Spectral model of depth-integrated water column photosynthesis and its inhibition by ultraviolet radiation

Global Biogeochemical Cycles

Volumn 26, Issue 1, 2012, Pages

  Cullen, John J ^a   Davis, Richard F ^a   Huot, Yannick ^b  

^a DALHOUSIE UNIVERSITY   (Canada)

^b UNIVERSITÉ DE SHERBROOKE   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL EFFECTS; BIOLOGICAL PROPERTIES; CHLOROPHYLL CONCENTRATION; GLOBAL OCEAN; NUMERICAL MODELS; OZONE DEPLETION; PER UNIT; PHOTOSYNTHETICALLY AVAILABLE RADIATIONS; PRIMARY PRODUCTION; SOLAR ANGLE; SPECTRAL EFFECTS; SPECTRAL MODELS; STRATOSPHERIC OZONE; SURFACE CHLOROPHYLL; SURFACE IRRADIANCE; WATER CLARITY; WATER COLUMNS; WATER TRANSPARENCY; WATER TYPES;

CHLOROPHYLL; CLIMATE CHANGE; CLIMATE MODELS; INTEGRATION; NUMERICAL METHODS; OZONE; OZONE LAYER; PRODUCTIVITY; RADIATION EFFECTS; REMOTE SENSING; SCALES (WEIGHING INSTRUMENTS); SUN; TRANSPARENCY; ULTRAVIOLET RADIATION; WATER ABSORPTION;

PHOTOSYNTHESIS;

CHLOROPHYLL; INHIBITION; IRRADIANCE; LAKE ECOSYSTEM; MARINE ECOSYSTEM; NUMERICAL MODEL; PHOTOSYNTHESIS; PHOTOSYNTHETICALLY ACTIVE RADIATION; PRIMARY PRODUCTION; SPECTRAL ANALYSIS; ULTRAVIOLET RADIATION; WATER COLUMN;

EID: 84856507966     PISSN: 08866236     EISSN: None     Source Type: Journal    
DOI: 10.1029/2010GB003914     Document Type: Article

References (71)

