesis of respiratory enzymes in yeast
-
Ephrussi B, Slonimski PP. 1955. Yeast mitochondria: subcellular units involved in the synthesis of respiratory enzymes in yeast. Nature 176:1207-1208.
-
(1955)
Nature
, vol.176
, pp. 1207-1208
-
-
Ephrussi, B.1
Slonimski, P.P.2
-
29
-
-
0016110957
-
The evolutionary advantage of recombination
-
Felsenstein J. 1974. The evolutionary advantage of recombination. Genetics. 78:737-756.
-
(1974)
Genetics.
, vol.78
, pp. 737-756
-
-
Felsenstein, J.1
-
30
-
-
67650103911
-
Mitochondrial bio-energetics as a major motive force of speciation
-
Gershoni M, Templeton AR, Mishmar D. 2009. Mitochondrial bio-energetics as a major motive force of speciation. Bioessays 13:642-650.
-
(2009)
Bioessays
, vol.13
, pp. 642-650
-
-
Gershoni, M.1
Templeton, A.R.2
Mishmar, D.3
-
32
-
-
0033525788
-
Mitochondrial evolution
-
Gray MW, Burger G, Lang BF. 1999. Mitochondrial evolution. Science 283(5407):1476-1481.
-
(1999)
Science
, vol.283
, Issue.5407
, pp. 1476-1481
-
-
Gray, M.W.1
Burger, G.2
Lang, B.F.3
-
33
-
-
0015319592
-
A biologic clock: The mitochondria?
-
Harman D. 1972. A biologic clock: the mitochondria? J Am Geriatr Soc. 20(4):145-147.
-
(1972)
J Am Geriatr Soc.
, vol.20
, Issue.4
, pp. 145-147
-
-
Harman, D.1
-
34
-
-
79959503826
-
The international hapmap project
-
International HapMap Consortium
-
International HapMap Consortium. 2003. The International HapMap Project. Nature 426(6968):789-796.
-
(2003)
Nature
, vol.426
, Issue.6968
, pp. 789-796
-
-
-
35
-
-
0029816795
-
Random genetic drift in the female germline explains the rapid segregation of mammalian mitochondrial DNA
-
DOI 10.1038/ng1096-146
-
Jenuth JP, Peterson AC, Fu K, Shoubridge EA. 1996. Random genetic drift in the female germline explains the rapid segregation of mammalian mitochondrial DNA. Nat Genet. 14(2):146-151. (Pubitemid 26338793)
-
(1996)
Nature Genetics
, vol.14
, Issue.2
, pp. 146-151
-
-
Jenuth, J.P.1
Peterson, A.C.2
Fu, K.3
Shoubridge, E.A.4
-
36
-
-
38949118287
-
Codon usage in mitochondrial genomes: Distinguishing context-dependent mutation from translational selection
-
DOI 10.1093/molbev/msm259
-
Jia W, Higgs PG. 2008. Codon usage in mitochondrial genomes: distinguishing context-dependent mutation from translational selection. Mol Biol Evol. 25:339-351. (Pubitemid 351231605)
-
(2008)
Molecular Biology and Evolution
, vol.25
, Issue.2
, pp. 339-351
-
-
Jia, W.1
Higgs, P.G.2
-
37
-
-
7344244917
-
Mutation and selection at silent and replacement sites in the evolution of animal mitochondrial DNA
-
Kann LM, Rand DM. 1998. Mutation and selection at silent and replacement sites in the evolution of animal mitochondrial DNA. Genetica 102/103:393-407. (Pubitemid 28371732)
-
(1998)
Genetica
, vol.102-103
, pp. 393-407
-
-
Rand, D.M.1
Kann, L.M.2
-
38
-
-
0030750574
-
Expanding the functional human mitochon-drial DNA database by the establishment of primate xenomitochon-drial cybrids
-
Kenyon L, Moraes CT. 1997. Expanding the functional human mitochon-drial DNA database by the establishment of primate xenomitochon-drial cybrids. Proc Natl Acad Sci U S A. 94:91331-99135.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 91331-99135
-
-
Kenyon, L.1
Moraes, C.T.2
-
39
-
-
0033536195
-
Mitochondria and germ-cell death
-
Krakauer DC, Mira A. 1999. Mitochondria and germ-cell death. Nature 400(6740):125-126.
