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Volumn 5, Issue , 2007, Pages 277-286

Algorithm engineering for color-coding to facilitate signaling pathway detection

Author keywords

[No Author keywords available]

Indexed keywords

BIOINFORMATICS; CODES (SYMBOLS); COMPUTATIONAL COMPLEXITY; PROTEINS;

EID: 84857000598     PISSN: 17516404     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1142/9781860947995_0030     Document Type: Conference Paper
Times cited : (10)

References (13)
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    • Alon, N.1    Yuster, R.2    Zwick, U.3
  • 2
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    • Gaining confidence in high-throughput protein interaction networks
    • J. S. Bader, A. Chaudhuri, J. M. Rothberg, and J. Chant. Gaining confidence in high-throughput protein interaction networks. Nature Biotech., 22(1):78-85, 2004.
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  • 6
    • 10744226222 scopus 로고    scopus 로고
    • Computational discovery of gene modules and regulatory networks
    • G. K. Gerber, Z.-B. Joseph, T. I. Lee, et al. Computational discovery of gene modules and regulatory networks. Nature Biotech., 21(11):1337-1342, 2003.
    • (2003) Nature Biotech. , vol.21 , Issue.11 , pp. 1337-1342
    • Gerber, G.K.1    Joseph, Z.-B.2    Lee, T.I.3
  • 7
    • 0345600247 scopus 로고    scopus 로고
    • A protein interaction map of Drosophila melanogaster
    • L. Giot, J. S. Bader, C. Brouwer, et al. A protein interaction map of Drosophila melanogaster. Science, 302(5651):1727-1736, 2003.
    • (2003) Science , vol.302 , Issue.5651 , pp. 1727-1736
    • Giot, L.1    Bader, J.S.2    Brouwer, C.3
  • 8
    • 0035805255 scopus 로고    scopus 로고
    • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
    • T. Ideker, V. Thorsson, J. A. Ranish, et al. Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science, 292(5518):929-934, 2001.
    • (2001) Science , vol.292 , Issue.5518 , pp. 929-934
    • Ideker, T.1    Thorsson, V.2    Ranish, J.A.3
  • 9
    • 0035836765 scopus 로고    scopus 로고
    • A comprehensive two-hybrid analysis to explore the yeast protein interactome
    • T. Ito, T. Chiba, R. Ozawa, et al. A comprehensive two-hybrid analysis to explore the yeast protein interactome. PNAS, 98(8):4569-4574, 2001.
    • (2001) PNAS , vol.98 , Issue.8 , pp. 4569-4574
    • Ito, T.1    Chiba, T.2    Ozawa, R.3
  • 10
    • 33645983211 scopus 로고    scopus 로고
    • Efficient algorithms for detecting signaling pathways in protein interaction networks
    • Preliminary version appeared in Proc. RECOMB'05
    • J. Scott, T. Ideker, R. M. Karp, and R. Sharan. Efficient algorithms for detecting signaling pathways in protein interaction networks. J. Comp. Biol., 13(2):133-144, 2006. Preliminary version appeared in Proc. RECOMB'05.
    • (2006) J. Comp. Biol. , vol.13 , Issue.2 , pp. 133-144
    • Scott, J.1    Ideker, T.2    Karp, R.M.3    Sharan, R.4
  • 11
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    • QPath: A method for querying pathways in a protein-protein interaction network
    • T. Shlomi, D. Segal, E. Ruppin, and R. Sharan. QPath: a method for querying pathways in a protein-protein interaction network. BMC Bioinformatics, 7:199, 2006.
    • (2006) BMC Bioinformatics , vol.7 , pp. 199
    • Shlomi, T.1    Segal, D.2    Ruppin, E.3    Sharan, R.4
  • 13
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    • Random networks with tunable degree distribution and clustering
    • E. Volz. Random networks with tunable degree distribution and clustering. Phys. Rev. E, 70:056115, 2004.
    • (2004) Phys. Rev. e , vol.70 , pp. 056115
    • Volz, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.