1. Allali, K., A. Bricaud, and H. Claustre (1997), Spatial variations in the chlorophyll-specific absorption coefficients of phytoplankton and photosynthetically active pigments in the equatorial Pacific, J. Geo-phys. Res., 102, 12,413-12,423, doi:10.1029/97JC00380. (Pubitemid 27502435)
2. Anderson, T. R. (1993), A spectrally averaged model of light penetration and photosynthesis, Limnol. Oceanogr., 38, 1403-1419, doi:10.4319/lo.1993.38.7. 1403.
3. Arrigo, K. R. (1994), Impact of ozone depletion on phytoplankton growth in the Southern Ocean: Large-scale spatial and temporal variability, Mar. Ecol. Prog. Ser., 114, 1-12, doi:10.3354/meps114001.
4. Arrigo, K. R., and C. W. Brown (1996), Impact of chromophoric dissolved organic matter on UV inhibition of primary productivity in the sea, Mar. Ecol. Prog. Ser., 140, 207-216, doi:10.3354/meps140207.
5. Baker, K. S., and R. C. Smith (1982), Bio-optical classification and model of natural waters. 2, Limnol. Oceanogr., 27, 500-509, doi:10.4319/lo.1982. 27.3.0500.
6. Banse, K. (2004), Should we continue to use the 1% light depth convention for estimating the compensation depth of phytoplankton for another 70 years? Limnol. Oceanogr. Bull, 13, 49-52.
7. Beardall, J., C. Sobrino, and S. Stojkovic (2009), Interactions between the impacts of ultraviolet radiation, elevated CO2, and nutrient limitation on marine primary producers, Photochem. Photobiol. Sci., 8, 1257-1265, doi:10.1039/b9pp00034h.
8. Behrenfeld, M. J., and P. G. Falkowski (1997a), A consumer's guide to phytoplankton primary productivity models, Limnol. Oceanogr., 42, 1479-1491, doi:10.4319/lo.1997.42.7.1479. (Pubitemid 28181000)
9. Behrenfeld, M. J., and P. G. Falkowski (1997b), Photosynthetic rates derived from satellite-based chlorophyll concentration, Limnol. Oceanogr., 42, 1-20, doi:10.4319/lo.1997.42.1.0001. (Pubitemid 27422607)
10. Bélanger, S., M. Babin, and P. Larouche (2008), An empirical ocean color algorithm for estimating the contribution of chromophoric dissolved organic matter to total light absorption in optically complex waters, J. Geophys. Res., 113, C04027, doi:10.1029/2007JC004436.
11. Bricaud, A., H. Claustre, J. Ras, and K. Oubelkheir (2004), Natural variability of phytoplanktonic absorption in oceanic waters: Influence of the size structure of algal populations, J. Geophys. Res., 109, C11010, doi:10.1029/2004JC002419.
12. Ciotti, Á. M., M. R. Lewis, and J. J. Cullen (2002), Assessment of the relationships between dominant cell size in natural phytoplankton communities and the spectral shape of the absorption coefficient, Limnol. Oceanogr., 47, 404-417, doi:10.4319/lo.2002.47.2.0404. (Pubitemid 34290308)
13. Cockell, C. S. (2000), Ultraviolet radiation and the photobiology of Earth's early oceans, Origins Life Evol. Biosphere, 30, 467-500, doi:10.1023/A:1006765405786.
14. Cullen, J. J. (2001), Plankton: Primary production methods, in Encyclopedia of Ocean Sciences, edited by J. Steele et al., pp. 2277-2284, Academic, San Diego, Calif, doi:10.1006/rwos.2001.0203.
15. Cullen, J. J., and M. P. Lesser (1991), Inhibition of photosynthesis by ultraviolet radiation as a function of dose and dosage rate: Results for a marine diatom, Mar. Biol. Berlin, 111, 183-190, doi:10.1007/BF01319699.
16. Cullen, J. J., and P. J. Neale (1993), Quantifying the effects of ultraviolet radiation on aquatic photosynthesis, in Photosynthetic Responses to the Environment, edited by H. Yamamoto and C. M. Smith, pp. 45-60, Am. Soc. of Plant Physiol., Washington, D. C.
17. Cullen, J. J., P. J. Neale, and M. P. Lesser (1992), Biological weighting function for the inhibition of phytoplankton photosynthesis by ultraviolet radiation, Science, 258, 646-650, doi:10.1126/science.258.5082.646.
18. Cullen, J. J., W. F. Doolittle, S. A. Levin, and W. K. W. Li (2007), Patterns and prediction in microbial oceanography, Oceanogr. Mag., 20, 32-44.
