-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. 1997. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
55249099284
-
Life history determines genetic structure and evolutionary potential of host-parasite interactions
-
Barrett, L. G., Thrall, P. H., Burdon, J. J., and Linde, C. C. 2008. Life history determines genetic structure and evolutionary potential of host-parasite interactions. Trends Ecol. Evol. 23:678-685.
-
(2008)
Trends Ecol. Evol
, vol.23
, pp. 678-685
-
-
Barrett, L.G.1
Thrall, P.H.2
Burdon, J.J.3
Linde, C.C.4
-
3
-
-
0037394872
-
Spatial and temporal analysis of the microbial community in slow sand filters used for treating horticultural irrigation water
-
Calvo-Bado, L. A., Pettitt, T. R., Parsons, N., Petch, G. M., Morgan, J. A. W., and Whipps, J. M. 2003. Spatial and temporal analysis of the microbial community in slow sand filters used for treating horticultural irrigation water. Appl. Environ. Microbiol. 69:2116-2125.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 2116-2125
-
-
Calvo-Bado, L.A.1
Pettitt, T.R.2
Parsons, N.3
Petch, G.M.4
Morgan, J.A.W.5
Whipps, J.M.6
-
4
-
-
0033771358
-
TCS: A computer program to estimate gene genealogies
-
Clement, M., Posada, D., and Crandall, K. 2000. TCS: A computer program to estimate gene genealogies. Mol. Ecol. 9:1657-1660.
-
(2000)
Mol. Ecol
, vol.9
, pp. 1657-1660
-
-
Clement, M.1
Posada, D.2
Crandall, K.3
-
6
-
-
0041817568
-
Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
-
Falush, D., Stephens, M., and Pritchard, J. K. 2003. Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies. Genetics 164:1567-1587.
-
(2003)
Genetics
, vol.164
, pp. 1567-1587
-
-
Falush, D.1
Stephens, M.2
Pritchard, J.K.3
-
7
-
-
33644690763
-
Characterization of Phytophthora capsici associated with roots of weeds on Florida vegetable farms
-
French-Monar, R. D., Jones, J. B., and Roberts, P. D. 2006. Characterization of Phytophthora capsici associated with roots of weeds on Florida vegetable farms. Plant Dis. 90:345-350.
-
(2006)
Plant Dis
, vol.90
, pp. 345-350
-
-
French-Monar, R.D.1
Jones, J.B.2
Roberts, P.D.3
-
8
-
-
0042922596
-
Application of selected antagonistic strains against Phytophthora cryptogea on gerbera in closed soilless systems with disinfection by slow sand filtration
-
Garibaldi, A., Minuto, A., Grasso, V., and Gullino, M. L. 2003. Application of selected antagonistic strains against Phytophthora cryptogea on gerbera in closed soilless systems with disinfection by slow sand filtration. Crop Prot. 22:1053-1061.
-
(2003)
Crop Prot
, vol.22
, pp. 1053-1061
-
-
Garibaldi, A.1
Minuto, A.2
Grasso, V.3
Gullino, M.L.4
-
9
-
-
33947659416
-
Characterization of Phytophthora capsici from Michigan surface irrigation water
-
Gevens, A. J., Donahoo, R. S., Lamour, K. H., and Hausbeck, M. K. 2007. Characterization of Phytophthora capsici from Michigan surface irrigation water. Phytopathology 97:421-428.
-
(2007)
Phytopathology
, vol.97
, pp. 421-428
-
-
Gevens, A.J.1
Donahoo, R.S.2
Lamour, K.H.3
Hausbeck, M.K.4
-
10
-
-
65649150727
-
An in-situ baiting bioassay for detecting Phytophthora species in irrigation runoff containment basins
-
Ghimire, S. R., Richardson, P. A., Moorman, G. W., Lea-Cox, J. D., Ross, D. S., and Hong, C. X. 2009. An in-situ baiting bioassay for detecting Phytophthora species in irrigation runoff containment basins. Plant Pathol. 58:577-583.
-
(2009)
Plant Pathol
, vol.58
, pp. 577-583
-
-
Ghimire, S.R.1
Richardson, P.A.2
Moorman, G.W.3
Lea-Cox, J.D.4
Ross, D.S.5
Hong, C.X.6
-
11
-
-
0029661745
-
Resistance to phenylamide fungicides: A case study with Phytophthora infestans involving mating type and race structure
-
Gisi, U., and Cohen, Y. 1996. Resistance to phenylamide fungicides: A case study with Phytophthora infestans involving mating type and race structure. Annu. Rev. Phytopathol. 34:549-572.
