Fine-scale temporal and spatial variation of taxon and clonal structure in the Daphnia longispina hybrid complex in heterogeneous environments

BMC Evolutionary Biology

Volumn 12, Issue 1, 2012, Pages

  Yin, Mingbo ^a,b   Petrusek, Adam ^c   Seda, Jaromir ^d   Wolinska, Justyna ^a  

^a UNIVERSITY OF MUNICH   (Germany)

^b FUDAN UNIVERSITY   (China)

^c CHARLES UNIVERSITY   (Czech Republic)

^d INSTITUTE OF HYDROBIOLOGY   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

ALLOZYME; COMMUNITY STRUCTURE; CRUSTACEAN; ENVIRONMENTAL CHANGE; FREQUENCY DEPENDENCE; GENETIC MARKER; GENOMICS; HYBRID; LACUSTRINE ENVIRONMENT; PARTHENOGENESIS; POPULATION STRUCTURE; SPATIAL VARIATION; SPECIES COMPLEX; TAXONOMY;

CLADOCERA; DAPHNIA; DAPHNIA GALEATA; DAPHNIA LONGISPINA; SIPHONAPTERA (FLEAS);

MICROSATELLITE DNA;

ANIMAL; ARTICLE; CLASSIFICATION; DAPHNIA; ECOSYSTEM; GENETICS; POPULATION GENETICS;

ANIMALS; DAPHNIA; ECOSYSTEM; GENETICS, POPULATION; MICROSATELLITE REPEATS;

EID: 84856155543     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-12-12     Document Type: Article

References (62)

