메뉴 건너뛰기




Volumn 29, Issue 2, 2012, Pages 161-172

Seasonal Changes In Mineralogy, Geochemistry and Microbial Community of Bacteriogenic Iron Oxides (BIOS) Deposited in a Circumneutral Wetland

Author keywords

Bacteriogenic iron oxides; circumneutral iron oxidation; iron reduction; microbial diversity; seasonal

Indexed keywords

FERRIHYDRITE; GEOCHEMISTRY; GOETHITE; IRON OXIDE; MICROBIAL COMMUNITY; MINERALOGY; ORGANIC CARBON; POREWATER; PROKARYOTE; RNA; WETLAND; X-RAY DIFFRACTION;

EID: 84858039331     PISSN: 01490451     EISSN: 15210529     Source Type: Journal    
DOI: 10.1080/01490451.2010.532196     Document Type: Article
Times cited : (21)

References (54)
  • 1
    • 33645461506 scopus 로고    scopus 로고
    • In situ ecological development of a bacteriogenic iron oxide-producing microbial community from a subsurface granitic rock environment
    • Anderson, C R, James, R E, Fru, E C, Kennedy, C B and Pedersen, K. 2006. In situ ecological development of a bacteriogenic iron oxide-producing microbial community from a subsurface granitic rock environment. Geology, 4: 29-42.
    • (2006) Geology , vol.4 , pp. 29-42
    • Anderson, C.R.1    James, R.E.2    Fru, E.C.3    Kennedy, C.B.4    Pedersen, K.5
  • 2
    • 0003826420 scopus 로고    scopus 로고
    • EXCURV98. CCLRC Daresbury Laboratory computer program
    • Available from
    • Binsted, N. 1998. "EXCURV98. CCLRC Daresbury Laboratory computer program". Available from:www.cse.scitech.ac.uk/cmg/EXCURV
    • (1998)
    • Binsted, N.1
  • 3
    • 58149375678 scopus 로고    scopus 로고
    • Microbial iron redox cycling in a circumneutral-pH groundwater seep
    • Blöthe, M and Roden, E E. 2009. Microbial iron redox cycling in a circumneutral-pH groundwater seep. Appl Environ Microbiol, 75: 468-473.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 468-473
    • Blöthe, M.1    Roden, E.E.2
  • 4
    • 84988168814 scopus 로고
    • Interstitial water sampling by dialysis - Methodological notes
    • Carignan, R. 1984. Interstitial water sampling by dialysis - Methodological notes. Limnol Oceanogr, 29: 667-670.
    • (1984) Limnol Oceanogr , vol.29 , pp. 667-670
    • Carignan, R.1
  • 5
    • 84944816274 scopus 로고
    • Spectrophotometric determination of hydrogen sulfide in natural waters
    • Cline, JD. 1969. Spectrophotometric determination of hydrogen sulfide in natural waters. Limnol Oceanogr, 14: 454-458.
    • (1969) Limnol Oceanogr , vol.14 , pp. 454-458
    • Cline, J.D.1
  • 6
    • 0020646641 scopus 로고
    • The kinetics of the oxidation of ferrous iron in synthetic and natural waters
    • Davison, W and Seed, G. 1983. The kinetics of the oxidation of ferrous iron in synthetic and natural waters. Geochim Cosmochim Acta, 47: 67-79.
    • (1983) Geochim Cosmochim Acta , vol.47 , pp. 67-79
    • Davison, W.1    Seed, G.2
  • 7
    • 46049119790 scopus 로고    scopus 로고
    • Low-oxygen and chemical kinetic constraints on the geochemical niche of neutrophilic iron(II) oxidizing microorganisms
    • Druschel, G K, Emerson, D, Sutka, R, Suchecki, P and Luther, G W. 2008. Low-oxygen and chemical kinetic constraints on the geochemical niche of neutrophilic iron(II) oxidizing microorganisms. Geochim Cosmochim Acta, 72: 3358-3370.
