메뉴 건너뛰기




Volumn 91, Issue 2, 2012, Pages 103-110

Systematic use of universal 16S rRNA gene polymerase chain reaction (PCR) and sequencing for processing pleural effusions improves conventional culture techniques

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84857881653     PISSN: 00257974     EISSN: 15365964     Source Type: Journal    
DOI: 10.1097/MD.0b013e31824dfdb0     Document Type: Article
Times cited : (39)

References (41)
  • 1
    • 0027465180 scopus 로고
    • Empyema of the thorax in adults: Etiology, microbiologic findings, and management
    • Alfageme I, Munoz F, Pena N, Umbria S. Empyema of the thorax in adults. Etiology, microbiologic findings, and management. Chest. 1993;103:839-843. (Pubitemid 23086185)
    • (1993) Chest , vol.103 , Issue.3 , pp. 839-843
    • Alfageme, I.1    Munoz, F.2    Pena, N.3    Umbria, S.4
  • 2
    • 65549169558 scopus 로고    scopus 로고
    • The expansion of the microbiological spectrum of brain abscesses with use of multiple 16S ribosomal DNA sequencing
    • Al Masalma M, Armougom F, Scheld WM, Dufour H, Roche PH, Drancourt M, Raoult D. The expansion of the microbiological spectrum of brain abscesses with use of multiple 16S ribosomal DNA sequencing. Clin Infect Dis. 2009;48:1169-1178.
    • (2009) Clin Infect Dis. , vol.48 , pp. 1169-1178
    • Al Masalma, M.1    Armougom, F.2    Scheld, W.M.3    Dufour, H.4    Roche, P.H.5    Drancourt, M.6    Raoult, D.7
  • 3
    • 15844376338 scopus 로고    scopus 로고
    • Low yield of microbiologic studies on pleural fluid specimens
    • DOI 10.1378/chest.127.3.916
    • Barnes TW, Olson EJ, Morgenthaler TI, Edson RS, Decker PA, Ryu JH. Low yield of microbiologic studies on pleural fluid specimens. Chest. 2005;127:916-921. (Pubitemid 40775524)
    • (2005) Chest , vol.127 , Issue.3 , pp. 916-921
    • Barnes, T.W.1    Olson, E.J.2    Morgenthaler, T.I.3    Edson, R.S.4    Decker, P.A.5    Ryu, J.H.6
  • 7
    • 0033775331 scopus 로고    scopus 로고
    • 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates
    • Drancourt M, Bollet C, Carlioz A, Martelin R, Gayral JP, Raoult D. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol. 2000;38:3623-3630.
    • (2000) J Clin Microbiol. , vol.38 , pp. 3623-3630
    • Drancourt, M.1    Bollet, C.2    Carlioz, A.3    Martelin, R.4    Gayral, J.P.5    Raoult, D.6
  • 8
    • 0032997937 scopus 로고    scopus 로고
    • Pleural space infections: Microbiology and antimicrobial therapy
    • Everts RJ, Reller LB. Pleural space infections: microbiology and antimicrobial therapy. Semin Respir Infect. 1999;14:18-30. (Pubitemid 29141075)
    • (1999) Seminars in Respiratory Infections , vol.14 , Issue.1 , pp. 18-30
    • Everts, R.J.1    Relier, L.B.2
  • 9
    • 0036930960 scopus 로고    scopus 로고
    • Evaluation of the polymerase chain reaction method for detection of Streptococcus pneumoniae DNA in pleural fluid samples
    • DOI 10.1378/chest.122.6.2212
    • Falguera M, Lopez A, Nogues A, Porcel JM, Rubio-Caballero M. Evaluation of the polymerase chain reaction method for detection of Streptococcus pneumoniae DNA in pleural fluid samples. Chest. 2002;122:2212-2216. (Pubitemid 36051161)
    • (2002) Chest , vol.122 , Issue.6 , pp. 2212-2216
    • Falguera, M.1    Lopez, A.2    Nogues, A.3    Porcel, J.M.4    Rubio-Caballero, M.5
  • 10
    • 33644910759 scopus 로고    scopus 로고
    • Analysis of 525 samples to determine the usefulness of PCR amplification and sequencing of the 16S rRNA gene for diagnosis of bone and joint infections
    • Fenollar F, Roux V, Stein A, Drancourt M, Raoult D. Analysis of 525 samples to determine the usefulness of PCR amplification and sequencing of the 16S rRNA gene for diagnosis of bone and joint infections. J Clin Microbiol. 2006;44: 1018-1028.
