Evaluation of free energy landscapes from manipulation experiments

Journal of Statistical Mechanics: Theory and Experiment

Volumn , Issue 3, 2006, Pages

  Imparato, A ^a   Peliti, L ^a  

^a INFN SEZIONE DI NAPOLI   (Italy)

Author keywords

Energy landscapes (theory); Fluctuations (theory); Mechanical properties (DNA, RNA, membranes, bio polymers) (theory)

Indexed keywords

EID: 84856384872     PISSN: 17425468     EISSN: 17425468     Source Type: Journal    
DOI: 10.1088/1742-5468/2006/03/P03005     Document Type: Article

References (22)

1. Carrion-Vasquez M et al 1999 Proc. Nat. Acad. Sci. 96 3694
2. Liphardt J, Onoa B, Smith SB, Tinoco I and Bustamante C 2001 Science 292 733
3. Ritort F, Bustamante C and Tinoco I Jr 2002 Proc. Nat. Acad. Sci. USA 99 13544
4. Onoa B, Dumont S, Liphardt J, Smith S B, Tinoco I and Bustamante C 2003 Science 299 1892
5. Jarzynski C 1997 Phys. Rev. Lett. 78 2690
6. Jarzynski C 1997 Phys. Rev. E 56 5018
7. Crooks GE 1998 J. Stat. Phys. 90 1481
8. Crooks GE 1999 Phys. Rev. E 61 2361
9. Gore J, Ritort F and Bustamante C 2003 Proc. Nat. Acad. Sci. USA 100 12564
10. Ritort F 2004 J. Stat. Mech. P10016
11. Bennett CH 1976 J. Comput. Phys. 22 245
12. Ferrenberg AM and Swendsen RH 1989 Phys. Rev. Lett. 63 1195
13. Hummer G and Szabo A 2001 Proc. Nat. Acad. Sci. USA 98 3658
14. Braun, Hanke A and Seifert U 2004 Phys. Rev. Lett. 93 158105
15. Speck T and Seifert U 2004 Phys. Rev. E 70 066112
16. Imparato A and Peliti L 2005 Europhys. Lett. 70 740
17. Imparato A and Peliti L 2005 Phys. Rev. E 72 046114
18. See, e.g. Greiner A, Strittmatter W and Honerkamp J 1988 J. Stat. Phys. 51 95
19. Mannella R 2002 Int. J. Mod. Phys. C 13 1177
20. Veitshans T, Klimov D and Thirumalai D 1997 Folding Des. 2 1
21. Hoang TX and Cieplak M 2000 J. Chem. Phys. 112 6851
22. Mannella R 2004 Phys. Rev. E 69 041107