    • (2008) Geochim Cosmochim Acta , vol.72 , pp. 3358-3370
    • Druschel, G.K.1    Emerson, D.2    Sutka, R.3    Suchecki, P.4    Luther, G.W.5
  • 8
    • 60749134694 scopus 로고    scopus 로고
    • Biogeochemistry of iron oxidation in a circumneutral freshwater habitat
    • Duckworth, O W, Holmström, S JM, Peña, J and Sposito, G. 2009. Biogeochemistry of iron oxidation in a circumneutral freshwater habitat. Chem Geol, 260: 149-158.
    • (2009) Chem Geol , vol.260 , pp. 149-158
    • Duckworth, O.W.1    Holmström, S.J.M.2    Peña, J.3    Sposito, G.4
  • 9
    • 4644285309 scopus 로고    scopus 로고
    • Neutrophilic iron-oxidizing bacteria in the ocean: Their habitats, diversity, and roles in mineral deposition, rock alteration, and biomass production in the deep-sea
    • Edwards, K J, Bach, W, McCollom, T M and Rogers, D R. 2004. Neutrophilic iron-oxidizing bacteria in the ocean: Their habitats, diversity, and roles in mineral deposition, rock alteration, and biomass production in the deep-sea. Geomicrobiol J, 21: 393-404.
    • (2004) Geomicrobiol J , vol.21 , pp. 393-404
    • Edwards, K.J.1    Bach, W.2    McCollom, T.M.3    Rogers, D.R.4
  • 10
    • 0013208353 scopus 로고    scopus 로고
    • Isolation and characterization of novel psychrophilic, neutrophilic, Fe-oxidizing, chemolithoautotrophic α- and γ-Proteobacteria from the deep sea
    • Edwards, K J, Rogers, D R, Wirsen, C O and McCollom, T M. 2003. Isolation and characterization of novel psychrophilic, neutrophilic, Fe-oxidizing, chemolithoautotrophic α- and γ-Proteobacteria from the deep sea. Appl Environ Microbiol, 69: 2906-2913.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2906-2913
    • Edwards, K.J.1    Rogers, D.R.2    Wirsen, C.O.3    McCollom, T.M.4
  • 11
    • 78751597039 scopus 로고    scopus 로고
    • EXSPLINE-a program for EXAFS background subtraction
    • CCLRC Daresbury Laboratory computer program
    • Ellis, P. 2000. "EXSPLINE-a program for EXAFS background subtraction". CCLRC Daresbury Laboratory computer program.
    • (2000)
    • Ellis, P.1
  • 12
    • 0001803137 scopus 로고    scopus 로고
    • Microbial oxidation of Fe(II) and Mn(II) at circumneutral pH
    • In: Lovley D R, editors Washington, DC: ASM Press
    • Emerson, D. 2000. "Microbial oxidation of Fe(II) and Mn(II) at circumneutral pH". In Environmental Microbe- Mineral Interactions, Edited by: Lovley, D R. 53-78. Washington, DC: ASM Press.
    • (2000) Environmental Microbe- Mineral Interactions , pp. 53-78
    • Emerson, D.1
  • 13
    • 4644295752 scopus 로고    scopus 로고
    • Bacterial iron oxidation in circumneutral freshwater habitats: Findings from the field and the laboratory
    • Emerson, D and Weiss, J V. 2004. Bacterial iron oxidation in circumneutral freshwater habitats: Findings from the field and the laboratory. Geomicrobiol J, 21: 405-414.
