메뉴 건너뛰기




Volumn 287, Issue 5, 2012, Pages 3197-3206

Acyl chain specificity of ceramide synthases is determined within a region of 150 residues in the tram-lag-CLN8 (TLC) domain

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATION ANALYSIS; BIOSYNTHESIS; CELL MEMBRANES; CERAMIDES; CHAINS;

EID: 84856305649     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.280271     Document Type: Article
Times cited : (58)

References (45)
  • 1
    • 0036303786 scopus 로고    scopus 로고
    • The therapeutic potential of modulating the ceramide/sphingomyelin pathway
    • Kolesnick, R. (2002) The therapeutic potential of modulating the ceramide/sphingomyelin pathway. J. Clin. Invest. 110, 3-8
    • (2002) J. Clin. Invest. , vol.110 , pp. 3-8
    • Kolesnick, R.1
  • 2
    • 0037135626 scopus 로고    scopus 로고
    • The ceramide-centric universe of lipid-mediated cell regulation: Stress encounters of the lipid kind
    • DOI 10.1074/jbc.R200008200
    • Hannun, Y. A., and Obeid, L. M. (2002) The ceramide-centric universe of lipid-mediated cell regulation. Stress encounters of the lipid kind. J. Biol. Chem. 277, 25847-25850 (Pubitemid 34967060)
    • (2002) Journal of Biological Chemistry , vol.277 , Issue.29 , pp. 25847-25850
    • Hannun, Y.A.1    Obeid, L.M.2
  • 3
    • 20444363393 scopus 로고    scopus 로고
    • The ins and outs of sphingolipid synthesis
    • DOI 10.1016/j.tcb.2005.04.006, PII S0962892405001078
    • Futerman, A. H., and Riezman, H. (2005) The ins and outs of sphingolipid synthesis. Trends Cell Biol. 15, 312-318 (Pubitemid 40805327)
    • (2005) Trends in Cell Biology , vol.15 , Issue.6 , pp. 312-318
    • Futerman, A.H.1    Riezman, H.2
  • 4
  • 5
    • 33748746334 scopus 로고    scopus 로고
    • When do Lasses (longevity assurance genes) become CerS (ceramide synthases)? Insights into the regulation of ceramide synthesis
    • DOI 10.1074/jbc.R600010200
    • Pewzner-Jung, Y., Ben-Dor, S., and Futerman, A. H. (2006) When do Lasses (longevity assurance genes) become CerS (ceramide synthases)? Insights into the regulation of ceramide synthesis. J. Biol. Chem. 281, 25001-25005 (Pubitemid 44401887)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.35 , pp. 25001-25005
    • Pewzner-Jung, Y.1    Ben-Dor, S.2    Futerman, A.H.3
  • 6
    • 34548329395 scopus 로고    scopus 로고
    • The metabolism and function of sphingolipids and glycosphingolipids
    • DOI 10.1007/s00018-007-7076-0
    • Lahiri, S., and Futerman, A. H. (2007) The metabolism and function of sphingolipids and glycosphingolipids. Cell. Mol. Life Sci. 64, 2270-2284 (Pubitemid 47347954)
    • (2007) Cellular and Molecular Life Sciences , vol.64 , Issue.17 , pp. 2270-2284
    • Lahiri, S.1    Futerman, A.H.2
  • 7
    • 0242353271 scopus 로고    scopus 로고
    • Two Mammalian Longevity Assurance Gene (LAG1) Family Members, trh1 and trh4, Regulate Dihydroceramide Synthesis Using Different Fatty Acyl-CoA Donors
    • DOI 10.1074/jbc.M307104200
    • Riebeling, C., Allegood, J. C., Wang, E., Merrill, A. H., Jr., and Futerman, A. H. (2003) Two mammalian longevity assurance gene (LAG1) family members, trh1 and trh4, regulate dihydroceramide synthesis using different fatty acyl-CoA donors. J. Biol. Chem. 278, 43452-43459 (Pubitemid 37345968)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.44 , pp. 43452-43459
    • Riebeling, C.1    Allegood, J.C.2    Wang, E.3    Merrill Jr., A.H.4    Futerman, A.H.5