-
(1999)
Nature
, vol.400
, Issue.6740
, pp. 125-126
-
-
Krakauer, D.C.1
Mira, A.2
-
40
-
-
0013846325
-
Protein synthesis in mitochondria 3: On the effects of inhibitors on the incorporation of amino acids into protein by intact mitochondria and digitonin fractions
-
Kroon AM. 1965. Protein synthesis in mitochondria 3: on the effects of inhibitors on the incorporation of amino acids into protein by intact mitochondria and digitonin fractions. Biochim Biophys Acta. 108(2):275-284.
-
(1965)
Biochim Biophys Acta.
, vol.108
, Issue.2
, pp. 275-284
-
-
Kroon, A.M.1
-
41
-
-
84988044805
-
The energetics of genome complexity
-
Lane N, Martin W. 2010. The energetics of genome complexity. Nature 467(7318):929-934.
-
(2010)
Nature
, vol.467
, Issue.7318
, pp. 929-934
-
-
Lane, N.1
Martin, W.2
-
42
-
-
7344254101
-
Deleterious mutation accumulation in organelle genomes
-
Lynch M, Blanchard JL. 1998. Deleterious mutation accumulation in organelle genomes. Genetica 102-103(1-6):29-39. (Pubitemid 28371705)
-
(1998)
Genetica
, vol.102-103
, pp. 29-39
-
-
Lynch, M.1
Blanchard, J.L.2
-
43
-
-
76049111236
-
MitoZoa: A curated mitochondrial genome database of metazoans for comparative genomics studies
-
Lupi R, et al. 2010. MitoZoa: a curated mitochondrial genome database of metazoans for comparative genomics studies. Mitochondrion 10(2):192-199.
-
(2010)
Mitochondrion
, vol.10
, Issue.2
, pp. 192-199
-
-
Lupi, R.1
-
45
-
-
0036478952
-
Multiple neonatal deaths due to a homoplasmic mitochondrial DNA mutation
-
McFarland R, et al. 2002. Multiple neonatal deaths due to a homoplasmic mitochondrial DNA mutation. Nat Genet. 30(2):145-146.
-
(2002)
Nat Genet.
, vol.30
, Issue.2
, pp. 145-146
-
-
McFarland, R.1
-
46
-
-
0038420036
-
Functional respiratory chain analyses in murid xenomitochondrial cybrids expose coevolutionary constraints of cytochrome b and nuclear subunits of complex III
-
DOI 10.1093/molbev/msg132
-
McKenzie M, Chiotis M, Pinkert CA, Trounce IA. 2003. Functional respiratory chain analyses in murid xenomitochondrial cybrids expose coevolutionary constraints of cytochrome b and nuclear subunits of complex III. Mol Biol Evol. 20(7):1117-1124. (Pubitemid 36792827)
-
(2003)
Molecular Biology and Evolution
, vol.20
, Issue.7
, pp. 1117-1124
-
-
McKenzie, M.1
Chiotis, M.2
Pinkert, C.A.3
Trounce, I.A.4
-
47
-
-
34249062487
-
Positive and negative selection on the mitochondrial genome
-
DOI 10.1016/j.tig.2007.03.008, PII S0168952507001102
-
Meiklejohn CD, Montooth KL, Rand DM. 2007. Positive and negative selection on the mitochondrial genome. Trends Genet. 23: 259-263. (Pubitemid 46783841)
-
(2007)
Trends in Genetics
, vol.23
, Issue.6
, pp. 259-263
-
-
Meiklejohn, C.D.1
Montooth, K.L.2
Rand, D.M.3
-
48
-
-
78650025486
-
Mitochondrial-nuclear epistasis affects fitness within species but does not contribute to fixed incompatibilities between species of Drosophila
-
Montooth KL, Meiklejohn CD, Abt DN, Rand DM. 2010. Mitochondrial-nuclear epistasis affects fitness within species but does not contribute to fixed incompatibilities between species of Drosophila. Evolution 64(12):3364-3379.