    • (2004) Geomicrobiol J , vol.21 , pp. 405-414
    • Emerson, D.1    Weiss, J.V.2
  • 14
    • 0036275068 scopus 로고    scopus 로고
    • Neutrophilic Fe-Oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition
    • Emerson, D and Moyer, C L. 2002. Neutrophilic Fe-Oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition. Appl Environ Microbiol, 68: 3085-3093.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3085-3093
    • Emerson, D.1    Moyer, C.L.2
  • 15
    • 0030734782 scopus 로고    scopus 로고
    • Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH
    • Emerson, D and Moyer, C. 1997. Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH. Appl Environ Microbiol, 63: 4784-4792.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4784-4792
    • Emerson, D.1    Moyer, C.2
  • 16
    • 0028172025 scopus 로고
    • Investigation of an iron-oxidizing microbial mat community located near Aarhus, Denmark - Field studies
    • Emerson, D and Revsbech, N P. 1994a. Investigation of an iron-oxidizing microbial mat community located near Aarhus, Denmark - Field studies. Appl Environ Microbiol, 60: 4022-4031.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 4022-4031
    • Emerson, D.1    Revsbech, N.P.2
  • 17
    • 0028073818 scopus 로고
    • Investigation of an iron-oxidizing microbial mat community located near Aarhus, Denmark - Laboratory studies
    • Emerson, D and Revsbech, N P. 1994b. Investigation of an iron-oxidizing microbial mat community located near Aarhus, Denmark - Laboratory studies. Appl Environ Microbiol, 60: 4032-4038.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 4032-4038
    • Emerson, D.1    Revsbech, N.P.2
  • 18
    • 77957937698 scopus 로고    scopus 로고
    • Iron-oxidizing bacteria: An envrionmental and genomic perspective
    • Emerson, D, Fleming, E J and McBeth, J M. 2010. Iron-oxidizing bacteria: An envrionmental and genomic perspective. Annu Rev Microbiol, 64: 561-583.
    • (2010) Annu Rev Microbiol , vol.64 , pp. 561-583
    • Emerson, D.1    Fleming, E.J.2    McBeth, J.M.3
  • 19
    • 0033014447 scopus 로고    scopus 로고
    • Iron-oxidizing bacteria are associated with ferric hydroxide precipitates (Fe-plaque) on the roots of wetland plants
    • Emerson, D, Weiss, J V and Megonigal, J P. 1999. Iron-oxidizing bacteria are associated with ferric hydroxide precipitates (Fe-plaque) on the roots of wetland plants. Appl Environ Microbiol, 65: 2758-2761.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2758-2761
    • Emerson, D.1    Weiss, J.V.2    Megonigal, J.P.3
  • 21
    • 0034113592 scopus 로고    scopus 로고
    • Retention of strontium, cesium, lead and uranium by bacterial iron oxides from a subterranean environment
    • Ferris, F G, Hallberg, R O, Lyven, B and Pedersen, K. 2000. Retention of strontium, cesium, lead and uranium by bacterial iron oxides from a subterranean environment. Appl Geochem, 15: 1035-1042.
    • (2000) Appl Geochem , vol.15 , pp. 1035-1042
    • Ferris, F.G.1    Hallberg, R.O.2    Lyven, B.3    Pedersen, K.4
  • 22
    • 0032827727 scopus 로고    scopus 로고
    • Accumulation of metals by bacteriogenic iron oxides in a subterranean environment
    • Ferris, F G, Konhauser, K O, Lyven, B and Pedersen, K. 1999. Accumulation of metals by bacteriogenic iron oxides in a subterranean environment. Geomicrobiol J, 16: 181-192.
    • (1999) Geomicrobiol J , vol.16 , pp. 181-192
    • Ferris, F.G.1    Konhauser, K.O.2    Lyven, B.3    Pedersen, K.4
  • 23
    • 70349843303 scopus 로고    scopus 로고
    • Iron oxides influence bacterial community structure and the spatial distribution of the aerobic methanotrophs and sulphate reducers in granitic aquifers
    • Fru, EC. 2009. Iron oxides influence bacterial community structure and the spatial distribution of the aerobic methanotrophs and sulphate reducers in granitic aquifers. Geomicrobiol J, 26: 415-429.
    • (2009) Geomicrobiol J , vol.26 , pp. 415-429
    • Fru, E.C.1
  • 25
    • 39849103505 scopus 로고    scopus 로고
    • Gallionella Ehrenberg 1838, 166AL
    • In: Brenner D J, Krieg N R, Staley J T, editors New York: Springer
    • Hallbeck, L and Pedersen, K. 2005. "Gallionella Ehrenberg 1838, 166AL". In Bergey's Manual of Systematic Bacteriology, Edited by: Brenner, D J, Krieg, N R and Staley, J T. 880-886. New York: Springer.