  • 8
    • 77953561361 scopus 로고    scopus 로고
    • Mammalian ceramide synthases
    • Levy, M., and Futerman, A. H. (2010) Mammalian ceramide synthases. IUBMB Life 62, 347-356
    • (2010) IUBMB Life , vol.62 , pp. 347-356
    • Levy, M.1    Futerman, A.H.2
  • 9
    • 23944483995 scopus 로고    scopus 로고
    • Mammalian Lass6 and its related family members regulate synthesis of specific ceramides
    • DOI 10.1042/BJ20050291
    • Mizutani, Y., Kihara, A., and Igarashi, Y. (2005) Mammalian Lass6 and its related family members regulate synthesis of specific ceramides. Biochem. J. 390, 263-271 (Pubitemid 41192252)
    • (2005) Biochemical Journal , vol.390 , Issue.1 , pp. 263-271
    • Mizutani, Y.1    Kihara, A.2    Igarashi, Y.3
  • 10
    • 78049498376 scopus 로고    scopus 로고
    • Ceramide synthases. Roles in cell physiology and signaling
    • Stiban, J., Tidhar, R., and Futerman, A. H. (2010) Ceramide synthases. Roles in cell physiology and signaling. Adv. Exp. Med. Biol. 688, 60-71
    • (2010) Adv. Exp. Med. Biol. , vol.688 , pp. 60-71
    • Stiban, J.1    Tidhar, R.2    Futerman, A.H.3
  • 11
    • 26644468150 scopus 로고    scopus 로고
    • LASS5 is a bona fide dihydroceramide synthase that selectively utilizes palmitoyl-CoA as acyl donor
    • DOI 10.1074/jbc.M506485200
    • Lahiri, S., and Futerman, A. H. (2005) LASS5 is a bona fide dihydroceramide synthase that selectively utilizes palmitoyl-CoA as acyl donor. J. Biol. Chem. 280, 33735-33738 (Pubitemid 41443091)
    • (2005) Journal of Biological Chemistry , vol.280 , Issue.40 , pp. 33735-33738
    • Lahiri, S.1    Futerman, A.H.2
  • 12
    • 41949140023 scopus 로고    scopus 로고
    • Characterization of ceramide synthase 2. Tissue distribution, substrate specificity, and inhibition by sphingosine 1-phosphate
    • Laviad, E. L., Albee, L., Pankova-Kholmyansky, I., Epstein, S., Park, H., Merrill, A. H., Jr., and Futerman, A. H. (2008) Characterization of ceramide synthase 2. Tissue distribution, substrate specificity, and inhibition by sphingosine 1-phosphate. J. Biol. Chem. 283, 5677-5684
    • (2008) J. Biol. Chem. , vol.283 , pp. 5677-5684
    • Laviad, E.L.1    Albee, L.2    Pankova-Kholmyansky, I.3    Epstein, S.4    Park, H.5    Merrill Jr., A.H.6    Futerman, A.H.7
  • 13
    • 0036682881 scopus 로고    scopus 로고
    • TRAM, LAG1 and CLN8: Members of a novel family of lipid-sensing domains?
    • DOI 10.1016/S0968-0004(02)02154-0, PII S0968000402021540
    • Winter, E., and Ponting, C. P. (2002) TRAM, LAG1, and CLN8. Members of a novel family of lipid-sensing domains? Trends Biochem. Sci. 27, 381-383 (Pubitemid 34874742)
    • (2002) Trends in Biochemical Sciences , vol.27 , Issue.8 , pp. 381-383
    • Winter, E.1    Ponting, C.P.2
  • 14
    • 0032429260 scopus 로고    scopus 로고
    • Homologs of the yeast longevity gene LAG1 in Caenorhabditis elegans and human
    • Jiang, J. C., Kirchman, P. A., Zagulski, M., Hunt, J., and Jazwinski, S. M. (1998) Homologs of the yeast longevity gene LAG1 in Caenorhabditis elegans and human. Genome Res. 8, 1259-1272 (Pubitemid 29039098)
    • (1998) Genome Research , vol.8 , Issue.12 , pp. 1259-1272
    • Jiang, J.C.1    Kirchman, P.A.2    Zagulski, M.3    Hunt, J.4    Michal, J.S.5
  • 15
    • 0037174116 scopus 로고    scopus 로고
    • Do longevity assurance genes containing Hox domains regulate cell development via ceramide synthesis?