    • (2006) J Clin Microbiol. , vol.44 , pp. 1018-1028
    • Fenollar, F.1    Roux, V.2    Stein, A.3    Drancourt, M.4    Raoult, D.5
  • 12
    • 34249796672 scopus 로고    scopus 로고
    • Bacteriology of complicated parapneumonic effusions
    • DOI 10.1097/MCP.0b013e3281864691, PII 0006319820070700000014
    • Foster S, Maskell N. Bacteriology of complicated parapneumonic effusions. Curr Opin Pulm Med. 2007;13:319-323. (Pubitemid 46847298)
    • (2007) Current Opinion in Pulmonary Medicine , vol.13 , Issue.4 , pp. 319-323
    • Foster, S.1    Maskell, N.2
  • 14
    • 1842409545 scopus 로고    scopus 로고
    • Molecular diagnosis of bacterial endocarditis by broad-range PCR amplification and direct sequencing
    • Goldenberger D, Kunzli A, Vogt P, Zbinden R, Altwegg M. Molecular diagnosis of bacterial endocarditis by broad-range PCR amplification and direct sequencing. J Clin Microbiol. 1997;35:2733-2739. (Pubitemid 27452399)
    • (1997) Journal of Clinical Microbiology , vol.35 , Issue.11 , pp. 2733-2739
    • Goldenberger, D.1    Kunzli, A.2    Vogt, P.3    Zbinden, R.4    Altwegg, M.5
  • 15
    • 0030990840 scopus 로고    scopus 로고
    • Parapneumonic effusion and empyema
    • Hamm H, Light RW. Parapneumonic effusion and empyema. Eur Respir J. 1997;10:1150-1156. (Pubitemid 27201824)
    • (1997) European Respiratory Journal , vol.10 , Issue.5 , pp. 1150-1156
    • Hamm, H.1    Light, R.W.2
  • 16
    • 0043030063 scopus 로고    scopus 로고
    • Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service
    • DOI 10.1099/jmm.0.05213-0
    • Harris KA, Hartley JC. Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service. J Med Microbiol. 2003;52:685-691. (Pubitemid 36981477)
    • (2003) Journal of Medical Microbiology , vol.52 , Issue.8 , pp. 685-691
    • Harris, K.A.1    Hartley, J.C.2
  • 17
    • 0030914897 scopus 로고    scopus 로고
    • Broad-spectrum bacterial rDNA polymerase chain reaction assay for detecting amniotic fluid infection among women in premature labor
    • Hitti J, Riley DE, Krohn MA, Hillier SL, Agnew KJ, Krieger JN, Eschenbach DA. Broad-spectrum bacterial rDNA polymerase chain reaction assay for detecting amniotic fluid infection among women in premature labor. Clin Infect Dis. 1997;24: 1228-1232. (Pubitemid 27249029)
    • (1997) Clinical Infectious Diseases , vol.24 , Issue.6 , pp. 1228-1232
    • Hitti, J.1    Riley, D.E.2    Krohn, M.A.3    Hillier, S.L.4    Agnew, K.J.5    Krieger, J.N.6    Eschenbach, D.A.7
  • 19
    • 0031724491 scopus 로고    scopus 로고
    • 16S ribosomal DNA typing for identification of pathogens in patients with bacterial keratitis
    • Knox CM, Cevellos V, Dean D. 16S ribosomal DNA typing for identification of pathogens in patients with bacterial keratitis. J Clin Microbiol. 1998;36:3492-3496. (Pubitemid 28533216)
    • (1998) Journal of Clinical Microbiology , vol.36 , Issue.12 , pp. 3492-3496
    • Knox, C.M.1    Cevellos, V.2    Dean, D.3
  • 23
    • 0037141853 scopus 로고    scopus 로고
    • Clinical practice. Pleural effusion
    • Light RW. Clinical practice. Pleural effusion. N Engl J Med. 2002;346:1971-1977.