    • (2005) Bergey's Manual of Systematic Bacteriology , pp. 880-886
    • Hallbeck, L.1    Pedersen, K.2
  • 26
    • 0026052098 scopus 로고
    • Autotrophic and mixotrophic growth of Gallionella ferruginea
    • Hallbeck, L and Pedersen, K. 1991. Autotrophic and mixotrophic growth of Gallionella ferruginea. J Gen Microbiol, 137: 2657-2661.
    • (1991) J Gen Microbiol , vol.137 , pp. 2657-2661
    • Hallbeck, L.1    Pedersen, K.2
  • 27
    • 53949123535 scopus 로고    scopus 로고
    • Physiology of phototrophic iron(II)-oxidizing bacteria: Implications for modern and ancient environments
    • Hegler, F, Posth, N R, Jiang, J and Kappler, A. 2008. Physiology of phototrophic iron(II)-oxidizing bacteria: implications for modern and ancient environments. FEMS Microbiol Ecol, 66: 250-260.
    • (2008) FEMS Microbiol Ecol , vol.66 , pp. 250-260
    • Hegler, F.1    Posth, N.R.2    Jiang, J.3    Kappler, A.4
  • 29
    • 8844246441 scopus 로고    scopus 로고
    • Evidence for microbial-mediated iron oxidation at a neutrophilic groundwater spring
    • James, R E and Ferris, F G. 2004. Evidence for microbial-mediated iron oxidation at a neutrophilic groundwater spring. Chem Geol, 212: 301-311.
    • (2004) Chem Geol , vol.212 , pp. 301-311
    • James, R.E.1    Ferris, F.G.2
  • 30
    • 33751219862 scopus 로고    scopus 로고
    • Carbonate effects and pH-dependence of uranium sorption onto bacteriogenic iron oxides: Kinetic and equilibrium studies
    • Katsoyiannis, IA. 2007. Carbonate effects and pH-dependence of uranium sorption onto bacteriogenic iron oxides: Kinetic and equilibrium studies. J Hazard Mater, 139: 31-37.
    • (2007) J Hazard Mater , vol.139 , pp. 31-37
    • Katsoyiannis, I.A.1
  • 31
    • 8844267671 scopus 로고    scopus 로고
    • Hydrothermal phase stabilization of 2-line ferrihydrite by bacteria
    • Kennedy, C B, Scott, S D and Ferris, F G. 2004. Hydrothermal phase stabilization of 2-line ferrihydrite by bacteria. Chem Geol, 212: 269-277.
    • (2004) Chem Geol , vol.212 , pp. 269-277
    • Kennedy, C.B.1    Scott, S.D.2    Ferris, F.G.3
  • 32
    • 0042575641 scopus 로고    scopus 로고
    • Characterization of bacteriogenic iron oxide deposits from Axial Volcano, Juan de Fuca Ridge, northeast Pacific Ocean
    • Kennedy, C B, Scott, S D and Ferris, F G. 2003. Characterization of bacteriogenic iron oxide deposits from Axial Volcano, Juan de Fuca Ridge, northeast Pacific Ocean. Geomicrobiol J, 20: 199-214.
    • (2003) Geomicrobiol J , vol.20 , pp. 199-214
    • Kennedy, C.B.1    Scott, S.D.2    Ferris, F.G.3
  • 34
    • 33846655127 scopus 로고    scopus 로고
    • Seasonal variations in pore water and sediment geochemistry of littoral lake sediments (Asylum Lake, MI, USA)
    • Koretsky, C M, Haas, J R, Miller, D and Ndenga, N T. 2006a. Seasonal variations in pore water and sediment geochemistry of littoral lake sediments (Asylum Lake, MI, USA). Geochem Trans, 7: 11
    • (2006) Geochem Trans , vol.7 , pp. 11
    • Koretsky, C.M.1    Haas, J.R.2    Miller, D.3    Ndenga, N.T.4
  • 35
    • 33846665098 scopus 로고    scopus 로고
    • Seasonal variations in vertical redox stratification and potential influence on trace metal speciation in minerotrophic peat sediments
    • Koretsky, C M, Haas, J R, Ndenga, N T and Miller, D. 2006b. Seasonal variations in vertical redox stratification and potential influence on trace metal speciation in minerotrophic peat sediments. Water Air Soil Pollut, 173: 373-403.