    • DOI 10.1016/S0014-5793(02)03248-9, PII S0014579302032489
    • Venkataraman, K., and Futerman, A. H. (2002) Do longevity assurance genes containing Hox domains regulate cell development via ceramide synthesis? FEBS Lett. 528, 3-4 (Pubitemid 35257989)
    • (2002) FEBS Letters , vol.528 , Issue.1-3 , pp. 3-4
    • Venkataraman, K.1    Futerman, A.H.2
  • 17
    • 33748742094 scopus 로고    scopus 로고
    • Transmembrane topology of ceramide synthase in yeast
    • DOI 10.1042/BJ20060697
    • Kageyama-Yahara, N., and Riezman, H. (2006) Transmembrane topology of ceramide synthase in yeast. Biochem. J. 398, 585-593 (Pubitemid 44453404)
    • (2006) Biochemical Journal , vol.398 , Issue.3 , pp. 585-593
    • Kageyama-Yahara, N.1    Riezman, H.2
  • 18
    • 34848912605 scopus 로고    scopus 로고
    • A new functional motif in hox domain-containing ceramide synthases: Identification of a novel region flanking the hox and TLC domains essential for activity
    • DOI 10.1074/jbc.M703487200
    • Mesika, A., Ben-Dor, S., Laviad, E. L., and Futerman, A. H. (2007) A new functional motif in Hox domain-containing ceramide synthases. Identification of a novel region flanking the Hox and TLC domains essential for activity. J. Biol. Chem. 282, 27366-27373 (Pubitemid 47501947)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.37 , pp. 27366-27373
    • Mesika, A.1    Ben-Dor, S.2    Laviad, E.L.3    Futerman, A.H.4
  • 19
    • 0027413499 scopus 로고
    • The long-chain sphingoid base of sphingolipids is acylated at the cytosolic surface of the endoplasmic reticulum in rat liver
    • Hirschberg, K., Rodger, J., and Futerman, A. H. (1993) The long-chain sphingoid base of sphingolipids is acylated at the cytosolic surface of the endoplasmic reticulum in rat liver. Biochem. J. 290, 751-757 (Pubitemid 23100434)
    • (1993) Biochemical Journal , vol.290 , Issue.3 , pp. 751-757
    • Hirschberg, K.1    Rodger, J.2    Futerman, A.H.3
  • 21
    • 33645021327 scopus 로고    scopus 로고
    • RF cloning. A restriction-free method for inserting target genes into plasmids
    • van den Ent, F., and Löwe, J. (2006) RF cloning. A restriction-free method for inserting target genes into plasmids. J. Biochem. Biophys. Methods 67, 67-74
    • (2006) J. Biochem. Biophys. Methods , vol.67 , pp. 67-74
    • Van Den Ent, F.1    Löwe, J.2
  • 25
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE, multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. (2004) MUSCLE, multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32, 1792-1797
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 27
    • 0000122573 scopus 로고
    • PHYLIP-Phylogeny Inference Package (Version 3.2)
    • Felsenstein, J. (1989) PHYLIP-Phylogeny Inference Package (Version 3.2). Cladistics 5, 164-166
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 28
    • 0036763207 scopus 로고    scopus 로고
    • On filtering false positive transmembrane protein predictions
    • Cserzö, M., Eisenhaber, F., Eisenhaber, B., and Simon, I. (2002) On filtering false positive transmembrane protein predictions. Protein Eng. 15, 745-752 (Pubitemid 35470431)
    • (2002) Protein Engineering , vol.15 , Issue.9 , pp. 745-752
    • Cserzo, M.1    Eisenhaber, F.2    Eisenhaber, B.3    Simon, I.4
  • 29
    • 0034786532 scopus 로고    scopus 로고
    • The HMMTOP transmembrane topology prediction server
