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Volumn 29, Issue 2, 2012, Pages 349-360

A survey of natural and ethyl methane sulfonate-induced variations of eIF4E using high-resolution melting analysis in Capsicum

Author keywords

Allele mining; Capsicum; EMS; HRM; Mutant screening

Indexed keywords

DNA SEQUENCES; MELTING; METHANE;

EID: 84856728906     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-011-9550-5     Document Type: Article
Times cited : (30)

References (39)
  • 1
    • 67249165870 scopus 로고    scopus 로고
    • Unlocking wheat genetic resources for the molecular identification of previously undescribed functional alleles at the Pm3 resistance locus
    • Bhullar NK, Street K, Mackay M, Yahiaoui N, Keller B (2009) Unlocking wheat genetic resources for the molecular identification of previously undescribed functional alleles at the Pm3 resistance locus. Proc Natl Acad Sci USA 106: 9519-9524.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 9519-9524
    • Bhullar, N.K.1    Street, K.2    Mackay, M.3    Yahiaoui, N.4    Keller, B.5
  • 2
    • 5144232519 scopus 로고    scopus 로고
    • A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.)
    • Caldwell DG, McCallum N, Shaw P, Muehlbauer GJ, Marshall DF, Waugh R (2004) A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.). Plant J 40: 143-150.
    • (2004) Plant J , vol.40 , pp. 143-150
    • Caldwell, D.G.1    McCallum, N.2    Shaw, P.3    Muehlbauer, G.J.4    Marshall, D.F.5    Waugh, R.6
  • 4
    • 40949083511 scopus 로고    scopus 로고
    • Natural variation and functional analyses provide evidence for co-evolution between plant eIF4E and potyviral VPg
    • Charron C, Nicolai M, Gallois JL, Robaglia C, Moury B, Palloix A, Caranta C (2008) Natural variation and functional analyses provide evidence for co-evolution between plant eIF4E and potyviral VPg. Plant J 54: 56-68.
    • (2008) Plant J , vol.54 , pp. 56-68
    • Charron, C.1    Nicolai, M.2    Gallois, J.L.3    Robaglia, C.4    Moury, B.5    Palloix, A.6    Caranta, C.7
  • 5
    • 54049154729 scopus 로고    scopus 로고
    • High-resolution melt analysis to identify and map sequence-tagged site anchor points onto linkage maps: a white lupin (Lupinus albus) map as an exemplar
    • Croxford AE, Rogers T, Caligari PD, Wilkinson MJ (2008) High-resolution melt analysis to identify and map sequence-tagged site anchor points onto linkage maps: a white lupin (Lupinus albus) map as an exemplar. New Phytol 180: 594-607.
    • (2008) New Phytol , vol.180 , pp. 594-607
    • Croxford, A.E.1    Rogers, T.2    Caligari, P.D.3    Wilkinson, M.J.4
  • 6
    • 73449109860 scopus 로고    scopus 로고
    • Simultaneous mutation detection of three homoeologous genes in wheat by high resolution melting analysis and mutation surveyor
    • Dong C, Vincent K, Sharp P (2009) Simultaneous mutation detection of three homoeologous genes in wheat by high resolution melting analysis and mutation surveyor. BMC Plant Biol 9: 143-154.
    • (2009) BMC Plant Biol , vol.9 , pp. 143-154
    • Dong, C.1    Vincent, K.2    Sharp, P.3
  • 7
    • 70350263714 scopus 로고    scopus 로고
    • Implementation of two high through-put techniques in a novel application: detecting point mutations in large EMS mutated plant populations
    • Gady AL, Hermans FW, van de Wal MH, van Loo EN, Visser RG, Bachem CW (2009) Implementation of two high through-put techniques in a novel application: detecting point mutations in large EMS mutated plant populations. Plant Meth 5: 13-26.
    • (2009) Plant Meth , vol.5 , pp. 13-26
    • Gady, A.L.1    Hermans, F.W.2    van de Wal, M.H.3    van Loo, E.N.4    Visser, R.G.5    Bachem, C.W.6
  • 8
    • 4344668733 scopus 로고    scopus 로고
    • Identification of markers tightly linked to sbm recessive genes for resistance to Pea seed-borne mosaic virus
    • Gao Z, Eyers S, Thomas C, Ellis N, Maule A (2004) Identification of markers tightly linked to sbm recessive genes for resistance to Pea seed-borne mosaic virus. Theor Appl Genet 109: 488-494.
    • (2004) Theor Appl Genet , vol.109 , pp. 488-494
    • Gao, Z.1    Eyers, S.2    Thomas, C.3    Ellis, N.4    Maule, A.5
  • 11
    • 69249217777 scopus 로고    scopus 로고
    • High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley
    • Hofinger BJ, Jing HC, Hammond-Kosack KE, Kanyuka K (2009) High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley. Theor Appl Genet 119: 851-865.
    • (2009) Theor Appl Genet , vol.119 , pp. 851-865
    • Hofinger, B.J.1    Jing, H.C.2    Hammond-Kosack, K.E.3    Kanyuka, K.4
  • 12
    • 70349333035 scopus 로고    scopus 로고
    • Double mutations in eIF4E and eIFiso4E confer recessive resistance to Chilli veinal mottle virus in pepper
    • Hwang J, Li J, Liu WY, An SJ, Cho H, Her NH, Yeam I, Kim D, Kang BC (2009) Double mutations in eIF4E and eIFiso4E confer recessive resistance to Chilli veinal mottle virus in pepper. Mol Cell 27: 329-336.
    • (2009) Mol Cell , vol.27 , pp. 329-336
    • Hwang, J.1    Li, J.2    Liu, W.Y.3    An, S.J.4    Cho, H.5    Her, N.H.6    Yeam, I.7    Kim, D.8    Kang, B.C.9
  • 13
    • 78650382446 scopus 로고    scopus 로고
    • Identification of Capsicum species using SNP markers based on high resolution melting analysis
    • Jeong HJ, Jo YD, Park SW, Kang BC (2010) Identification of Capsicum species using SNP markers based on high resolution melting analysis. Genome 53: 1029-1040.
    • (2010) Genome , vol.53 , pp. 1029-1040
    • Jeong, H.J.1    Jo, Y.D.2    Park, S.W.3    Kang, B.C.4
  • 14
    • 45849109591 scopus 로고    scopus 로고
    • Gene banks pay big dividends to agriculture, the environment, and human welfare
    • Johnson RC (2008) Gene banks pay big dividends to agriculture, the environment, and human welfare. PLoS Biol 6: e148.
    • (2008) PLoS Biol , vol.6
    • Johnson, R.C.1
  • 15
    • 18844430234 scopus 로고    scopus 로고
    • The pvr1 locus in Capsicum encodes a translation initiation factor eIF4E that interacts with Tobacco etch virus VPg
    • Kang BC, Yeam I, Frantz JD, Murphy JF, Jahn MM (2005) The pvr1 locus in Capsicum encodes a translation initiation factor eIF4E that interacts with Tobacco etch virus VPg. Plant J 42: 392-405.
    • (2005) Plant J , vol.42 , pp. 392-405
    • Kang, B.C.1    Yeam, I.2    Frantz, J.D.3    Murphy, J.F.4    Jahn, M.M.5
  • 17
    • 50249161491 scopus 로고    scopus 로고
    • The use of high resolution melting (HRM) to map single nucleotide polymorphism markers linked to a covered smut resistance gene in barley
    • Lehmensiek A, Sutherland MW, McNamara RB (2008) The use of high resolution melting (HRM) to map single nucleotide polymorphism markers linked to a covered smut resistance gene in barley. Theor Appl Genet 117: 721-728.
    • (2008) Theor Appl Genet , vol.117 , pp. 721-728
    • Lehmensiek, A.1    Sutherland, M.W.2    McNamara, R.B.3
  • 18
    • 44449150364 scopus 로고    scopus 로고
    • A new approach to varietal identification in plants by microsatellite high resolution melting analysis: application to the verification of grapevine and olive cultivars
    • Mackay JF, Wright CD, Bonfiglioli RG (2008) A new approach to varietal identification in plants by microsatellite high resolution melting analysis: application to the verification of grapevine and olive cultivars. Plant Meth 4: 8-17.
    • (2008) Plant Meth , vol.4 , pp. 8-17
    • Mackay, J.F.1    Wright, C.D.2    Bonfiglioli, R.G.3
  • 19
    • 2542543618 scopus 로고    scopus 로고
    • In silico screening of a saturated mutation library of tomato
    • Menda N, Semel Y, Peled D, Eshed Y, Zamir D (2004) In silico screening of a saturated mutation library of tomato. Plant J 38: 861-872.
    • (2004) Plant J , vol.38 , pp. 861-872
    • Menda, N.1    Semel, Y.2    Peled, D.3    Eshed, Y.4    Zamir, D.5
  • 22
    • 65349139457 scopus 로고    scopus 로고
    • Mutation scanning and genotyping by high-resolution DNA melting analysis in olive germplasm
    • Muleo R, Colao MC, Miano D, Cirilli M, Intrieri MC, Baldoni L, Rugini E (2009) Mutation scanning and genotyping by high-resolution DNA melting analysis in olive germplasm. Genome 52: 252-260.
    • (2009) Genome , vol.52 , pp. 252-260
    • Muleo, R.1    Colao, M.C.2    Miano, D.3    Cirilli, M.4    Intrieri, M.C.5    Baldoni, L.6    Rugini, E.7
  • 23
    • 77955176554 scopus 로고    scopus 로고
    • Optimization of high resolution melting analysis and discovery of single nucleotide polymorphism in Capsicum