    • (2002) N Engl J Med. , vol.346 , pp. 1971-1977
    • Light, R.W.1
  • 24
    • 33644501812 scopus 로고    scopus 로고
    • Parapneumonic effusions and empyema
    • Light RW. Parapneumonic effusions and empyema. Proc Am Thorac Soc. 2006;3:75-80.
    • (2006) Proc Am Thorac Soc. , vol.3 , pp. 75-80
    • Light, R.W.1
  • 25
    • 0004207479 scopus 로고    scopus 로고
    • Philadelphia: Lippincott Williams & Wilkins
    • Light RW. Pleural Diseases. 5th ed. Philadelphia: Lippincott Williams & Wilkins; 2007.
    • (2007) Pleural Diseases. 5th ed.
    • Light, R.W.1
  • 27
    • 34447507593 scopus 로고    scopus 로고
    • Molecular diagnosis of infective endocarditis by real-time broad-range polymerase chain reaction (PCR) and sequencing directly from heart valve tissue
    • DOI 10.1097/MD.0b013e31811f44ec, PII 0000579220070700000001
    • Marin M, Munoz P, Sanchez M, del Rosal M, Alcala L, Rodriguez-Creixems M, Bouza E. Molecular diagnosis of infective endocarditis by real-time broad-range polymerase chain reaction (PCR) and sequencing directly from heart valve tissue. Medicine (Baltimore). 2007;86:195-202. (Pubitemid 47067477)
    • (2007) Medicine , vol.86 , Issue.4 , pp. 195-202
    • Marin, M.1    Munoz, P.2    Sanchez, M.3    Del Rosal, M.4    Alcala, L.5    Rodriguez-Creixems, M.6    Bouza, E.7
  • 29
    • 0037688044 scopus 로고    scopus 로고
    • BTS guidelines for the investigation of a unilateral pleural effusion in adults
    • Maskell NA, Butland RJ. BTS guidelines for the investigation of a unilateral pleural effusion in adults. Thorax. 2003;58(Suppl 2): ii8-ii17. (Pubitemid 36561104)
    • (2003) Thorax , vol.58 , Issue.SUPPL. 2
    • Maskell, N.A.1    Butland, R.J.A.2
  • 32
    • 0031974386 scopus 로고    scopus 로고
    • Identification of streptococci to species level by sequencing the gene encoding the manganese-dependent superoxide dismutase
    • Poyart C, Quesne G, Coulon S, Berche P, Trieu-Cuot P. Identification of streptococci to species level by sequencing the gene encoding the manganese-dependent superoxide dismutase. J Clin Microbiol. 1998;36:41-47. (Pubitemid 28047430)
    • (1998) Journal of Clinical Microbiology , vol.36 , Issue.1 , pp. 41-47
    • Poyart, C.1    Quesne, G.2    Coulon, S.3    Berche, P.4    Trieu-Cuot, P.5
  • 33
    • 60549103418 scopus 로고    scopus 로고
    • Comparison of broad range 16S rDNA PCR and conventional blood culture for diagnosis of sepsis in the newborn: A case control study
    • Reier-Nilsen T, Farstad T, Nakstad B, Lauvrak V, Steinbakk M. Comparison of broad range 16S rDNA PCR and conventional blood culture for diagnosis of sepsis in the newborn: a case control study. BMC Pediatr. 2009;9:5.