-
(2010)
Evolution
, vol.64
, Issue.12
, pp. 3364-3379
-
-
Montooth, K.L.1
Meiklejohn, C.D.2
Abt, D.N.3
Rand, D.M.4
-
49
-
-
50549201557
-
The relation of recombination to mutational advance
-
Muller HJ. 1964. The relation of recombination to mutational advance. Mutat Res. 1:2-9.
-
(1964)
Mutat Res.
, vol.1
, pp. 2-9
-
-
Muller, H.J.1
-
50
-
-
34249083225
-
Comment on "population size does not influence mitochondrial genetic diversity in animals"
-
Mulligan CJ, Kitchen A, Miyamoto MM. 2006. Comment on "Population size does not influence mitochondrial genetic diversity in animals". Science 314:1390a.
-
(2006)
Science
, vol.314
-
-
Mulligan, C.J.1
Kitchen, A.2
Miyamoto, M.M.3
-
51
-
-
0003175810
-
Fibrous structures within the matrix of developing chick embryo mitochondria
-
Nass MM, Nass S. 1962. Fibrous structures within the matrix of developing chick embryo mitochondria. Exp Cell Res. 26:424-437.
-
(1962)
Exp Cell Res.
, vol.26
, pp. 424-437
-
-
Nass, M.M.1
Nass, S.2
-
52
-
-
64849093331
-
The causes of mutation accumulation in mitochondrial genomes
-
Neiman M, Taylor DR. 2009. The causes of mutation accumulation in mitochondrial genomes. Proc Biol Sci. 276:1201-1209.
-
(2009)
Proc Biol Sci.
, vol.276
, pp. 1201-1209
-
-
Neiman, M.1
Taylor, D.R.2
-
53
-
-
33144483078
-
Transitions to asexuality result in excess amino acid substitutions
-
DOI 10.1126/science.1118152
-
Paland S, Lynch M. 2006. Transitions to asexuality result in excess amino acid substitutions. Science 311:990-992. (Pubitemid 43271723)
-
(2006)
Science
, vol.311
, Issue.5763
, pp. 990-992
-
-
Paland, S.1
Lynch, M.2
-
54
-
-
0029049426
-
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
-
Perna NT, Kocher TD. 1995. Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. J Mol Evol. 41:353-358.
-
(1995)
J Mol Evol.