-
(1996)
Annu. Rev. Phytopathol
, vol.34
, pp. 549-572
-
-
Gisi, U.1
Cohen, Y.2
-
12
-
-
75649134569
-
Effects of temperature, concentration, age, and algaecides on Phytophthora capsici zoospore infec-tivity
-
Granke, L. L., and Hausbeck, M. K. 2010. Effects of temperature, concentration, age, and algaecides on Phytophthora capsici zoospore infec-tivity. Plant Dis. 94:54-60.
-
(2010)
Plant Dis
, vol.94
, pp. 54-60
-
-
Granke, L.L.1
Hausbeck, M.K.2
-
13
-
-
9344249530
-
Phytophthora capsici on vegetable crops: Research progress and management challenges
-
Hausbeck, M. K., and Lamour, K. H. 2004. Phytophthora capsici on vegetable crops: Research progress and management challenges. Plant Dis. 88:1292-1303.
-
(2004)
Plant Dis
, vol.88
, pp. 1292-1303
-
-
Hausbeck, M.K.1
Lamour, K.H.2
-
14
-
-
47349120115
-
Pathogenicity to ornamental plants of some existing species and new taxa of Phytophthora from irrigation water
-
Hong, C., Richardson, P. A., and Kong, P. 2008. Pathogenicity to ornamental plants of some existing species and new taxa of Phytophthora from irrigation water. Plant Dis. 92:1201-1207.
-
(2008)
Plant Dis
, vol.92
, pp. 1201-1207
-
-
Hong, C.1
Richardson, P.A.2
Kong, P.3
-
15
-
-
0141724818
-
Efficacy of chlorine on multiple species of Phytophthora in recycled nursery irrigation water
-
Hong, C. X., Richardson, R. P., and Bush, E. A. 2003. Efficacy of chlorine on multiple species of Phytophthora in recycled nursery irrigation water. Plant Dis. 87:1183-1189.
-
(2003)
Plant Dis
, vol.87
, pp. 1183-1189
-
-
Hong, C.X.1
Richardson, R.P.2
Bush, E.A.3
-
16
-
-
33947508738
-
Phytophthora tropicalis isolated from diseased leaves on Pieris japonica and Rhododendron catawbiense and found in irrigation water and soil in Virginia
-
Hong, C. X., Richardson, P. A., Kong, P., Jeffers, S. N., and Oak, S. W. 2006. Phytophthora tropicalis isolated from diseased leaves on Pieris japonica and Rhododendron catawbiense and found in irrigation water and soil in Virginia. Plant Dis. 90:525.
-
(2006)
Plant Dis
, vol.90
, pp. 525
-
-
Hong, C.X.1
Richardson, P.A.2
Kong, P.3
Jeffers, S.N.4
Oak, S.W.5
-
17
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson, R. R., and Kaplan, N. L. 1985. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
18
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson, D. H., and Bryant, D. 2006. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23:254-267.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
19
-
-
12444261814
-
Characterization of Phytophthora capsici isolates from processing pumpkin in Illinois
-
Islam, S. Z., Babadoost, M., Lambert, K. N., Ndeme, A., and Fouly, H. M. 2004. Characterization of Phytophthora capsici isolates from processing pumpkin in Illinois. Plant Dis. 89:191-197.
-
(2004)
Plant Dis
, vol.89
, pp. 191-197
-
-
Islam, S.Z.1
Babadoost, M.2
Lambert, K.N.3
Ndeme, A.4
Fouly, H.M.5
-
20
-
-
48549094733
-
Comparative epidemiology of zoosporic plant pathogens
-
Jeger, M. J., and Pautasso, M. 2008. Comparative epidemiology of zoosporic plant pathogens. Eur. J. Plant Pathol. 122:111-126.
-
(2008)
Eur. J. Plant Pathol
, vol.122
, pp. 111-126
-
-
Jeger, M.J.1
Pautasso, M.2
-
21
-
-
15944406233
-
Long-term storage and survival structure of three species of Phytophthora in water
-
Ko, W. H. 2003. Long-term storage and survival structure of three species of Phytophthora in water. J. Gen. Plant Pathol. 69:186-188.
-
(2003)
J. Gen. Plant Pathol
, vol.69
, pp. 186-188
-
-
Ko, W.H.1
-
22
-
-
0038378949
-
A species-specific polymerase chain reaction assay for rapid detection of Phytophthora nicotianae in irrigation water
-
Kong, P., Hong, C., Jeffers, S. N., and Richardson, P. A. 2003. A species-specific polymerase chain reaction assay for rapid detection of Phytophthora nicotianae in irrigation water. Phytopathology 93:822-831.
