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Volumn 840, Issue , 2012, Pages 101-110

Case Study: Using a nondestructive DNA extraction method to generate mtDNA sequences from historical chimpanzee specimens

Author keywords

ancient DNA; chimpanzees; DNA damage; genetic diversity; mitochondrial DNA (mtDNA); museum collections; non destructive DNA extraction; phylogeography; population extinction

Indexed keywords

MITOCHONDRIAL DNA;

EID: 84856292511     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-516-9_14     Document Type: Article
Times cited : (3)

References (27)
  • 1
    • 0031470484 scopus 로고    scopus 로고
    • Neandertal DNA sequences and the origin of modern humans
    • Krings M, Stone A, Schmitz RW et al (1997) Neandertal DNA sequences and the origin of modern humans. Cell 90:19-30
    • (1997) Cell , vol.90 , pp. 19-30
    • Krings, M.1    Stone, A.2    Schmitz, R.W.3
  • 2
    • 0032499749 scopus 로고    scopus 로고
    • A genetic record of population isolation in pocket gophers during Holocene climatic change
    • Hadly EA, Kohn MH, Leonard JA et al (1998) A genetic record of population isolation in pocket gophers during Holocene climatic change. Proc Natl Acad Sci USA 95:6893-6896
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 6893-6896
    • Hadly, E.A.1    Kohn, M.H.2    Leonard, J.A.3
  • 3
    • 2442560471 scopus 로고    scopus 로고
    • Nondestructive DNA extraction method for mitochondrial DNA analyses of museum specimens
    • Rohland N, Siedel H, Hofreiter M (2004) Nondestructive DNA extraction method for mitochondrial DNA analyses of museum specimens. Biotechniques 36(814-816):818-821
    • (2004) Biotechniques , vol.36 , Issue.814-816 , pp. 818-821
    • Rohland, N.1    Siedel, H.2    Hofreiter, M.3
  • 4
    • 0004659233 scopus 로고
    • On the local races of chimpanzees
    • Schwarz E (1934) On the local races of chimpanzees. Ann Mag Nat Hist Lond 13: 576-583
    • (1934) Ann Mag Nat Hist Lond , vol.13 , pp. 576-583
    • Schwarz, E.1
  • 6
    • 0004084108 scopus 로고    scopus 로고
    • Smithsonian Institution Press, Washington, DC
    • Groves CP (2001) Primate taxonomy. Smithsonian Institution Press, Washington, DC, 350p
    • (2001) Primate Taxonomy , pp. 350
    • Groves, C.P.1
  • 7
    • 1842292081 scopus 로고    scopus 로고
    • A new West African chimpanzee subspecies?
    • Gonder MK, Oates JF, Disotell TR et al (1997) A new West African chimpanzee subspecies? Nature 388:337
    • (1997) Nature , vol.388 , pp. 337
    • Gonder, M.K.1    Oates, J.F.2    Disotell, T.R.3
  • 8
    • 33750265257 scopus 로고    scopus 로고
    • New genetic evidence on the evolution of chimpanzee populations and implications for taxonomy
    • Gonder MK, Disotell TR, Oates JF (2006) New genetic evidence on the evolution of chimpanzee populations and implications for taxonomy. Int J Primatol 27:1103-1127
    • (2006) Int J Primatol , vol.27 , pp. 1103-1127
    • Gonder, M.K.1    Disotell, T.R.2    Oates, J.F.3
  • 10
    • 33750249522 scopus 로고    scopus 로고
    • Contrasting phylogeographic histories of chimpanzees in Nigeria and Cameroon: A multilocus analysis
    • Lehman S, Fleagle J (eds) . Springer, New York
    • Gonder MK, Disotell TR (2006) Contrasting phylogeographic histories of chimpanzees in Nigeria and Cameroon: a multilocus analysis. In: Lehman S, Fleagle J (eds) Primate biogeography. Springer, New York, pp 129-161
    • (2006) Primate Biogeography , pp. 129-161
    • Gonder, M.K.1    Disotell, T.R.2
  • 11
    • 33750265257 scopus 로고    scopus 로고
    • New genetic evidence on the evolution of chimpanzee populations and implications for taxonomy
    • Gonder MK, Disotell T, Oates JF (2006) New genetic evidence on the evolution of chimpanzee populations and implications for taxonomy. Int J Primatol 27:1103-1127
    • (2006) Int J Primatol , vol.27 , pp. 1103-1127
    • Gonder, M.K.1    Disotell, T.2    Oates, J.F.3
  • 12
  • 13
    • 53449084230 scopus 로고    scopus 로고
    • Alarming decline of West African chimpanzees in Côte d'Ivoire
    • Campbell G, Kuehl H, N'Goran KP et al (2008) Alarming decline of West African chimpanzees in Côte d'Ivoire. Curr Biol 18:903-904
    • (2008) Curr Biol , vol.18 , pp. 903-904
    • Campbell, G.1    Kuehl, H.2    N'Goran, K.P.3
  • 14
    • 0037431235 scopus 로고    scopus 로고
    • Catastrophic ape decline in western equatorial Africa
