메뉴 건너뛰기




Volumn 7, Issue 2, 2012, Pages

Asymmetric stochastic switching driven by intrinsic molecular noise

Author keywords

[No Author keywords available]

Indexed keywords

GALACTOSE;

EID: 84857399077     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0031407     Document Type: Article
Times cited : (56)

References (43)
  • 1
    • 34347260600 scopus 로고    scopus 로고
    • Living with noise genes: how cells function reliably with inherent variability in gene expression
    • Maheshri N, O'Shea EK, (2007) Living with noise genes: how cells function reliably with inherent variability in gene expression. Annu Rev Biophys Biomol Struct 36: 413-434.
    • (2007) Annu Rev Biophys Biomol Struct , vol.36 , pp. 413-434
    • Maheshri, N.1    O'Shea, E.K.2
  • 2
    • 53549123008 scopus 로고    scopus 로고
    • Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
    • Raj A, van Oudenaarden A, (2008) Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences. Nature 135: 216-226.
    • (2008) Nature , vol.135 , pp. 216-226
    • Raj, A.1    van Oudenaarden, A.2
  • 3
    • 41749107942 scopus 로고    scopus 로고
    • Stochasticity and cell fate
    • Losick R, Desplan C, (2008) Stochasticity and cell fate. Science 320: 65-68.
    • (2008) Science , vol.320 , pp. 65-68
    • Losick, R.1    Desplan, C.2
  • 4
    • 77956520011 scopus 로고    scopus 로고
    • Functional roles for noise in genetic circuits
    • Eldar A, Elowitz MB, (2010) Functional roles for noise in genetic circuits. Nature 467: 167-173.
    • (2010) Nature , vol.467 , pp. 167-173
    • Eldar, A.1    Elowitz, M.B.2
  • 5
    • 79952638264 scopus 로고    scopus 로고
    • Cellular decision making and biological noise: from microbes to mammals
    • Balázsi G, van Oudenaarden A, Collins JJ, (2011) Cellular decision making and biological noise: from microbes to mammals. Cell 144: 910-25.
    • (2011) Cell , vol.144 , pp. 910-925
    • Balázsi, G.1    van Oudenaarden, A.2    Collins, J.J.3
  • 6
    • 18744361871 scopus 로고    scopus 로고
    • Enhancement of cellular memory by reducing stochastic transitions
    • Acar M, Becksei A, van Oudenaarden A, (2005) Enhancement of cellular memory by reducing stochastic transitions. Nature 435: 228-232.
    • (2005) Nature , vol.435 , pp. 228-232
    • Acar, M.1    Becksei, A.2    van Oudenaarden, A.3
  • 7
    • 34547604468 scopus 로고    scopus 로고
    • Noise in gene expression determines cell fate in Bacillus subtilis
    • Maamar H, Raj A, Dubnau D, (2007) Noise in gene expression determines cell fate in Bacillus subtilis. Science 317: 526-529.
    • (2007) Science , vol.317 , pp. 526-529
    • Maamar, H.1    Raj, A.2    Dubnau, D.3
  • 9
    • 33644856456 scopus 로고    scopus 로고
    • Stochastic spineless expression creates the retinal mosaic for colour vision
    • Wernet MF, Mazzoni EO, Celik A, Duncan DM, Duncan I, et al. (2006) Stochastic spineless expression creates the retinal mosaic for colour vision. Nature 440: 174-80.
    • (2006) Nature , vol.440 , pp. 174-180
    • Wernet, M.F.1    Mazzoni, E.O.2    Celik, A.3    Duncan, D.M.4    Duncan, I.5
  • 10
    • 37549002155 scopus 로고    scopus 로고
    • Nanog safeguards pluripotency and mediates germline development
    • Chambers I, Silva J, Colby D, Nichols J, Nijmeijer B, et al. (2007) Nanog safeguards pluripotency and mediates germline development. Nature 450: 1230-1234.
    • (2007) Nature , vol.450 , pp. 1230-1234
    • Chambers, I.1    Silva, J.2    Colby, D.3    Nichols, J.4    Nijmeijer, B.5
  • 11
    • 44349162752 scopus 로고    scopus 로고
    • Transcriptome-wide noise controls lineage choice in mammalian progenitor cells
    • Chang H, Hemnberg M, Barahona M, Ingber D, Huang S, (2008) Transcriptome-wide noise controls lineage choice in mammalian progenitor cells. Nature 453: 544-547.
    • (2008) Nature , vol.453 , pp. 544-547
    • Chang, H.1    Hemnberg, M.2    Barahona, M.3    Ingber, D.4    Huang, S.5
  • 12
    • 68049139696 scopus 로고    scopus 로고