-
(2003)
Phytopathology
, vol.93
, pp. 822-831
-
-
Kong, P.1
Hong, C.2
Jeffers, S.N.3
Richardson, P.A.4
-
23
-
-
70350705531
-
Oomycete Genetics and Genomics: Diversity, Interactions, and Research Tools
-
K. Lamour and S. Kamoun, eds. John Wiley & Sons, Hoboken, NJ
-
Lamour, K. 2009. Phytophthora capsici: Sex, selection, and the wealth of variation. In: Oomycete Genetics and Genomics: Diversity, Interactions, and Research Tools. K. Lamour and S. Kamoun, eds. John Wiley & Sons, Hoboken, NJ.
-
(2009)
Phytophthora Capsici: Sex, Selection, and The Wealth of Variation
-
-
Lamour, K.1
-
24
-
-
0034063456
-
Mefenoxam insensitivity and the sexual stage of Phytophthora capsici in Michigan cucurbit fields
-
Lamour, K. H., and Hausbeck, M. K. 2000. Mefenoxam insensitivity and the sexual stage of Phytophthora capsici in Michigan cucurbit fields. Phytopathology 90:396-400.
-
(2000)
Phytopathology
, vol.90
, pp. 396-400
-
-
Lamour, K.H.1
Hausbeck, M.K.2
-
25
-
-
0034994797
-
The dynamics of mefenoxam insensitivity in a recombining population of Phytophthora capsici characterized with amplified fragment length polymorphism markers
-
Lamour, K. H., and Hausbeck, M. K. 2001. The dynamics of mefenoxam insensitivity in a recombining population of Phytophthora capsici characterized with amplified fragment length polymorphism markers. Phytopathology 91:553-557.
-
(2001)
Phytopathology
, vol.91
, pp. 553-557
-
-
Lamour, K.H.1
Hausbeck, M.K.2
-
26
-
-
0034792236
-
Investigating the spatiotemporal genetic structure of Phytophthora capsici in Michigan
-
Lamour, K. H., and Hausbeck, M. K. 2001. Investigating the spatiotemporal genetic structure of Phytophthora capsici in Michigan. Phytopathology 91:973-980.
-
(2001)
Phytopathology
, vol.91
, pp. 973-980
-
-
Lamour, K.H.1
Hausbeck, M.K.2
-
27
-
-
0036259720
-
The spatiotemporal genetic structure of Phytophthora capsici in Michigan and implications for disease management
-
Lamour, K. H., and Hausbeck, M. K. 2002. The spatiotemporal genetic structure of Phytophthora capsici in Michigan and implications for disease management. Phytopathology 92:681-684.
-
(2002)
Phytopathology
, vol.92
, pp. 681-684
-
-
Lamour, K.H.1
Hausbeck, M.K.2
-
28
-
-
0042360479
-
Effect of crop rotation on the survival of Phytophthora capsici in Michigan
-
Lamour, K. H., and Hausbeck, M. K. 2003. Effect of crop rotation on the survival of Phytophthora capsici in Michigan. Plant Dis. 87:841-845.
-
(2003)
Plant Dis
, vol.87
, pp. 841-845
-
-
Lamour, K.H.1
Hausbeck, M.K.2
-
29
-
-
0042125058
-
Susceptibility of mefenoxam-treated cucurbits to isolates of Phytophthora capsici sensitive and insensitive to mefenoxam
-
Lamour, K. H., and Hausbeck, M. K. 2003. Susceptibility of mefenoxam-treated cucurbits to isolates of Phytophthora capsici sensitive and insensitive to mefenoxam. Plant Dis. 87:920-922.
-
(2003)
Plant Dis
, vol.87
, pp. 920-922
-
-
Lamour, K.H.1
Hausbeck, M.K.2
-
30
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado, P., and Rozas, J. 2009. DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
32
-
-
33645030355
-
Does selection by resistant hosts trigger local adaptation in plant-pathogen systems
-
Montarry, J., Corbiere, R., Lesueur, S., Glais, I., and Andrivon, D. 2006. Does selection by resistant hosts trigger local adaptation in plant-pathogen systems? J. Evol. Biol. 19:522-531.