    • Walsh PD, Abernethy KA, Bermejo M et al (2003) Catastrophic ape decline in western equatorial Africa. Nature 422:611-614
    • (2003) Nature , vol.422 , pp. 611-614
    • Walsh, P.D.1    Abernethy, K.A.2    Bermejo, M.3
  • 15
    • 77950495688 scopus 로고    scopus 로고
    • Chimpanzees are close to extinction in Southwest Nigeria
    • Greengrass E (2009) Chimpanzees are close to extinction in Southwest Nigeria. Prim Cons 24:77-83
    • (2009) Prim Cons , vol.24 , pp. 77-83
    • Greengrass, E.1
  • 16
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95-98
    • (1999) Nucl Acids Symp ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 17
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs (Review)
    • Altschul SF, Madden TL, Schäffer AA et al (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs (Review). Nucleic Acids Res 25: 3389-3402
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3
  • 18
    • 84856272061 scopus 로고    scopus 로고
    • TempNet: A method to display statistical parsimony networks for heterochronous DNA sequence data
    • doi: 10.1111/j.2041-210X.2011.00129.x
    • Prost S, Anderson CNK (2011) TempNet: a method to display statistical parsimony networks for heterochronous DNA sequence data. Methods Ecol Evol 2:663-667. doi: 10.1111/j.2041-210X.2011.00129.x
    • (2011) Methods Ecol Evol , vol.2 , pp. 663-667
    • Prost, S.1    Anderson, C.N.K.2
  • 19
    • 33644832027 scopus 로고    scopus 로고
    • Tenrec phylogeny and the noninvasive extraction of nuclear DNA
    • Asher RJ, Hofreiter M (2006) Tenrec phylogeny and the noninvasive extraction of nuclear DNA. Syst Biol 55(2):181-194
    • (2006) Syst Biol , vol.55 , Issue.2 , pp. 181-194
    • Asher, R.J.1    Hofreiter, M.2
  • 21
    • 0035581087 scopus 로고    scopus 로고
    • DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA
    • Hofreiter M, Jaenicke V, Serre D, Haeseler Av A, Pääbo S (2001) DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA. Nucleic Acids Res 29(23):4793-4799
    • (2001) Nucleic Acids Res , vol.29 , Issue.23 , pp. 4793-4799
    • Hofreiter, M.1    Jaenicke, V.2    Serre, D.3    Haeseler Av, A.4    Pääbo, S.5
  • 22
    • 36549021060 scopus 로고    scopus 로고
    • Genome-wide in situ exon capture for selective resequencing
    • Hodges E, Xuan Z, Balija V et al (2007) Genome-wide in situ exon capture for selective resequencing. Nat Genet 39:1522-1527
    • (2007) Nat Genet , vol.39 , pp. 1522-1527
    • Hodges, E.1    Xuan, Z.2    Balija, V.3
  • 23
    • 66749159688 scopus 로고    scopus 로고
    • Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing
    • Hodges E, Rooks M, Xuan Z et al (2009) Hybrid selection of discrete genomic intervals on custom-designed microarrays for massively parallel sequencing. Nat Protoc 4:960-974
    • (2009) Nat Protoc , vol.4 , pp. 960-974
    • Hodges, E.1    Rooks, M.2    Xuan, Z.3
  • 24
    • 59849113821 scopus 로고    scopus 로고
    • Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing
    • Gnirke A, Melnikov A, Maguire J et al (2009) Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing. Nat Biotechnol 27:182-189
    • (2009) Nat Biotechnol , vol.27 , pp. 182-189
    • Gnirke, A.1    Melnikov, A.2    Maguire, J.3
  • 25
    • 67650831473 scopus 로고    scopus 로고
    • Targeted retrieval and analysis of five Neandertal mtDNA genomes
    • Briggs AW, Good JM, Green RE et al (2009) Targeted retrieval and analysis of five Neandertal mtDNA genomes. Science 325: 318-321
    • (2009) Science , vol.325 , pp. 318-321
    • Briggs, A.W.1    Good, J.M.2    Green, R.E.3
  • 26
    • 75749095504 scopus 로고    scopus 로고
    • A complete mtDNA genome of an early modern human from Kostenki, Russia
    • Krause J, Briggs AW, Kircher M et al (2010) A complete mtDNA genome of an early modern human from Kostenki, Russia. Curr Biol 20:231-236
    • (2010) Curr Biol , vol.20 , pp. 231-236
    • Krause, J.1    Briggs, A.W.2    Kircher, M.3
  • 27
    • 77952206860 scopus 로고    scopus 로고
    • Targeted investigation of the Neandertal genome by array-based sequence capture
    • Burbano HA, Hodges E, Green RE et al (2010) Targeted investigation of the Neandertal genome by array-based sequence capture. Science 328:723-725
    • (2010) Science , vol.328 , pp. 723-725
    • Burbano, H.A.1    Hodges, E.2    Green, R.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.