Fostering scientific workflow preservation through discovery of substitute services

Proceedings - 2011 7th IEEE International Conference on eScience, eScience 2011

Volumn , Issue , 2011, Pages 97-104

  Belhajjame, Khalid ^a   Goble, Carole ^a   Soiland Reyes, Stian ^a   De Roure, Davide ^b  

^a UNIVERSITY OF MANCHESTER   (United Kingdom)

^b UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

eScience; provenance; Scientific workflow; web services; workflow preservation

Indexed keywords

DATA LINK; E-SCIENCE; GAINING MOMENTUM; PROVENANCE; SCIENTIFIC WORKFLOWS; SERVICE OPERATIONS; WORK-FLOWS; WORKFLOW SPECIFICATION;

EXPERIMENTS; SPECIFICATIONS;

WEB SERVICES;

EID: 84856337669     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/eScience.2011.22     Document Type: Conference Paper

References (23)

1. K. Belhajjame, S. M. Embury, H. Fan, C. A. Goble, H. Hermjakob, S. J. Hubbard, D. Jones, P. Jones, N. Martin, S. Oliver, C. Orengo, N. W. Paton, A. Poulovassilis, J. Siepen, R. Stevens, C. Taylor, N. Vinod, L. Zamboulis, and W. Zhu. Proteome data integration: Characteristics and challenges. In UK All Hands Meeting, 2005.
2. K. Belhajjame, S. M. Embury, and N. W. Paton. On characterising and identifying mismatches in scientific workflows. In DILS, pages 240-247. Springer, 2006.
3. Khalid Belhajjame. Semantic replaceability of escience web services. In eScience, pages 449-456. IEEE Computer Society, 2007.
4. Khalid Belhajjame, Suzanne M. Embury, and Norman W. Paton. On characterising and identifying mismatches in scientific workflows. In 3rd International Workshop on Data Integration in the Life Sciences (DILS 06), pages 240-247. Springer, 2006.
5. Shawn Bowers and Bertram Ludäscher. An ontology-driven framework for data transformation in scientific workflows. In Erhard Rahm, editor, DILS, volume 2994 of Lecture Notes in Computer Science, pages 1-16. Springer, 2004.
6. Jorge Cardoso and Amit P. Sheth. Semantic e-workflow composition. J. Intell. Inf. Syst., 21(3):191-225, 2003.
7. Jorge Cardoso and Amit P. Sheth, editors. Semantic Web Services and Web Process Composition, First International Workshop, SWSWPC 2004, San Diego, CA, USA, July 6, 2004, Revised Selected Papers, volume 3387 of Lecture Notes in Computer Science. Springer, 2004.
8. Xin Dong, Alon Y. Halevy, Jayant Madhavan, Ema Nemes, and Jun Zhang. Simlarity search for web services. In Mario A. Nascimento, M. Tamer Özsu, Donald Kossmann, Renée J. Miller, José A. Blakeley, and K. Bernhard Schiefer, editors, VLDB, pages 372-383. Morgan Kaufmann, 2004.
9. J. Frew, G. Janée, and P. Slaughter. Automatic provenance collection and publishing in a science data production environment - early results. In IPAW, pages 27-33. Springer, 2010.
10. Duncan Hull, Katy Wolstencroft, Robert Stevens, Carole A. Goble, Matthew R. Pocock, Peter Li, and Tom Oinn. Taverna: a tool for building and running workflows of services. Nucleic Acids Research, 34(Web- Server-Issue):729-732, 2006.
11. D. Koop, E. Santos, P. Mates, H. T. Vo, P. Bonnet, B. Bauer, B. Surer, M. Troyer, D. N. Williams, J. E. Tohline, J. Freire, and C. T. Silva. A provenance-based infrastructure to support the life cycle of executable papers. Procedia CS, 4:648-657, 2011.
12. I. Manolescu, L. Afanasiev, A. Arion, J. Dittrich, S. Manegold, N. Polyzotis, K. Schnaitter, P. Senellart, S. Zoupanos, and D. Shasha. The repeatability experiment of sigmod 2008. SIGMOD Record, 37(1):39-45, 2008. (Pubitemid 351654024)
13. Sheila A. McIlraith, Tran Cao Son, and Honglei Zeng. Semantic web services. IEEE Intelligent Systems, 16(2):46-53, 2001.
14. Simon Miles, Sylvia C. Wong, Weijian Fang, Paul T. Groth, Klaus- Peter Zauner, and Luc Moreau. Provenance-based validation of e-science experiments. J. Web Sem., 5(1):28-38, 2007.
15. P. Missier, N. W. Paton, and K. Belhajjame. Fine-grained and efficient lineage querying of collection-based workflow provenance. In EDBT, pages 299-310. ACM, 2010.
16. P. Missier, S. Sanket Sahoo, J. Zhao, C. A. Goble, and A. P. Sheth. anus: From workflows to semantic provenance and linked open data. In IPAW, pages 129-141. Springer, 2010.
17. L. Moreau. The foundations for provenance on the web. Foundations and Trends in Web Science, 2(2-3):99-241, 2010.
18. T. M. Oinn, R. M. Greenwood, M. Addis, M. N. Alpdemir, J. Ferris, K. Glover, C. Goble, A. Goderis, D. Hull, D. Marvin, P. Li, P. Lord, Matthew R. Pocock, M. Senger, R. Stevens, A. Wipat, and C. Wroe. Taverna: lessons in creating a workflow environment for the life sciences. Concurrency and Computation: Practice and Experience, 18(10):1067-1100, 2006. (Pubitemid 44258498)
19. Chun Ouyang, Eric Verbeek, Wil M. P. van der Aalst, Stephan Breutel, Marlon Dumas, and Arthur H. M. ter Hofstede. Formal semantics and analysis of control flow in ws-bpel. Sci. Comput. Program., 67(2-3):162-198, 2007.
20. Uwe Radetzki, Ulf Leser, S. C. Schulze-Rauschenbach, J. Zimmermann, Jens Lüssem, Thomas Bode, and Armin B. Cremers. Adapters, shims, and glue - service interoperability for n silico experiments. Bioinformatics, 22(9):1137-1143, 2006.
21. J. Rothenberg. Ensuring the longevity of digital information. 1995.
22. Kunal Verma and Amit P. Sheth. Semantically annotating a web service. IEEE Internet Computing, 11(2):83-85, 2007.
23. Patrick Ziegler, Christoph Kiefer, Christoph Sturm, Klaus R. Dittrich, and Abraham Bernstein. Detecting similarities in ontologies with the soqa-simpack toolkit. In Yannis E. Ioannidis, Marc H. Scholl, Joachim W. Schmidt, Florian Matthes, Michael Hatzopoulos, Klemens Böhm, Alfons Kemper, Torsten Grust, and Christian Böhm, editors, EDBT, volume 3896 of Lecture Notes in Computer Science, pages 59-76. Springer, 2006.