, vol.41
, pp. 353-358
-
-
Perna, N.T.1
Kocher, T.D.2
-
55
-
-
0033026606
-
Nucleotide substitution rate of mammalian mitochondrial genomes
-
Pesole G, Gissi C, De Chirico A, Saccone C. 1999. Nucleotide substitution rate of mammalian mitochondrial genomes. J Mol Evol. 48:427-434. (Pubitemid 29153362)
-
(1999)
Journal of Molecular Evolution
, vol.48
, Issue.4
, pp. 427-434
-
-
Pesole, G.1
Gissi, C.2
De Chirico, A.3
Saccone, C.4
-
56
-
-
8444235408
-
A broad survey of recombination in animal mitochondria
-
DOI 10.1093/molbev/msh244
-
Piganeau G, Gardner M, Eyre-Walker A. 2004. A broad survey of recombination in animal mitochondria. Mol Biol Evol. 21(12):2319-2325. (Pubitemid 39488902)
-
(2004)
Molecular Biology and Evolution
, vol.21
, Issue.12
, pp. 2319-2325
-
-
Piganeau, G.1
Gardner, M.2
Eyre-Walker, A.3
-
57
-
-
33846632221
-
Evaluating hypotheses for the origin of eukaryotes
-
DOI 10.1002/bies.20516
-
Poole AM, Penny D. 2006. Evaluating hypotheses for the origin of eukaryotes. Bioessays 29:74-84. (Pubitemid 46181806)
-
(2007)
BioEssays
, vol.29
, Issue.1
, pp. 74-84
-
-
Poole, A.M.1
Penny, D.2
-
58
-
-
34548082528
-
Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals
-
DOI 10.1073/pnas.0701256104
-
Popadin K, Polishchuk LV, Mamirova L, Knorre D, Gunbin K. 2007. Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals. Proc Natl Acad Sci U S A. 104(33):13390-13395. (Pubitemid 47293955)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.33
, pp. 13390-13395
-
-
Popadin, K.1
Polishchuk, L.V.2
Mamirova, L.3
Knorre, D.4
Gunbin, K.5
-
59
-
-
77957337688
-
Transmission of mitochondrial DNA diseases and ways to prevent them
-
Poulton J, et al. 2010. Transmission of mitochondrial DNA diseases and ways to prevent them. PLoS Genet. 6(8):e1001066.
-
(2010)
PLoS Genet.
, vol.6
, Issue.8
-
-
Poulton, J.1
-
60
-
-
79961135005
-
-
R Development Core Team R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0. [cited Jan 2011]
-
R Development Core Team. 2011. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0. [cited Jan 2011]. Available from: http://www.R-project. org[43988].
-
(2011)
R: A Language and Environment for Statistical Computing
-
-
-
61
-
-
8144226823
-
Cytonuclear coevolution: The genomics of cooperation
-
DOI 10.1016/j.tree.2004.10.003, PII S0169534704003052
-
Rand DM, Haney RA, Fry AJ. 2004. Cytonuclear coevolution: the genomics of cooperation. Trends Ecol Evol. 19(12):645-653. (Pubitemid 39471297)
-
(2004)
Trends in Ecology and Evolution
, vol.19
, Issue.12
, pp. 645-653
-
-
Rand, D.M.1
Haney, R.A.2
Fry, A.J.3
-
62
-
-
0030000951
-
Excess amino acid polymorphism in mitochondrial DNA: Contrasts among genes from Drosophila, mice, and humans
-
Rand DM, Kann LM. 1996. Excess amino acid polymorphism in mitochondrial DNA: contrasts among genes from Drosophila, mice, and humans. Mol Biol Evol. 13(6):735-748. (Pubitemid 26240078)
-
(1996)
Molecular Biology and Evolution
, vol.13
, Issue.6
, pp. 735-748
-
-
Rand, D.M.1
Kann, L.M.2
-
63
-
-
0036791993
-
Functional coadaptation between cytochrome c and cytochrome c oxidase within allopatric populations of a marine copepod
-
Rawson PD, Burton RS. 2002. Functional coadaptation between cytochrome c and cytochrome c oxidase within allopatric populations of a marine copepod. Proc Natl Acad Sci U S A. 99: 12955-12958.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 12955-12958
