Pathogen identification with laser-induced breakdown spectroscopy: The effect of bacterial and biofluid specimen contamination

Applied Optics

Volumn 51, Issue 7, 2012, Pages

  Mohaidat, Qassem I ^a   Sheikh, Khadija ^b   Palchaudhuri, Sunil ^a   Rehse, Steven J ^b  

^a WAYNE STATE UNIVERSITY   (United States)

^b UNIVERSITY OF WINDSOR   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ATOMIC EMISSION SPECTROSCOPY; BODY FLUIDS; ESCHERICHIA COLI; LASER INDUCED BREAKDOWN SPECTROSCOPY; MIXTURES; PATHOGENS; SPECTROSCOPY; WATER POLLUTION;

BACTERIAL PATHOGENS; ENTEROBACTER CLOACAE; LASERINDUCED BREAKDOWN SPECTROSCOPY (LIBS); MISCLASSIFICATIONS; PATHOGEN IDENTIFICATION; STAPHYLOCOCCUS EPIDERMIDIS; TAXONOMIC GROUPS; URINARY TRACT INFECTIONS;

BACTERIA;

ARTICLE; CLASSIFICATION; ENTEROBACTER CLOACAE; ESCHERICHIA COLI; ISOLATION AND PURIFICATION; LASER; METHODOLOGY; SPECTROSCOPY; STAPHYLOCOCCUS EPIDERMIDIS; VALIDATION STUDY;

ENTEROBACTER CLOACAE; ESCHERICHIA COLI; LASERS; SPECTRUM ANALYSIS; STAPHYLOCOCCUS EPIDERMIDIS;

EID: 84857802924     PISSN: 1559128X     EISSN: 15394522     Source Type: Journal    
DOI: 10.1364/AO.51.000B99     Document Type: Conference Paper

References (19)

1. A. C. Samuels, F. C. DeLucia Jr., K. L. McNesby, and A. W. Miziolek, "Laser-induced breakdown spectroscopy of bacterial spores, molds, pollens, and protein: initial studies of discrimination potential," Appl. Opt. 42, 6205-6209 (2003).
2. P. B. Dixon and D. W. Hahn, "Feasibility of detection and identification of individual bioaerosols using laser-induced breakdown spectroscopy," Anal. Chem. 77, 631-638 (2005). (Pubitemid 40116846)
3. M. Baudelet, J. Yu, M. Bossu, J. Jovelet, J.-P. Wolf, T. Amodeo, E. Frejafon, and P. Laloi, "Discrimination of microbiological samples using femtosecond laser-induced breakdown spectroscopy," Appl. Phys. Lett. 89, 163903 (2006).
4. M. Baudelet, L. Guyon, J. Yu, J.-P.Wolf, T. Amodeo, E. Frejafon, and P. Laloi, "Femtosecond time-resolved laser-induced breakdown spectroscopy for detection and identification of bacteria: a comparison to the nanosecond regime," J. Appl. Phys. 99, 084701 (2006).
5. J. Diedrich, S. J. Rehse, and S. Palchaudhuri, "Escherichia coli identification and strain discrimination using nanosecond laser-induced breakdown spectroscopy," Appl. Phys. Lett. 90, 163901 (2007).
6. J. Diedrich, S. J. Rehse, and S. Palchaudhuri, "Pathogenic Escherichia coli strain discrimination using laser-induced breakdown spectroscopy," J. Appl. Phys. 102, 014702 (2007).
7. S. J. Rehse, Q. I. Mohaidat, and S. Palchaudhuri, "Towards the clinical application of laser-induced breakdown spectroscopy for rapid pathogen diagnosis: the effect of mixed cultures and sample dilution on bacterial identification," Appl. Opt. 49, C27-C35 (2010).
8. R. Multari, D. A. Cremers, J. M. Dupre, and J. E. Gustafson, "The use of laser-induced breakdown spectroscopy for distinguishing between bacterial pathogen species and strains," Appl. Spectrosc. 64, 750-759 (2010).
9. Q. Mohaidat, S. Palchaudhuri, and S. J. Rehse, "The effect of bacterial environmental and metabolic stresses on a LIBSbased identification of Escherichia coli and Streptococcus viridans," Appl. Spectrosc. 65, 386-392 (2011).
10. D. Marcos-Martinez, J. A. Ayala, R. C. Izquierdo-Hornillos, F. J. de Villena, and J. O. Caceres, "Identification and discrimination of bacterial strains by laser induced breakdown spectroscopy and neural networks," Talanta 84, 730-737 (2011).
11. C. A. Munson, F. C. DeLucia Jr., T. Piehler, K. L. McNesby, and A. W. Miziolek, "Investigation of statistics strategies for improving the discriminating power of laser-induced breakdown spectroscopy for chemical and biological warfare agent simulants," Spectrochim. Acta B 60, 1217-1224 (2005). (Pubitemid 41375691)
12. M. Sabsabi, V. Detalle, M. A. Harith,W. Tawfik, and H. Imam, "Comparative study of two new commercial echelle spectrometers equipped with intensified CCD for analysis of laserinduced breakdown spectroscopy," Appl. Opt. 42, 6094-6099 (2003).
13. B. Foxman, R. Barlow, H. D'Arcy, B. Gillespie, and J. D. Sobel, "Urinary tract infection: self-reported incidence and associated costs," Ann. Epidemiol. 10, 509-515 (2000).
14. P. Whiting, M. Westwood, I. Watt, J. Cooper, and J. Kleijnen, "Rapid tests and urine sampling techniques for the diagnosis of urinary tract infection (UTI) in children under five years: a systematic review," BMC Pediatr. 5, 1471-2431 (2005).
15. V. A. Fischetti, R. P. Novick, J. J. Ferretti, D. A. Portnoy, and J. I. Rood, Gram-Positive Pathogens, 2nd ed. (ASM, 2006).
16. N. De and M. Godlove, "Prevalence of S. aureus and S. epidermidis among patients with indwelling catheters and their antibiogram using some commonly used antibiotics," J. Am. Sci. 6, 515-520 (2010).
17. D. E. Hall and J. A. Snitzer, III, "Staphylococcus epidermidis as a cause of urinary tract infections in children," J. Pediatr. 124, 437-438 (1994). (Pubitemid 24094457)
18. M. Schaechter, N. C. Engleberg, B. I. Eisenstein, and G. Medoff, eds., Mechanisms of Microbial Disease, 3rd ed. (ASM, 1999).
19. L. O. Conterno, J. Shymanski, K. Ramotar, B. Toye, C. van Walraven, D. Coyle, and V. R. Roth, "Real-Time polymerase chain reaction detection of methicillin-resistant Staphylococcus aureus: impact on nosocomial transmission and costs," Infect. Cont. Hosp. Ep. 28, 1134-1141 (2007). (Pubitemid 47580455)