19. Falkowski, P. G., R. Barber, and V. Smetacek (1998), Biogeochemical controls and feedbacks on ocean primary production, Science, 281, 200-206, doi:10.1126/science.281.5374.200. (Pubitemid 28334494)
20. Friedrichs, M. A. M., et al. (2009), Assessing the uncertainties of model estimates of primary productivity in the tropical Pacific Ocean, J. Mar. Syst, 76, 113-133, doi:10.1016/j.jmarsys.2008.05.010.
21. Fritz, J. J., P. J. Neale, R. F. Davis, and J. A. Peloquin (2008), Response of Antarctic phytoplankton to solar UVR exposure: Inhibition and recovery of photosynthesis in coastal and pelagic assemblages, Mar. Ecol. Prog. Ser., 365, 1-16, doi:10.3354/meps07610.
22. Gibson, J. A. E., W. F. Vincent, B. Nieke, and R. Pienitz (2000), Control of biological exposure to UV radiation in the Arctic Ocean: Comparison of the roles of ozone andriverine dissolved organic matter, Arctic, 53,372-382. (Pubitemid 32111101)
23. Gregg, W. W., and K. L. Carder (1990), A simple spectral solar irradiance model for cloudless maritime atmospheres, Limnol. Oceanogr., 35, 1657-1675, doi:10.4319/lo.1990.35.8.1657.
24. Harrison, W. G., T. Platt, and M. R. Lewis (1985), The utility of light-saturation models for estimating marine primary productivity in the field: A comparison with conventional "simulated" in situ methods, Can. J. Fish. Aquat. Sci., 42, 864-872, doi:10.1139/f85-110.
25. Johnson, G., B. B. Prézelin, and R. V. M. Jovine (1997), Fluorescence excitation spectra and light utilization in two red tide dinoflagellates, Limnol. Oceanogr., 42, 1166-1177, doi:10.4319/lo.1997.42.5- part-2.1166.
26. Kyewalyanga, M., T. Platt, and S. Sathyendranath (1992), Ocean primary production calculated by spectral and broad-band models, Mar. Ecol. Prog. Ser., 85, 171-185, doi:10.3354/meps085171. (Pubitemid 23403212)
27. Laws, E. A., R. D. Giacomo, K. L. Carder, R. B. Peter, and S. Hawes (1990), Primary production in the deep blue sea, Deep Sea Res., 37, 715-730, doi:10.1016/0198-0149(90)90001-C.
28. Lee, Z. P. (2008), KPAR: An optical property associated with ambiguous values, J. Lake Sci., 21, 159-164.
29. Lee, Z., K. L. Carder, and R. A. Arnone (2002), Deriving inherent optical properties from water color: A multiband quasi-analytical algorithm for optically deep waters, Appl. Opt., 41, 5755-5772, doi:10.1364/AO.41.005755.
30. Legendre, L., and J. Le Fèvre (1989), Hydrodynamic singularities as controls of recycled versus export production in oceans, in Productivity of the Ocean: Present and Past, edited by W. H. Berger et al., pp. 49-63, John Wiley, New York.
31. Lehmann, M. K., R. F. Davis, Y. Huot, and J. J. Cullen (2004), Spectrally weighted transparency in models of water-column photosynthesis and its inhibition by ultraviolet radiation, Mar. Ecol. Prog. Ser., 269, 101-110, doi:10.3354/meps269101. (Pubitemid 38492582)
32. Lutz, V. A., S. Sathyendranath, E. J. H. Head, and W. K. W. Li (1998), Differences between in vivo absorption and fluorescence excitation spectra in natural samples of phytoplankton, J. Phycol., 34, 214-227, doi:10.1046/j.1529- 8817.1998.340214.x. (Pubitemid 28209513)
33. Manizza, M., C. Le Quéré, A. J. Watson, and E. T. Buitenhuis (2008), Ocean biogeochemical response to phytoplankton-light feedback in a global model, J. Geophys. Res., 113, C10010, doi:10.1029/2007JC004478.
34. Maritorena, S., D. A. Siegel, and A. R. Peterson (2002), Optimization of a semianalytical ocean color model for global-scale applications, Appl. Opt., 41, 2705-2714, doi:10.1364/AO.41.002705. (Pubitemid 34771729)
35. Markager, S., and W. F. Vincent (2001), Light absorption by phytoplankton: Development of a matching parameter for algal photosynthesis under different spectral regimes, J. Plankton Res., 23, 1373-1384, doi:10.1093/plankt/23.12.1373. (Pubitemid 34034393)
36. Marra, J. (2002), Approaches to the measurement of plankton production, in Phytoplankton Productivity: Carbon Assimilation in Marine and Freshwater Ecosystems, edited by P. J. B. Williams et al., pp. 78-108, Blackwell, Oxford.