    • Tusnády, G. E., and Simon, I. (2001) The HMMTOP transmembrane topology prediction server. Bioinformatics 17, 849-850 (Pubitemid 32970487)
    • (2001) Bioinformatics , vol.17 , Issue.9 , pp. 849-850
    • Tusnady, G.E.1    Simon, I.2
  • 30
    • 48749084114 scopus 로고    scopus 로고
    • MemBrain, improving the accuracy of predicting transmembrane helices
    • Shen, H., and Chou, J. J. (2008) MemBrain, improving the accuracy of predicting transmembrane helices. PLoS One 3, e2399
    • (2008) PLoS One , vol.3
    • Shen, H.1    Chou, J.J.2
  • 31
    • 34047151404 scopus 로고    scopus 로고
    • Improving the accuracy of transmembrane protein topology prediction using evolutionary information
    • Jones, D. T. (2007) Improving the accuracy of transmembrane protein topology prediction using evolutionary information. Bioinformatics 23, 538-544
    • (2007) Bioinformatics , vol.23 , pp. 538-544
    • Jones, D.T.1
  • 32
    • 0032834939 scopus 로고    scopus 로고
    • An hierarchical artificial neural network system for the classification of transmembrane proteins
    • Pasquier, C., and Hamodrakas, S. J. (1999) An hierarchical artificial neural network system for the classification of transmembrane proteins. Protein Eng. 12, 631-634 (Pubitemid 29425546)
    • (1999) Protein Engineering , vol.12 , Issue.8 , pp. 631-634
    • Pasquier, C.1    Hamodrakas, S.J.2
  • 33
    • 0029889988 scopus 로고    scopus 로고
    • PHD, predicting one-dimensional protein structure by profile-based neural networks
    • Rost, B. (1996) PHD, predicting one-dimensional protein structure by profile-based neural networks. Methods Enzymol. 266, 525-539
    • (1996) Methods Enzymol. , vol.266 , pp. 525-539
    • Rost, B.1
  • 34
    • 57149112523 scopus 로고    scopus 로고
    • Transmembrane topology and signal peptide prediction using dynamic bayesian networks
    • Reynolds, S. M., Käll, L., Riffle, M. E., Bilmes, J. A., and Noble, W. S. (2008) Transmembrane topology and signal peptide prediction using dynamic bayesian networks. PLoS Comput. Biol. 4, e1000213
    • (2008) PLoS Comput. Biol. , vol.4
    • Reynolds, S.M.1    Käll, L.2    Riffle, M.E.3    Bilmes, J.A.4    Noble, W.S.5
  • 35
    • 34547584314 scopus 로고    scopus 로고
    • Advantages of combined transmembrane topology and signal peptide prediction. The Phobius web server
    • Käll, L., Krogh, A., and Sonnhammer, E. L. (2007) Advantages of combined transmembrane topology and signal peptide prediction. The Phobius web server. Nucleic Acids Res. 35, W429-W432
    • (2007) Nucleic Acids Res. , vol.35
    • Käll, L.1    Krogh, A.2    Sonnhammer, E.L.3
  • 36
    • 0031826040 scopus 로고    scopus 로고
    • SOSUI: classification and secondary structure prediction system for membrane proteins
    • Hirokawa, T., Boon-Chieng, S., and Mitaku, S. (1998) SOSUI, classification and secondary structure prediction system for membrane proteins. Bioinformatics 14, 378-379 (Pubitemid 28393805)
    • (1998) Bioinformatics , vol.14 , Issue.4 , pp. 378-379
    • Hirokawa, T.1    Boon-Chieng, S.2    Mitaku, S.3
  • 37
    • 0036557845 scopus 로고    scopus 로고
    • Basic charge clusters and predictions of membrane protein topology
    • Jureti, D., Zorani, L., and Zuci, D. (2002) Basic charge clusters and predictions of membrane protein topology. J. Chem. Inf. Comput. Sci. 42, 620-632
    • (2002) J. Chem. Inf. Comput. Sci. , vol.42 , pp. 620-632