    • Regulated fluctuations in nanog expression mediate cell fate decisions in embryonic stem cells
    • Kalmar T, Lim C, Hayward P, Muñoz-Descalzo S, Nichols J, et al. (2009) Regulated fluctuations in nanog expression mediate cell fate decisions in embryonic stem cells. Plos Biology 7: e1000149.
    • (2009) Plos Biology , vol.7
    • Kalmar, T.1    Lim, C.2    Hayward, P.3    Muñoz-Descalzo, S.4    Nichols, J.5
  • 13
    • 41349119880 scopus 로고    scopus 로고
    • Stochastic switching as a survival strategy in fluctuating environments
    • Acar M, Mettetal JM, van Oudenaarden A, (2008) Stochastic switching as a survival strategy in fluctuating environments. Nature genetics 40: 471-475.
    • (2008) Nature Genetics , vol.40 , pp. 471-475
    • Acar, M.1    Mettetal, J.M.2    van Oudenaarden, A.3
  • 14
    • 25444489027 scopus 로고    scopus 로고
    • Phenotypic Diversity, Population Growth, and Information in Fluctuating Environments
    • Kussell E, Leibler S, (2005) Phenotypic Diversity, Population Growth, and Information in Fluctuating Environments. Science 309: 2075-2078.
    • (2005) Science , vol.309 , pp. 2075-2078
    • Kussell, E.1    Leibler, S.2
  • 15
    • 0037376655 scopus 로고    scopus 로고
    • Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell
    • Tyson JJ, Chen KC, Novak B, (2003) Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell. Curr Opin Cell Biol 15: 221-231.
    • (2003) Curr Opin Cell Biol , vol.15 , pp. 221-231
    • Tyson, J.J.1    Chen, K.C.2    Novak, B.3
  • 16
    • 0001389945 scopus 로고
    • Enzyme induction as an all-or-none phenomenon
    • Novick A, Weiner M, (1957) Enzyme induction as an all-or-none phenomenon. Proc Natl Acad Sci U S A 43: 553-567.
    • (1957) Proc Natl Acad Sci U S A , vol.43 , pp. 553-567
    • Novick, A.1    Weiner, M.2
  • 17
    • 0032496358 scopus 로고    scopus 로고
    • The Biochemical Basis of an All-or-None Cell Fate Switch in Xenopus Oocytes
    • Ferrell JE Jr, Machleder EM, (1998) The Biochemical Basis of an All-or-None Cell Fate Switch in Xenopus Oocytes. Science 280: 895-898.
    • (1998) Science , vol.280 , pp. 895-898
    • Ferrell Jr., J.E.1    Machleder, E.M.2
  • 19
    • 33645097646 scopus 로고    scopus 로고
    • Multistable and multistep dynamics in neutrophil differentiation
    • Chang HH, Oh PY, Ingber DE, Huang S, (2006) Multistable and multistep dynamics in neutrophil differentiation. BMC Cell Biology 7: 11.
    • (2006) BMC Cell Biology , vol.7 , pp. 11
    • Chang, H.H.1    Oh, P.Y.2    Ingber, D.E.3    Huang, S.4
  • 20
    • 58149331213 scopus 로고    scopus 로고
    • A spatial toggle switch drives boundary formation in development
    • Canela-Xandri O, Sagués F, Reigada R, Buceta J, (2008) A spatial toggle switch drives boundary formation in development. Biophys J 95: 5111-5120.
    • (2008) Biophys J , vol.95 , pp. 5111-5120
    • Canela-Xandri, O.1    Sagués, F.2    Reigada, R.3    Buceta, J.4
  • 21
    • 0034688174 scopus 로고    scopus 로고
    • Construction of a genetic toggle switch in Escherichia coli
    • Gardner TS, Cantor CR, Collins JJ, (2000) Construction of a genetic toggle switch in Escherichia coli. Nature 403: 339-342.
    • (2000) Nature , vol.403 , pp. 339-342
    • Gardner, T.S.1    Cantor, C.R.2    Collins, J.J.3
  • 22
    • 17144456808 scopus 로고    scopus 로고
    • Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response
    • Becksei A, Seraphin B, Serrano L, (2001) Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response. The EMBO Journal 20: 2528-2535.
    • (2001) The EMBO Journal , vol.20 , pp. 2528-2535
    • Becksei, A.1    Seraphin, B.2    Serrano, L.3
  • 23
    • 0038241770 scopus 로고    scopus 로고
    • Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli
    • Atkinson MR, Savageau MA, Myers JT, Ninfa AJ, (2003) Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli. Cell 113: 597-607.
    • (2003) Cell , vol.113 , pp. 597-607
    • Atkinson, M.R.1    Savageau, M.A.2    Myers, J.T.3    Ninfa, A.J.4