37. Martinez, E., D. Antoine, F. D'Ortenzio, and B. Gentili (2009), Climate-driven basin-scale decadal oscillations of oceanic phytoplankton, Science, 326, 1253-1256, doi:10.1126/science.1177012.
38. Morel, A. (1978), Available, usable, and stored radiant energy in relation to marine photosynthesis, Deep Sea Res., 25, 673-688, doi:10.1016/0146-6291(78)90623-9. (Pubitemid 9400732)
39. Morel, A. (1991), Light and marine photosynthesis: A spectral model with geochemical and climatological implications, Prog. Oceanogr., 26, 263-306, doi:10.1016/0079-6611(91)90004-6.
40. Morel, A., and L. Prieur (1977), Analysis of variations in ocean color, Limnol. Oceanogr., 22, 709-722, doi:10.4319/lo.1977.22.4.0709.
41. Morel, A., B. Gentili, M. Chami, and J. Ras (2006), Bio-optical properties of high chlorophyll Case 1 waters, and of yellow-substance-dominated Case 2 waters, Deep Sea Res., Part I, 53, 1439-1459, doi:10.1016/j. dsr.2006.07.007. (Pubitemid 44485527)
42. Morel, A., Y. Huot, B. Gentili, P. J. Werdell, S. B. Hooker, and B. A. Franz (2007), Examining the consistency of products derived from various ocean color sensors in open ocean (Case 1) waters in the perspective of a multi-sensor approach, Remote Sens. Environ., 111, 69-88, doi:10.1016/j.rse.2007.03.012. (Pubitemid 47449704)
43. Neale, P. J. (2000), Spectral weighting functions for quantifying effects of UV radiation in marine systems, in The Effects of UV Radiation in the Marine Environment, edited by S. de Mora et al., pp. 72-100, Cambridge Univ. Press, Cambridge, U. K., doi:10.1017/CBO9780511535444.004.
44. Neale, P. J. (2001), Modeling the effects of ultraviolet radiation on estuarine phytoplankton production: Impact of variations in exposure and sensitivity to inhibition, J. Photochem. Photobiol. B, 62, 1-8, doi:10.1016/S1011-1344(01)00159-2. (Pubitemid 32851311)
45. Neale, P. J., M. P. Lesser, and J. J. Cullen (1994), Effects of ultraviolet radiation on the photosynthesis of phytoplankton in the vicinity of McMurdo Station, Antarctica (78°S), in Ultraviolet Radiation in Antarctica: Measurements and Biological Effects, Antarct. Res. Ser., vol. 62, edited by C. S. Weiler and P. A. Penhale, pp. 125-142, AGU, Washington, D. C., doi:10.1029/AR062p0125.
46. Neale, P. J., A. T. Banaszak, and C. R. Jarriel (1998a), Ultraviolet sunscreens in Gymnodinium sanguineum (Dinophyceae): Mycosporine-like amino acids protect against inhibition of photosynthesis, J. Phycol., 34, 928-938, doi:10.1046/j.1529-8817.1998.340928.x. (Pubitemid 29032829)
47. Neale, P. J., J. J. Cullen, and R. F. Davis (1998b), Inhibition of marine photosynthesis by ultraviolet radiation: Variable sensitivity of phytoplankton in the Weddell-Scotia Sea during austral spring, Limnol. Oceanogr., 43, 433-448, doi:10.4319/lo.1998.43.3.0433. (Pubitemid 28290359)
48. Neale, P. J., R. F. Davis, and J. J. Cullen (1998c), Interactive effects of ozone depletion and vertical mixing on photosynthesis of Antarctic phytoplankton, Nature, 392, 585-589, doi:10.1038/33374. (Pubitemid 28207711)
49. Neale, P. J., J. J. Fritz, and R. F. Davis (2001), Effects of UV on photosynthesis of Antarctic phytoplankton: Models and application to coastal and pelagic assemblages, Rev. Chil. Hist. Nat., 74, 283-292, doi:10.4067/S0716- 078X2001000200006.
50. Peterson, B. J. (1980), Aquatic primary productivity and the 14C-CO2 method: A history of the productivity problem, Annu. Rev. Ecol. Syst., 11, 359-385, doi:10.1146/annurev.es.11.110180.002043.
51. Pienitz, R., and W. F. Vincent (2000), Effect of climate change relative to ozone depletion on UV exposure in subarctic lakes, Nature, 404, 484-487, doi:10.1038/35006616. (Pubitemid 30186887)
52. Platt, T., and S. Sathyendranath (1993), Estimators of primary production for the interpretation of remotely sensed data on ocean color, J. Geophys. Res., 98, 14,561-14,576.