    • (2006) Water Air Soil Pollut , vol.173 , pp. 373-403
    • Koretsky, C.M.1    Haas, J.R.2    Ndenga, N.T.3    Miller, D.4
  • 37
    • 24644486519 scopus 로고    scopus 로고
    • Sorption of cadmium and lead by bacteria-ferrihydrite composites
    • Kulczycki, E, Fowle, D A, Fortin, D and Ferris, F G. 2005. Sorption of cadmium and lead by bacteria-ferrihydrite composites. Geomicrobiol J, 22: 299-310.
    • (2005) Geomicrobiol J , vol.22 , pp. 299-310
    • Kulczycki, E.1    Fowle, D.A.2    Fortin, D.3    Ferris, F.G.4
  • 38
    • 60049093204 scopus 로고    scopus 로고
    • Preliminary characterization and biological reduction of putative biogenic iron oxides (BIOS) from the Tonga-Kermadec Arc, southwest Pacific Ocean
    • Langley, S, Igric, P, Takahashi, Y, Sakai, Y, Fortin, D, Hannington, M and Schwarz-Schampera, U. 2009a. Preliminary characterization and biological reduction of putative biogenic iron oxides (BIOS) from the Tonga-Kermadec Arc, southwest Pacific Ocean. Geobiology, 7: 35-49.
    • (2009) Geobiology , vol.7 , pp. 35-49
    • Langley, S.1    Igric, P.2    Takahashi, Y.3    Sakai, Y.4    Fortin, D.5    Hannington, M.6    Schwarz-Schampera, U.7
  • 41
    • 84858010231 scopus 로고    scopus 로고
    • Cu(II) Sorption to Bacillus subtilis and Bacteriogenic Ferrihydrite: Insights from XAS Spectroscopy
    • Moon, E M and Peacock, C L. 2009. Cu(II) Sorption to Bacillus subtilis and Bacteriogenic Ferrihydrite: Insights from XAS Spectroscopy. 73: A898-A898.
    • (2009) , vol.73
    • Moon, E.M.1    Peacock, C.L.2
  • 42
    • 0141619958 scopus 로고    scopus 로고
    • Large-scale patterns in dissolved organic carbon concentration, flux, and sources
    • In: Findlay S, Sinsabaugh R, editors New York: Elsevier
    • Mulholland, PJ. 2003. "Large-scale patterns in dissolved organic carbon concentration, flux, and sources". In Aquatic Ecosystems: Interactivity of Dissolved Organic Matter, Edited by: Findlay, S and Sinsabaugh, R. 139-159. New York: Elsevier.
    • (2003) Aquatic Ecosystems: Interactivity of Dissolved Organic Matter , pp. 139-159
    • Mulholland, P.J.1
  • 43
    • 33847387109 scopus 로고    scopus 로고
    • Returning to their roots: Iron-oxidizing bacteria enhance short-term plaque formation in the wetland-plant rhizosphere
    • Neubauer, S C, Toledo-Duran, G E, Emerson, D and Megonigal, J P. 2007. Returning to their roots: Iron-oxidizing bacteria enhance short-term plaque formation in the wetland-plant rhizosphere. Geomicrobiol J, 24: 65-73.
    • (2007) Geomicrobiol J , vol.24 , pp. 65-73
    • Neubauer, S.C.1    Toledo-Duran, G.E.2    Emerson, D.3    Megonigal, J.P.4
  • 45
    • 12944266737 scopus 로고    scopus 로고
    • Long-term in vitro transformation of 2-line ferrihydrite to goethite/hematite at 4, 10, 15 and 25°C
    • Schwertmann, U, Stanjek, H and Becher, H-. 2004. Long-term in vitro transformation of 2-line ferrihydrite to goethite/hematite at 4, 10, 15 and 25°C. Clay Miner, 39: 433-438.