    • (2009) BMC Pediatr. , vol.9 , pp. 5
    • Reier-Nilsen, T.1    Farstad, T.2    Nakstad, B.3    Lauvrak, V.4    Steinbakk, M.5
  • 34
    • 11144228412 scopus 로고    scopus 로고
    • Empyema: The use of broad range 16S rDNA PCR for pathogen detection
    • DOI 10.1136/adc.2003.042176
    • Saglani S, Harris KA, Wallis C, Hartley JC. Empyema: the use of broad range 16S rDNA PCR for pathogen detection. Arch Dis Child. 2005;90:70-73. (Pubitemid 40052259)
    • (2005) Archives of Disease in Childhood , vol.90 , Issue.1 , pp. 70-73
    • Saglani, S.1    Harris, K.A.2    Wallis, C.3    Hartley, J.C.4
  • 35
    • 0034884297 scopus 로고    scopus 로고
    • Detection of bacteraemia in critically ill patients using 16S rDNA polymerase chain reaction and DNA sequencing
    • DOI 10.1007/s001340100981
    • Sleigh J, Cursons R, La Pine M. Detection of bacteraemia in critically ill patients using 16S rDNA polymerase chain reaction and DNA sequencing. Intensive Care Med. 2001;27:1269-1273. (Pubitemid 32758923)
    • (2001) Intensive Care Medicine , vol.27 , Issue.8 , pp. 1269-1273
    • Sleigh, J.1    Cursons, R.2    La Pine, M.3
  • 36
    • 38849150330 scopus 로고    scopus 로고
    • Broad-range bacterial PCR and meningitis with a negative Gram's stain [2]
    • DOI 10.1111/j.1469-0691.2007.01928-1.x
    • Steichen O. Broad-range bacterial PCR and meningitis with a negative Gram's stain. Clin Microbiol Infect. 2008;14:291; author reply 291-292. (Pubitemid 351201023)
    • (2008) Clinical Microbiology and Infection , vol.14 , Issue.3 , pp. 291
    • Steichen, O.1
  • 38
    • 43649097355 scopus 로고    scopus 로고
    • Pleural fluid PCR method for detection of Staphylococcus aureus, Streptococcus pneumoniae and Haemophilus influenzae in pediatric parapneumonic effusions
    • DOI 10.1159/000107741
    • Utine GE, Pinar A, Ozcelik U, Sener B, Yalcin E, Dogru D, Menemenlioglu D, Gur D, Kiper N, Gocmen A. Pleural fluid PCR method for detection of Staphylococcus aureus, Streptococcus pneumoniae and Haemophilus influenzae in pediatric parapneumonic effusions. Respiration. 2008;75:437-442. (Pubitemid 351685436)
    • (2008) Respiration , vol.75 , Issue.4 , pp. 437-442
    • Utine, G.E.1    Pinar, A.2    Ozcelik, U.3    Sener, B.4    Yalcin, E.5    Dogru, D.6    Menemenlioglu, D.7    Gur, D.8    Kiper, N.9    Gocmen, A.10
  • 41
    • 34547841273 scopus 로고    scopus 로고
    • Comparison of broad-range bacterial PCR and culture of cerebrospinal fluid for diagnosis of community-acquired bacterial meningitis
    • DOI 10.1111/j.1469-0691.2007.01756.x
    • Welinder-Olsson C, Dotevall L, Hogevik H, Jungnelius R, Trollfors B, Wahl M, Larsson P. Comparison of broad-range bacterial PCR and culture of cerebrospinal fluid for diagnosis of community-acquired bacterial meningitis. Clin Microbiol Infect. 2007;13:879-886. (Pubitemid 47244137)
    • (2007) Clinical Microbiology and Infection , vol.13 , Issue.9 , pp. 879-886
    • Welinder-Olsson, C.1    Dotevall, L.2    Hogevik, H.3    Jungnelius, R.4    Trollfors, B.5    Wahl, M.6    Larsson, P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.