    • Jureti, D.1    Zorani, L.2    Zuci, D.3
  • 38
    • 1842789432 scopus 로고    scopus 로고
    • SVMtm, support vector machines to predict transmembrane segments
    • Yuan, Z., Mattick, J. S., and Teasdale, R. D. (2004) SVMtm, support vector machines to predict transmembrane segments. J. Comput. Chem. 25, 632-636
    • (2004) J. Comput. Chem. , vol.25 , pp. 632-636
    • Yuan, Z.1    Mattick, J.S.2    Teasdale, R.D.3
  • 39
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • DOI 10.1006/jmbi.2000.4315
    • Krogh, A., Larsson, B., von Heijne, G., and Sonnhammer, E. L. (2001) Predicting transmembrane protein topology with a hidden Markov model. Application to complete genomes. J. Mol. Biol. 305, 567-580 (Pubitemid 33032862)
    • (2001) Journal of Molecular Biology , vol.305 , Issue.3 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    Von Heijne, G.3    Sonnhammer, E.L.L.4
  • 40
    • 0000207681 scopus 로고
    • TMbase-A database of membrane spanning protein segments
    • Hofmann, K., and Stoffel, W. (1993) TMbase-A database of membrane spanning protein segments. Biol. Chem. Hoppe-Seyler 374, 166
    • (1993) Biol. Chem. Hoppe-Seyler , vol.374 , pp. 166
    • Hofmann, K.1    Stoffel, W.2
  • 42
    • 0037144554 scopus 로고    scopus 로고
    • Upstream of growth and differentiation factor 1 (uog1), a mammalian homolog of the yeast longevity assurance gene 1 (LAG1), regulates N-stearoyl-sphinganine (C18-(dihydro)ceramide) synthesis in a fumonisin B1-independent manner in mammalian cells
    • Venkataraman, K., Riebeling, C., Bodennec, J., Riezman, H., Allegood, J. C., Sullards, M. C., Merrill, A. H., Jr., and Futerman, A. H. (2002) Upstream of growth and differentiation factor 1 (uog1), a mammalian homolog of the yeast longevity assurance gene 1 (LAG1), regulates N-stearoyl-sphinganine (C18-(dihydro)ceramide) synthesis in a fumonisin B1-independent manner in mammalian cells. J. Biol. Chem. 277, 35642-35649
    • (2002) J. Biol. Chem. , vol.277 , pp. 35642-35649
    • Venkataraman, K.1    Riebeling, C.2    Bodennec, J.3    Riezman, H.4    Allegood, J.C.5    Sullards, M.C.6    Merrill Jr., A.H.7    Futerman, A.H.8
  • 43
    • 0035970197 scopus 로고    scopus 로고
    • Analysis of sphingosine 1-phosphate, ceramides, and other bioactive sphingolipids by high-performance liquid chromatography-tandem mass spectrometry
    • Sullards, M. C., and Merrill, A. H., Jr. (2001) Analysis of sphingosine 1-phosphate, ceramides, and other bioactive sphingolipids by high-performance liquid chromatography-tandem mass spectrometry. Sci. STKE 2001, pl1
    • (2001) Sci. STKE , vol.2001
    • Sullards, M.C.1    Merrill Jr., A.H.2
  • 44
    • 19444380734 scopus 로고    scopus 로고
    • Sphingolipidomics: High-throughput, structure-specific, and quantitative analysis of sphingolipids by liquid chromatography tandem mass spectrometry
    • DOI 10.1016/j.ymeth.2005.01.009, PII S1046202305000496
    • Merrill, A. H., Jr., Sullards, M. C., Allegood, J. C., Kelly, S., and Wang, E. (2005) Sphingolipidomics, high throughput, structure-specific, and quantitative analysis of sphingolipids by liquid chromatography tandem mass spectrometry. Methods 36, 207-224 (Pubitemid 40726151)
    • (2005) Methods , vol.36 , Issue.2 SPEC. ISS. , pp. 207-224
    • Merrill Jr., A.H.1    Sullards, M.C.2    Allegood, J.C.3    Kelly, S.4    Wang, E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.