    • (2004) Clay Miner , vol.39 , pp. 433-438
    • Schwertmann, U.1    Stanjek, H.2    Becher, H.3
  • 46
    • 34848838153 scopus 로고    scopus 로고
    • The Genera Leptothrix and Sphaerotilus
    • In: Dworkin M, Falkow S, Rosenberg E, Schleifer K, Stackebrandt E, editors New York: Springer
    • Spring, S. 2006. "The Genera Leptothrix and Sphaerotilus". In The Prokaryotes, 3rd, Edited by: Dworkin, M, Falkow, S, Rosenberg, E, Schleifer, K and Stackebrandt, E. 758-777. New York: Springer.
    • (2006) The Prokaryotes , pp. 758-777
    • Spring, S.1
  • 47
    • 84856217194 scopus 로고    scopus 로고
    • Genus Incertae Sedis XIII. Leptothrix Kutzing 1843, 184AL
    • In: Brenner D J, Krieg N R, Staley J T, editors New York: Springer
    • Spring, S and Kämpfer, P. 2005. "Genus Incertae Sedis XIII. Leptothrix Kutzing 1843, 184AL". In Bergey's Manual of Systematic Bacteriology, Edited by: Brenner, D J, Krieg, N R and Staley, J T. 740-746. New York: Springer.
    • (2005) Bergey's Manual of Systematic Bacteriology , pp. 740-746
    • Spring, S.1    Kämpfer, P.2
  • 49
    • 33847670407 scopus 로고
    • Ferrozine-a new spectrophotometric reagent for iron
    • Stookey, LL. 1970. Ferrozine-a new spectrophotometric reagent for iron. Anal Chem, 42: 779-781.
    • (1970) Anal Chem , vol.42 , pp. 779-781
    • Stookey, L.L.1
  • 51
    • 46249115384 scopus 로고    scopus 로고
    • Laminated iron texture by iron-oxidizing bacteria in a calcite travertine
    • Takashima, C, Kano, A, Naganuma, T and Tazaki, K. 2008. Laminated iron texture by iron-oxidizing bacteria in a calcite travertine. Geomicrobiol J, 25: 193-202.
    • (2008) Geomicrobiol J , vol.25 , pp. 193-202
    • Takashima, C.1    Kano, A.2    Naganuma, T.3    Tazaki, K.4
  • 53
    • 67549134811 scopus 로고    scopus 로고
    • Diversity of iron oxidizers in wetland soils revealed by novel 16S rRNA primers targeting Gallionella-related bacteria
    • Wang, J, Muyzer, G, Bodelier, P LE and Laanbroek, H J. 2009. Diversity of iron oxidizers in wetland soils revealed by novel 16S rRNA primers targeting Gallionella-related bacteria. ISME J, 3: 715-725.
    • (2009) ISME J , vol.3 , pp. 715-725
    • Wang, J.1    Muyzer, G.2    Bodelier, P.L.E.3    Laanbroek, H.J.4
  • 54
    • 36849013617 scopus 로고    scopus 로고
    • Characterization of neutrophilic Fe(II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov sp nov., and Sideroxydans paludicola sp nov
    • Weiss, J V, Rentz, J A, Plaia, T, Neubauer, S C, Merrill-Floyd, M, Lilburn, T, Bradburne, C, Megonigal, J P and Emerson, D. 2007. Characterization of neutrophilic Fe(II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov sp nov., and Sideroxydans paludicola sp nov. Geomicrobiol J, 24: 559-570.
    • (2007) Geomicrobiol J , vol.24 , pp. 559-570
    • Weiss, J.V.1    Rentz, J.A.2    Plaia, T.3    Neubauer, S.C.4    Merrill-Floyd, M.5    Lilburn, T.6    Bradburne, C.7    Megonigal, J.P.8    Emerson, D.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.