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Bioinformatics

Volumn 28, Issue 5, 2012, Pages 750-751

  Syed, Mustafa H ^a   Karpinets, Tatiana V ^a,b   Parang, Morey ^a   Leuze, Michael R ^a   Park, Byung H ^a   Hyatt, Doug ^a   Brown, Steven D ^a   Moulton, Steve ^a   Galloway, Michael D ^a   Uberbacher, Edward C ^a  

^a OAK RIDGE NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF TENNESSEE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOFUEL;

ARTICLE; BACTERIUM; EUKARYOTE; GENOMICS; KNOWLEDGE BASE; METABOLISM; PLANT;

BACTERIA; BIOFUELS; EUKARYOTA; GENOMICS; KNOWLEDGE BASES; PLANTS;

EID: 84857836742     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts016     Document Type: Article

References (14)

1. Boyle,J. (2005) Gene-Expression Omnibus integration and clustering tools in SeqExpress. Bioinformatics, 21, 2550-2551.
2. Brown,S.D. et al. (2011) Mutant alcohol dehydrogenase leads to improved ethanol tolerance in Clostridium thermocellum. Proc. Natl Acad. Sci. USA, 108, 13752-13757.
3. Farrell,A.E. (2006) Ethanol can contribute to energy and environmental goals (vol 311, pg 506, 2006). Science, 312, 1748-1748.
4. Gnansounou,E. and Dauriat,A. (2010) Techno-economic analysis of lignocellulosic ethanol: a review. Bioresource Technol., 101, 4980-4991.
5. Karp,P.D. et al. (2010) Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology. Brief. Bioinform., 11, 40-79.
6. Kikuchi,T. et al. (2011) Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathog., 7, e1002219.
7. Lynd,L.R. et al. (2005) Consolidated bioprocessing of cellulosic biomass: an update. Curr. Opin. Biotechnol., 16, 577-583.
8. Mao,F. et al. (2009) DOOR: a database for prokaryotic operons. Nucleic Acids Res., 37, D459-D463.
9. Moriya,Y. et al. (2007) KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Res., 35, W182-W185.
10. Park,B.H. et al. (2010) CAZymes Analysis Toolkit (CAT): web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database. Glycobiology, 20, 1574-1584.
11. Rubin,E.M. (2008) Genomics of cellulosic biofuels. Nature, 454, 841-845.
12. Stein,L.D. et al. (2002) The generic genome browser: a building block for a model organism system database. Genome Res., 12, 1599-1610.
13. Stephanopoulos,G. (2007) Challenges in engineering microbes for biofuels production. Science, 315, 801-804.
14. Zacchi,G. et al. (2006) Bio-ethanol - the fuel of tomorrow from the residues of today. Trends Biotechnol., 24, 549-556.