-
-
Rawson, P.D.1
Burton, R.S.2
-
65
-
-
0031950474
-
Asymmetrical directional mutation pressure in the mitochondrial genome of mammals
-
Reyes A, Gissi C, Pesole G, Saccone C. 1998. Asymmetrical directional mutation pressure in the mitochondrial genome of mammals. Mol Biol Evol. 15:957-966. (Pubitemid 28364449)
-
(1998)
Molecular Biology and Evolution
, vol.15
, Issue.8
, pp. 957-966
-
-
Reyes, A.1
Gissi, C.2
Pesole, G.3
Saccone, C.4
-
66
-
-
0347356538
-
Effects of Purifying and Adaptive Selection on Regional Variation in Human mtDNA
-
DOI 10.1126/science.1088434
-
Ruiz-Pesini E, Mishmar D, Brandon M, Procaccio V, Wallace DC. 2004. Effects of purifying and adaptive selection on regional variation in human mtDNA. Science 303(5655):223-226. (Pubitemid 38057570)
-
(2004)
Science
, vol.303
, Issue.5655
, pp. 223-226
-
-
Ruiz-Pesini, E.1
Mishmar, D.2
Brandon, M.3
Procaccio, V.4
Wallace, D.C.5
-
67
-
-
0032860013
-
Evolutionary genomics in Metazoa: The mitochondrial DNA as a model system
-
DOI 10.1016/S0378-1119(99)00270-X, PII S037811199900270X
-
Saccone C, De Giorgi C, Gissi C, Pesole G, Reyes A. 1999. Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system. Gene 238:195-209. (Pubitemid 29436109)
-
(1999)
Gene
, vol.238
, Issue.1
, pp. 195-209
-
-
Saccone, C.1
De Giorgi, C.2
Gissi, C.3
Pesole, G.4
Reyes, A.5
-
68
-
-
0013857151
-
Effect of atractyloside on the incorporation of labeled nucleotides into the ribonucleic acids of the nuclei and mitochondria of rat liver
-
Saccone C, Romano B, Di Bitonto G, Barnabei O, Quagliariello E. 1965. Effect of atractyloside on the incorporation of labeled nucleotides into the ribonucleic acids of the nuclei and mitochondria of rat liver. Boll Soc Ital Biol Sper. 41(20): 1203-1205.
-
(1965)
Boll Soc Ital Biol Sper.
, vol.41
, Issue.20
, pp. 1203-1205
-
-
Saccone, C.1
Romano, B.2
Di Bitonto, G.3
Barnabei, O.4
Quagliariello, E.5
-
69
-
-
0242416051
-
Cytonuclear coadaptation in Drosophila: Disruption of cytochrome c oxidase activity in backcross genotypes
-
Sackton TB, Haney RA, Rand DM. 2003. Cytonuclear coadaptation in Drosophila: disruption of cytochrome c oxidase activity in backcross genotypes. Evolution 57(10):2315-2325. (Pubitemid 37388023)
-
(2003)
Evolution
, vol.57
, Issue.10
, pp. 2315-2325
-
-
Sackton, T.B.1
Haney, R.A.2
Rand, D.M.3
-
70
-
-
42049114034
-
Transcriptional paradigms in mammalian mitochondrial biogenesis and function
-
DOI 10.1152/physrev.00025.2007
-
Scarpulla RC. 2008. Transcriptional paradigms in mammalian mitochon-drial biogenesis and function. Physiol Rev. 88(2):611-638. (Pubitemid 351520089)
-
(2008)
Physiological Reviews
, vol.88
, Issue.2
, pp. 611-638
-
-
Scarpulla, R.C.1
-
71
-
-
0035056971
-
Evolution of nuclear- and mitochondrial-encoded subunit interaction in cytochrome c oxidase
-
Schmidt TR, Wu W, Goodman M, Grossman LI. 2001. Evolution of nuclear- and mitochondrial-encoded subunit interaction in cyto-chrome c oxidase. Mol Biol Evol. 18(4):563-569. (Pubitemid 32268009)
-
(2001)
Molecular Biology and Evolution
, vol.18
, Issue.4
, pp. 563-569
-
-
Schmidt, T.R.1
Wu, W.2
Goodman, M.3
Grossman, L.I.4
-
72
-
-
38949091096
-
Strong purifying selection in transmission of mammalian mitochondrial DNA
-
Stewart JB, Freyer C, Elson JL, Larsson NG. 2008. Strong purifying selection in transmission of mammalian mitochondrial DNA. PLoS Biol. 6(1):e10.