53. Platt, T., C. L. Gallegos, and W. G. Harrison (1980), Photoinhibition of photosynthesis in natural assemblages of marine phytoplankton, J. Mar. Res., 38, 687-701. (Pubitemid 11464323)
54. Platt, T., S. Sathyendrenath, C. M. Caverhill, and M. R. Lewis (1988), Oceanic primary production and available light: Further algorithms for remote sensing, Deep Sea Res., Part A, 35, 855-879, doi:10.1016/0198-0149(88) 90064-7.
55. Platt, T., S. Sathyendranath, and P. Ravindran (1990), Primary production by phytoplankton: Analytic solutions for daily rates per unit area of water surface, Proc. R. Soc. London, Ser. B, 241, 101-111, doi:10.1098/rspb.1990.0072. (Pubitemid 20327854)
56. Platt, T., C. Caverhill, and S. Sathyendranath (1991), Basin-scale estimates of oceanic primary production by remote sensing: The North Atlantic, J. Geophys. Res., 96, 15,147-15,159, doi:10.1029/91JC01118.
57. Richardson, K. (1991), Comparison of 14C primary production determinations made by different laboratories, Mar. Ecol. Prog. Ser., 72, 189-201, doi:10.3354/meps072189.
58. Rodhe, W. (1965), Standard correlations between pelagic photosynthesis and light, in Primary Productivity in Aquatic Environments, edited by C. R. Goldman, pp. 367-381, Univ. of Calif. Press, Berkeley, Calif.
59. Ryther, J. H., and C. S. Yentsch (1957), The estimation of phytoplankton production in the ocean from chlorophyll and light data, Limnol. Oceanogr., 2, 281-286.
60. Sarmiento, J. L., et al. (2004), Response of ocean ecosystems to climate warming, Global Biogeochem. Cycles, 18, GB3003, doi:10.1029/2003GB002134. (Pubitemid 39621733)
61. Sathyendranath, S., and T. Platt (1989), Remote sensing of ocean chlorophyll: Consequence of nonuniform pigment profile, Appl. Opt., 28, 490-495, doi:10.1364/AO.28.000490.
62. Schindler, D. W., P. J. Curtis, B. R. Parker, and M. P. Stainton (1996), Consequences of climate warming and lake acidification for UV-B penetration in North American boreal lakes, Nature, 379, 705-708, doi:10.1038/379705a0. (Pubitemid 26061729)
63. Smith, R. C., and K. S. Baker (1981), Optical properties of the clearest natural waters (200-800 nm), Appl. Opt., 20, 177-184, doi:10.1364/AO.20.000177.
64. Smith, R. C., K. S. Baker, O. Holm-Hansen, and R. S. Olson (1980), Photo-inhibition of photosynthesis in natural waters, Photochem. Photobiol., 31, 585-592, doi:10.1111/j.1751-1097.1980.tb03750.x.
65. Sosik, H. M. (1996), Bio-optical modeling of primary production: Consequences of variability in quantum yield and specific absorption, Mar. Ecol. Prog. Ser., 143, 225-238, doi:10.3354/meps143225.
66. Talling, J. F. (1957), The phytoplankton population as a compound photo-synthetic system, New Phytol., 56, 133-149, doi:10.1111/j.1469-8137.1957. tb06962.x.
67. Uitz, J., H. Claustre, A. Morel, and S. B. Hooker (2006), Vertical distribution of phytoplankton communities in open ocean: An assessment based on surface chlorophyll, J. Geophys. Res., 111, C08005, doi:10.1029/2005JC003207.
68. Vincent, W. F., I. Laurion, and R. Pienitz (1998), Arctic and Antarctic lakes as optical indicators of global change, Ann. Glaciol., 27, 691-696. (Pubitemid 29199106)
69. Vincent, W. F., M. Rautio, and R. Pienitz (2007), Climate control of underwater UV exposure in polar and alpine aquatic ecosystems, in Arctic Alpine Ecosystems and People in a Changing Environment, edited by J. B. Orbaek et al., pp. 227-249, Springer, Berlin, doi:10.1007/978-3-540-48514-8-14.
70. Westberry, T., M. J. Behrenfeld, D. A. Siegel, and E. Boss (2008), Carbon-based primary productivity modeling with vertically resolved photo-acclimation, Global Biogeochem. Cycles, 22, GB2024, doi:10.1029/ 2007GB003078.
71. Zepp, R. G., D. J. Erickson III, N. D. Paul, and B. Sulzberger (2007), Interactive effects of solar UV radiation and climate change on biogeochemical cycling, Photochem. Photobiol. Sci., 6, 286-300, doi:10.1039/b700021a.