-
(2006)
J. Evol. Biol
, vol.19
, pp. 522-531
-
-
Montarry, J.1
Corbiere, R.2
Lesueur, S.3
Glais, I.4
Andrivon, D.5
-
33
-
-
0033049108
-
Phytophthora species associated with cranberry root rot and surface irrigation water in New Jersey
-
Oudemans, P. V. 1999. Phytophthora species associated with cranberry root rot and surface irrigation water in New Jersey. Plant Dis. 83:251-258.
-
(1999)
Plant Dis
, vol.83
, pp. 251-258
-
-
Oudemans, P.V.1
-
34
-
-
0034813367
-
Resistance to mefenoxam and metalaxyl among field isolates of Phytopththora capsici causing Phytophthora blight of bell pepper
-
Parra, G., and Ristaino, J. B. 2001. Resistance to mefenoxam and metalaxyl among field isolates of Phytopththora capsici causing Phytophthora blight of bell pepper. Plant Dis. 85:1069-1075.
-
(2001)
Plant Dis
, vol.85
, pp. 1069-1075
-
-
Parra, G.1
Ristaino, J.B.2
-
35
-
-
0036183042
-
The effect of recombination on the accuracy of phylogeny estimation
-
Posada, D., and Crandall, K. A. 2002. The effect of recombination on the accuracy of phylogeny estimation. J. Mol. Evol. 54:396-402.
-
(2002)
J. Mol. Evol
, vol.54
, pp. 396-402
-
-
Posada, D.1
Crandall, K.A.2
-
36
-
-
0034118493
-
Inference of population structure using multilocus genotypic data
-
Pritchard, J. K., Stephens, M., and Donnelly, P. 2000. Inference of population structure using multilocus genotypic data. Genetics 155:945-959.
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
37
-
-
60549112783
-
Susceptibility of Fraser fir to Phytophthora capsici
-
Quesada-Ocampo, L. M., Fulbright, D. W., and Hausbeck, M. K. 2009. Susceptibility of Fraser fir to Phytophthora capsici. Plant Dis. 93:135-141.
-
(2009)
Plant Dis
, vol.93
, pp. 135-141
-
-
Quesada-Ocampo, L.M.1
Fulbright, D.W.2
Hausbeck, M.K.3
-
38
-
-
80051771543
-
Investigating the genetic structure of Phytophthora capsici populations
-
Quesada-Ocampo, L. M., Granke, L. L., Mercier, M. R., Olsen, J., and Hausbeck, M. K. 2011. Investigating the genetic structure of Phytophthora capsici populations. Phytopathology 101:1061-1073.
-
(2011)
Phytopathology
, vol.101
, pp. 1061-1073
-
-
Quesada-Ocampo, L.M.1
Granke, L.L.2
Mercier, M.R.3
Olsen, J.4
Hausbeck, M.K.5
-
39
-
-
5344244656
-
-
R-Development-Core-Team, R Foundation for Statistical Computing, Vienna, Austria
-
R-Development-Core-Team. 2008. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2008)
R: A Language and Environment For Statistical Computing
-
-
-
40
-
-
0027134395
-
Spatial and temporal dynamics of Phytophthora epidemics in commercial bell pepper fields
-
Ristaino, J. B., Larkin, R. P., and Campbell, C. L. 1993. Spatial and temporal dynamics of Phytophthora epidemics in commercial bell pepper fields. Phytopathology 83:1312-1320.
-
(1993)
Phytopathology
, vol.83
, pp. 1312-1320
-
-
Ristaino, J.B.1
Larkin, R.P.2
Campbell, C.L.3
-
41
-
-
19544365873
-
Survival and recovery of Phytophthora capsici and oomycetes in tailwater and soil from vegetable fields in Florida
-
Roberts, P. D., French-Monar, R. D., Hoffine, M. S., Seijo, T. E., and McGovern, R. J. 2005. Survival and recovery of Phytophthora capsici and oomycetes in tailwater and soil from vegetable fields in Florida. Ann. Appl. Biol. 146:351-359.
-
(2005)
Ann. Appl. Biol
, vol.146
, pp. 351-359
-
-
Roberts, P.D.1
French-Monar, R.D.2
Hoffine, M.S.3
Seijo, T.E.4
McGovern, R.J.5
-
42
-
-
33750437374
-
Clines, clusters, and the effect of study design on the inference of human population structure
-
Rosenberg, N. A., Mahajan, S., Ramachandran, S., Zhao, C., Pritchard, J. K., and Feldman, M. W. 2005. Clines, clusters, and the effect of study design on the inference of human population structure. PLoS Genet 1:e70.