-
(2008)
PLoS Biol.
, vol.6
, Issue.1
-
-
Stewart, J.B.1
Freyer, C.2
Elson, J.L.3
Larsson, N.G.4
-
73
-
-
29144458899
-
Somatic mtDNA mutations cause aging phenotypes without affecting reactive oxygen species production
-
DOI 10.1073/pnas.0508886102
-
Trifunovic A, et al. 2005. Somatic mtDNA mutations cause aging phenotypes without affecting reactive oxygen species production. Proc Natl Acad Sci U S A. 102(50):17993-17998. (Pubitemid 41798490)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.50
, pp. 17993-17998
-
-
Trifunovic, A.1
Hansson, A.2
Wredenberg, A.3
Rovio, A.T.4
Dufour, E.5
Khvorostov, I.6
Spelbrink, J.N.7
Wibom, R.8
Jacobs, H.T.9
Larsson, N.-G.10
-
74
-
-
0022532186
-
Why mitochondria need a genome
-
DOI 10.1016/0014-5793(86)81172-3
-
Von Heijne G. 1986. Why mitochondria need a genome. FEBS Lett. 198:1-4. (Pubitemid 16055161)
-
(1986)
FEBS Letters
, vol.198
, Issue.1
, pp. 1-4
-
-
Von Heijne, G.1
-
75
-
-
23844558266
-
A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: A dawn for evolutionary medicine
-
DOI 10.1146/annurev.genet.39.110304.095751
-
Wallace DC. 2005. A mitochondrial paradigm of metabolic and degenerative diseases, ageing, and cancer: a dawn for evolutionary medicine. Annu Rev Genet. 39:359-407. (Pubitemid 43011120)
-
(2005)
Annual Review of Genetics
, vol.39
, pp. 359-407
-
-
Wallace, D.C.1
-
76
-
-
56549131066
-
Revealing the hidden complexities of mtDNA inheritance
-
Erratum in: Mol Ecol 2009 Feb;18(4) 762
-
White DJ, Wolff JN, Pierson M, Gemmell NJ. 2008. Revealing the hidden complexities of mtDNA inheritance. Mol Ecol. 17(23):4925-4942 Erratum in: Mol Ecol 2009 Feb;18(4):762.
-
(2008)
Mol Ecol.
, vol.17
, Issue.23
, pp. 4925-4942
-
-
White, D.J.1
Wolff, J.N.2
Pierson, M.3
Gemmell, N.J.4
-
77
-
-
0025318864
-
The 'effective number of codons' used in a gene
-
DOI 10.1016/0378-1119(90)90491-9
-
Wright F. 1990. The "effective number of codons" used in a gene. Gene 87:23-29. (Pubitemid 20139850)
-
(1990)
Gene
, vol.87
, Issue.1
, pp. 23-29
-
-
Wright, F.1
-
78
-
-
34547803197
-
PAML 4: Phylogenetic analysis by maximum likelihood
-
DOI 10.1093/molbev/msm088
-
Yang Z. 2007. PAML 4: a program package for phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24:1586-1591. (Pubitemid 47236688)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1586-1591
-
-
Yang, Z.1
-
79
-
-
77950862565
-
Is the mitochondrial cloud the selection machinery for preferentially transmitting wild-type mtDNA between generations? Rewinding Mü ller's ratchet efficiently
-
Zhou RR, Wang B, Wang J, Schatten H, Zhang YZ. 2010. Is the mitochondrial cloud the selection machinery for preferentially transmitting wild-type mtDNA between generations? Rewinding Mü ller's ratchet efficiently. Curr Genet. 56(2):101-107.
-
(2010)
Curr Genet.
, vol.56
, Issue.2
, pp. 101-107
-
-
Zhou, R.R.1
Wang, B.2
Wang, J.3
Schatten, H.4
Zhang, Y.Z.5
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