  • 25
    • 0347867303 scopus 로고    scopus 로고
    • Stability and noise in biochemical switches
    • In: Leen TK, Dietterich TG, Tresp V, editors, Cambridge, MIT Press
    • Bialek W, (2000) Stability and noise in biochemical switches. In: Leen TK, Dietterich TG, Tresp V, editors. Advances in Neural Information Processing Cambridge MIT Press pp. 103-109.
    • (2000) Advances in Neural Information Processing , pp. 103-109
    • Bialek, W.1
  • 26
    • 2342464752 scopus 로고    scopus 로고
    • Enhancement of the Stability of Genetic Switches by overlapping Upstream Regulatory Domains
    • Warren PW, ten Wolde PR, (2004) Enhancement of the Stability of Genetic Switches by overlapping Upstream Regulatory Domains. Phys Rev Lett 92: 128101-128105.
    • (2004) Phys Rev Lett , vol.92 , pp. 128101-128105
    • Warren, P.W.1    ten Wolde, P.R.2
  • 27
    • 18144425774 scopus 로고    scopus 로고
    • Sampling rare switching events in biochemical networks
    • Allen RJ, Warren PW, ten Wolde PR, (2005) Sampling rare switching events in biochemical networks. Phys Rev Lett 94: 018104.
    • (2005) Phys Rev Lett , vol.94 , pp. 018104
    • Allen, R.J.1    Warren, P.W.2    ten Wolde, P.R.3
  • 28
    • 0035193294 scopus 로고    scopus 로고
    • Stochasticity in transcriptional regulation: Origins, consequences, and mathematical representations
    • Kepler TB, Elston TC, (2001) Stochasticity in transcriptional regulation: Origins, consequences, and mathematical representations. Biophys J 81: 3116-3136.
    • (2001) Biophys J , vol.81 , pp. 3116-3136
    • Kepler, T.B.1    Elston, T.C.2
  • 29
    • 0345359924 scopus 로고    scopus 로고
    • A positive-feedback-based bistable 'memory module' that governs a cell fate decision
    • Xiong W, Ferrell JE Jr, (2003) A positive-feedback-based bistable 'memory module' that governs a cell fate decision. Nature 426: 460-465.
    • (2003) Nature , vol.426 , pp. 460-465
    • Xiong, W.1    Ferrell Jr., J.E.2
  • 31
    • 54849407133 scopus 로고    scopus 로고
    • Robustness analysis of celular memory in an autoactivating positive feedback system
    • Cheng Z, Liu F, Zhang X, Wang W, (2008) Robustness analysis of celular memory in an autoactivating positive feedback system. FEBS Letters 582: 3776-3782.
    • (2008) FEBS Letters , vol.582 , pp. 3776-3782
    • Cheng, Z.1    Liu, F.2    Zhang, X.3    Wang, W.4
  • 34
    • 33645429016 scopus 로고
    • Exact Stochastic Simulation of Coupled Chemical Reactions
    • Gillespie DT, (1977) Exact Stochastic Simulation of Coupled Chemical Reactions. The Journal of Physical Chemistry 81: 2340-2361.
    • (1977) The Journal of Physical Chemistry , vol.81 , pp. 2340-2361
    • Gillespie, D.T.1
  • 40
    • 0842285841 scopus 로고    scopus 로고
    • Summing up the noise in gene networks
    • Paulsson J, (2004) Summing up the noise in gene networks. Nature 427: 415-18.
    • (2004) Nature , vol.427 , pp. 415-418
    • Paulsson, J.1
  • 41
    • 0004062749 scopus 로고    scopus 로고
    • Wolfram Research, Inc, Software
    • Wolfram Research, Inc (2008) "Mathematica 8" Software.
    • (2008) Mathematica , vol.8
  • 42
    • 77955830290 scopus 로고    scopus 로고
    • Biological role of noise encoded in a genetic network motif
    • Kittisopikul M, Süel GM, (2010) Biological role of noise encoded in a genetic network motif. Proc Natl Acad Sci USA 107: 13300-5.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 13300-13305
    • Kittisopikul, M.1    Süel, G.M.2
  • 43
    • 57349131603 scopus 로고    scopus 로고
    • A genetic timer through noise-induced stabilization of an unstable state
    • Turcotte M, García-Ojalvo J, Süel GM, (2008) A genetic timer through noise-induced stabilization of an unstable state. Proc Natl Acad Sci USA 105 (41): 15732-7.
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.41 , pp. 15732-15737
    • Turcotte, M.1    García-Ojalvo, J.2    Süel, G.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.