-
(2005)
PLoS Genet
, vol.1
-
-
Rosenberg, N.A.1
Mahajan, S.2
Ramachandran, S.3
Zhao, C.4
Pritchard, J.K.5
Feldman, M.W.6
-
43
-
-
0033793521
-
Consequences of recombination on traditional phylogenetic analysis
-
Schierup, M. H., and Hein, J. 2000. Consequences of recombination on traditional phylogenetic analysis. Genetics 156:879-891.
-
(2000)
Genetics
, vol.156
, pp. 879-891
-
-
Schierup, M.H.1
Hein, J.2
-
44
-
-
0001351452
-
Occurrence, dissemination, and survival of plant pathogens in surface irrigation ponds in southern Georgia
-
Shokes, F. M., and McCarter, S. M. 1979. Occurrence, dissemination, and survival of plant pathogens in surface irrigation ponds in southern Georgia. Phytopathology 69:510-516.
-
(1979)
Phytopathology
, vol.69
, pp. 510-516
-
-
Shokes, F.M.1
McCarter, S.M.2
-
45
-
-
0029915539
-
Control of root rot of peppers caused by Phytophthora capsici with a nonionic surfactant
-
Stanghellini, M. E., Kim, D. H., Rasmussen, S. L., and Rorabough, P. A. 1996. Control of root rot of peppers caused by Phytophthora capsici with a nonionic surfactant. Plant Dis. 80:1113-1116.
-
(1996)
Plant Dis
, vol.80
, pp. 1113-1116
-
-
Stanghellini, M.E.1
Kim, D.H.2
Rasmussen, S.L.3
Rorabough, P.A.4
-
46
-
-
0035071957
-
A new statistical method for haplotype reconstruction from population data
-
Stephens, M., Smith, N. J., and Donnelly, P. 2001. A new statistical method for haplotype reconstruction from population data. Am. J. Hum. Genet. 68:978-989.
-
(2001)
Am. J. Hum. Genet
, vol.68
, pp. 978-989
-
-
Stephens, M.1
Smith, N.J.2
Donnelly, P.3
-
47
-
-
69449086016
-
Development of an improved isolation approach and simple sequence repeat markers to characterize Phytophthora capsici populations in irrigation ponds in southern Georgia
-
Wang, Z., Langston, D. B., Csinos, A. S., Gitaitis, R. D., Walcott, R. R., and Ji, P. 2009. Development of an improved isolation approach and simple sequence repeat markers to characterize Phytophthora capsici populations in irrigation ponds in southern Georgia. Appl. Environ. Microbiol. 75:5467-5473.
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 5467-5473
-
-
Wang, Z.1
Langston, D.B.2
Csinos, A.S.3
Gitaitis, R.D.4
Walcott, R.R.5
Ji, P.6
-
49
-
-
0036828309
-
Occurrence and identification of Phytophthora spp. pathogenic to pear fruit in irrigation water in the Wenatchee River Valley of Washington State
-
Yamak, F., Peever, T. L., Grove, G. G., and Boal, R. J. 2002. Occurrence and identification of Phytophthora spp. pathogenic to pear fruit in irrigation water in the Wenatchee River Valley of Washington State. Phytopathology 92:1210-1217.
-
(2002)
Phytopathology
, vol.92
, pp. 1210-1217
-
-
Yamak, F.1
Peever, T.L.2
Grove, G.G.3
Boal, R.J.4
-
50
-
-
0036309214
-
Local adaptation and effect of host genotype on the rate of pathogen evolution: An experimental test in a plant pathosystem
-
Zhan, J., Mundt, C. C., Hoffer, M. E., and McDonald, B. A. 2002. Local adaptation and effect of host genotype on the rate of pathogen evolution: An experimental test in a plant pathosystem. J. Evol. Biol. 15:634-647.
-
(2002)
J. Evol. Biol
, vol.15
, pp. 634-647
-
-
Zhan, J.1
Mundt, C.C.2
Hoffer, M.E.3
McDonald, B.A.4
-
51
-
-
33750959346
-
Molecular detection of Phytophthora capsici in infected plant tissues, soil and water
-
Zhang, Z. G., Li, Y. Q., Fan, H., Wang, Y. C., and Zheng, X. B. 2006. Molecular detection of Phytophthora capsici in infected plant tissues, soil and water. Plant Pathol. 55:770-775.
-
(2006)
Plant Pathol
, vol.55
, pp. 770-775
-
-
Zhang, Z.G.1
Li, Y.Q.2
Fan, H.3
Wang, Y.C.4
Zheng, X.B.5
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