    • Park SW, An SJ, Yang HB, Kwon JK, Kang BC (2009) Optimization of high resolution melting analysis and discovery of single nucleotide polymorphism in Capsicum. Hort Environ Biotechnol 50: 31-39.
    • (2009) Hort Environ Biotechnol , vol.50 , pp. 31-39
    • Park, S.W.1    An, S.J.2    Yang, H.B.3    Kwon, J.K.4    Kang, B.C.5
  • 24
    • 4644245816 scopus 로고    scopus 로고
    • Sensitivity and specificity of single-nucleotide polymorphism scanning by high-resolution melting analysis
    • Reed GH, Wittwer CT (2004) Sensitivity and specificity of single-nucleotide polymorphism scanning by high-resolution melting analysis. Clin Chem 50: 1748-1754.
    • (2004) Clin Chem , vol.50 , pp. 1748-1754
    • Reed, G.H.1    Wittwer, C.T.2
  • 25
    • 70350440330 scopus 로고    scopus 로고
    • Allele mining in the pepper gene pool provided new complementation effects between pvr2-eIF4E and pvr6-eIF(iso)4E alleles for resistance to pepper veinal mottle virus
    • Rubio M, Nicolai M, Caranta C, Palloix A (2009) Allele mining in the pepper gene pool provided new complementation effects between pvr2-eIF4E and pvr6-eIF(iso)4E alleles for resistance to pepper veinal mottle virus. J Gen Virol 90: 2808-2814.
    • (2009) J Gen Virol , vol.90 , pp. 2808-2814
    • Rubio, M.1    Nicolai, M.2    Caranta, C.3    Palloix, A.4
  • 27
    • 0030880972 scopus 로고    scopus 로고
    • Seed banks and molecular maps: unlocking genetic potential from the wild
    • Tanksley SD, McCouch SR (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277: 1063-1066.
    • (1997) Science , vol.277 , pp. 1063-1066
    • Tanksley, S.D.1    McCouch, S.R.2
  • 30
    • 55049095469 scopus 로고    scopus 로고
    • Control of rice grain-filling and yield by a gene with a potential signature of domestication
    • Wang E, Wang J, Zhu X, Hao W, Wang L, Li Q, Zhang L, He W, Lu B, Lin H (2008a) Control of rice grain-filling and yield by a gene with a potential signature of domestication. Nat Genet 40: 1370-1374.
    • (2008) Nat Genet , vol.40 , pp. 1370-1374
    • Wang, E.1    Wang, J.2    Zhu, X.3    Hao, W.4    Wang, L.5    Li, Q.6    Zhang, L.7    He, W.8    Lu, B.9    Lin, H.10
  • 32
    • 55649113792 scopus 로고    scopus 로고
    • A functional genomics resource for Brassica napus: development of an EMS mutagenized population and discovery of FAE1 point mutations by TILLING
    • Wang N, Wang Y, Tian F, King GJ, Zhang C, Long Y, Shi L, Meng J (2008c) A functional genomics resource for Brassica napus: development of an EMS mutagenized population and discovery of FAE1 point mutations by TILLING. New Phytol 180: 751-765.
    • (2008) New Phytol , vol.180 , pp. 751-765
    • Wang, N.1    Wang, Y.2    Tian, F.3    King, G.J.4    Zhang, C.5    Long, Y.6    Shi, L.7    Meng, J.8
  • 37
    • 28444485990 scopus 로고    scopus 로고
    • Allele-specific CAPS markers based on point mutations in resistance alleles at the pvr1 locus encoding eIF4E in Capsicum
    • Yeam I, Kang BC, Lindeman W, Frantz JD, Faber N, Jahn MM (2005) Allele-specific CAPS markers based on point mutations in resistance alleles at the pvr1 locus encoding eIF4E in Capsicum. Theor Appl Genet 112: 178-186.
    • (2005) Theor Appl Genet , vol.112 , pp. 178-186
    • Yeam, I.1    Kang, B.C.2    Lindeman, W.3    Frantz, J.D.4    Faber, N.5    Jahn, M.M.6
  • 38
    • 35748964446 scopus 로고    scopus 로고
    • Functional dissection of naturally occurring amino acid substitutions in eIF4E that confers recessive potyvirus resistance in plants
    • Yeam I, Cavatorta JR, Ripoll DR, Kang BC, Jahn MM (2007) Functional dissection of naturally occurring amino acid substitutions in eIF4E that confers recessive potyvirus resistance in plants. Plant Cell 19: 2913-2928.
    • (2007) Plant Cell , vol.19 , pp. 2913-2928
    • Yeam, I.1    Cavatorta, J.R.2    Ripoll, D.R.3    Kang, B.C.4    Jahn, M.M.5
  • 39
    • 46849103383 scopus 로고    scopus 로고
    • New Fusarium head blight-resistant sources from Asian wheat germplasm
    • Yu JB, Bai GH, Cai SB, Dong YH, Ban T (2008) New Fusarium head blight-resistant sources from Asian wheat germplasm. Crop Sci 48: 1090-1097.
    • (2008) Crop Sci , vol.48 , pp. 1090-1097
    • Yu, J.B.1    Bai, G.H.2    Cai, S.B.3    Dong, Y.H.4    Ban, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.