1. Genotypic characteristics of cyclic parthenogens and their obligately asexual derivates. Hebert PDN, The evolution of sex and its consequences Basel: Birkhäuser Verlag, Stearns S, 1987 175 195
2. Distribution of spontaneous plant hybrids. Ellstrand NC, Whitkus R, Rieseberg LH, Proc Natl Acad Sci USA 1996 93 5090 5093 10.1073/pnas.93.10.5090 11607681 (Pubitemid 26162875)
3. Impact of clonal growth on effective population size in Hymenoxys herbacea (Asteraceae). Campbell LG, Husband BC, Heredity 2005 94 526 532 10.1038/sj.hdy.6800653 15741998 (Pubitemid 40641175)
4. Strong differences in the clonal variation of two Daphnia species from mountain lakes affected by overwintering strategy. Hamrová E, Mergeay J, Petrusek A, BMC Evol Biol 2011 11 231 10.1186/1471-2148-11-231 21824417
5. Kin-structured colonization in Phalacrus substriatus. Ingvarsson PK, Heredity 1998 80 456 463 10.1046/j.1365-2540.1998.00306.x (Pubitemid 28195525)
6. Coexistence of clones in a heterogeneous environment. Vrijenhoek RC, Science 1978 199 549 552 10.1126/science.199.4328.549 17750021 (Pubitemid 8298039)
7. Genetic and clonal diversity for Myrica cerifera along a spatiotemporal island chronosequence. Erickson DL, Hamrick JL, Heredity 2003 90 25 32 10.1038/sj.hdy.6800172 12522422 (Pubitemid 36251120)
8. Clonal erosion and genetic drift in cyclical parthenogens-the interplay between neutral and selective processes. Vanoverbeke J, De Meester L, J Evol Biol 2010 23 997 1012 10.1111/j.1420-9101.2010.01970.x 20345816
9. Population biology of Daphnia. Hebert PDN, Biol Rev Camb Philos Soc 1978 53 3 387 426 10.1111/j.1469-185X.1978.tb00860.x
10. Limnoecology: The Ecology of Lakes and Streams. Lampert W, Sommer U, Oxford: Oxford University Press 2 2007
11. Daphnia: Development of a model organism in ecology and evolution. Book 21. Lampert W, Excellence in ecology Oldendorf/Luhe: International Ecology Institute, Kinne O, 2011
12. Interspecific hybridization between cyclic parthenogens. Hebert PDN, Evolution 1985 39 216 220 10.2307/2408534
13. Evolutionary and ecological consequences of interspecific hybridization in cladocerans. Schwenk K, Spaak P, Experientia 1995 51 465 481 10.1007/BF02143199
14. A taxonomic reappraisal of the European Daphnia longispina complex (Crustacea, Cladocera, Anomopoda). Petrusek A, Hobæk A, Nilssen JP, Skage M, ern M, Brede N, Schwenk K, Zool Scr 2008 37 507 519 10.1111/j.1463-6409.2008. 00336.x
15. Spatial, environmental and anthropogenic effects on the taxon composition of hybridizing Daphnia. Keller B, Wolinska J, Manca M, Spaak P, Phil Trans R Soc B 2008 363 2943 2952 10.1098/rstb.2008.0044 18508753
16. Reproductive isolation keeps hybridizing Daphnia species distinct. Keller B, Wolinska J, Tellenbach C, Spaak P, Limnol Oceanogr 2007 52 984 991 10.4319/lo.2007.52.3.0984 (Pubitemid 46827149)
17. Spatial distribution of the Daphnia longispina species complex and other planktonic crustaceans in the heterogeneous environment of canyon-shaped reservoirs. Seda J, Petrusek A, Machacek J, Smilauer P, J Plankton Res 2007 29 619 628 10.1093/plankt/fbm044 (Pubitemid 47356066)
18. Clonal diversity, clonal persistence and rapid taxon replacement in natural populations of species and hybrids of the Daphnia longispina complex. Yin M, Wolinska J, Gieler S, Mol Ecol 2010 19 4168 4178 10.1111/j.1365-294X. 2010.04807.x
19. Phylogenetic evidence for hybrid origins of asexual lineages in an aphid species. Delmotte F, Sabater-Munoz B, Prunier-Leterme N, Latorre A, Sunnucks P, Rispe C, Simon JC, Evolution 2003 57 1291 1303 12894937 (Pubitemid 36821241)
20. Nonrandom sexual reproduction and diapausing egg production in a Daphnia hybrid species complex. Keller B, Spaak P, Limnol Oceanogr 2004 49 1393 1400 10.4319/lo.2004.49.4-part-2.1393 (Pubitemid 39040318)
21. The impact of human-made ecological changes on the genetic architecture of Daphnia species. Brede N, Sandrock C, Straile D, Spaak P, Jankowski T, Streit B, Schwenk K, Proc Natl Acad Sci USA 2009 106 4758 4763 10.1073/pnas.0807187106 19273852
22. Allochronic differentiation among Daphnia species, hybrids and backcrosses: the importance of sexual reproduction for population dynamics and genetic architecture. Jankowski T, Straile D, J Evol Biol 2004 17 312 321 15009265 (Pubitemid 38300490)
23. Temporal changes in the genetic structure of the Daphnia species complex in Tjeukemeer, with evidence for backcrossing. Spaak P, Heredity 1996 76 539 548 10.1038/hdy.1996.77 (Pubitemid 126729137)
24. Daphnia hybridization along ecological gradients in pelagic environments: the potential for the presence of hybrid zones in plankton. Petrusek A, Seda J, Macháek J, Ruthová milauer P, Phil Trans R Soc B 2008 363 2931 2941 10.1098/rstb.2008.0026 18508758
25. The importance of hatching from resting eggs for population dynamics and genetic composition of Daphnia in a deep reservoir. Rother A, Pitsch M, Hülsmann S, Freshw Biol 2010 55 2319 2331
26. Daphnia galeata in the deep hypolimnion: spatial differentiation of a "typical epilimnetic" species. Seda J, Kolarova K, Petrusek A, Machacek J, Hydrobiologia 2007 594 47 57 10.1007/s10750-007-9075-4 (Pubitemid 47630581)
27. RAPD identification of microsatellites in Daphnia. Ender A, Schwenk K, Stadler T, Streit B, Schierwater B, Mol Ecol 1996 5 437 441 8688961 (Pubitemid 126594618)
28. The cost of being common: evidence from natural Daphnia populations. Wolinska J, Spaak P, Evolution 2009 63 1893 1901 10.1111/j.1558-5646.2009.00663. x 19228186
29. Contribution of cyclic parthenogenesis and colonization history to population structure in Daphnia. Thielsch A, Brede N, Petrusek A, De Meester L, Schwenk K, Mol Ecol 2009 18 1616 1628 10.1111/j.1365-294X.2009.04130.x 19298264
30. The use of random amplified polymorphic DNA markers in wheat. Devos KM, Gale MD, Theor Appl Genet 1992 84 567 572
31. Clone identification and clonal structure of the European aspen (Populus tremula). Suvanto LI, Latva-Karjanmaa TB, Mol Ecol 2005 14 2851 2860 10.1111/j.1365-294X.2005.02634.x 16029483 (Pubitemid 41576966)
32. Microsatellite markers for European Daphnia. Brede N, Thielsch A, Sandrock C, Spaak P, Keller B, Streit B, Schwenk K, Mol Ecol Notes 2006 6 536 539 10.1111/j.1471-8286.2005.01218.x (Pubitemid 43780787)
33. Identifying hybridizing taxa within the Daphnia longispina species complex: a comparison of genetic methods and phenotypic approaches. Dlouhá S, Thielsch A, Kraus R, Seda J, Schwenk K, Petrusek A, Hydrobiologia 2010 643 107 122 10.1007/s10750-010-0128-8
34. Anthropogenic eutrophication shapes the past and present taxonomic composition of hybridizing Daphnia in unproductive lakes. Rellstab C, Keller B, Girardclos S, Anselmetti FS, Spaak P, Limnol Oceanogr 2011 56 292 302 10.4319/lo.2011.56.1.0292
35. Admixed sexual and facultatively asexual aphid lineages at mating sites. Halkett F, Plantegenest M, Prunier-Leterme N, Mieuzet L, Delmotte F, Simon JC, Mol Ecol 2005 14 325 336 15643974 (Pubitemid 40141498)
36. Fitness effects of advantageous mutations in evolving Escherichia coli populations. Imhof M, Schlotterer C, Proc Natl Acad Sci USA 2001 98 1113 1117 10.1073/pnas.98.3.1113 11158603 (Pubitemid 32121195)
37. Life history variation and the coexistence of a Daphnia hybrid with its parental species. Spaak P, Hoekstra JR, Ecology 1995 76 553 564 10.2307/1941213
38. Influence of food quality on growth and reproduction in Daphnia. Groeger AW, Schram MD, Marzole GR, Freshw Biol 1991 26 11 19 10.1111/j.1365-2427.1991. tb00504.x
39. Effect of temperature in laboratory studies on development and growth of Cladocera and Copepoda from Tjeukemeer, The Netherlands. Vijverberg J, Freshw Biol 1980 10 317 340 10.1111/j.1365-2427.1980.tb01206.x
40. Fine-scale genetic analysis of Daphnia host populations infected by two virulent parasites-strong fluctuations in clonal structure at small temporal and spatial scales. Yin M, Petrusek A, Seda J, Wolinska J, Int J Parasitol 2012 42 115 121 10.1016/j.ijpara.2011.11.004 22154851
41. MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P, Mol Ecol Notes 2004 4 535 538 10.1111/j.1471-8286.2004.00684.x (Pubitemid 39147523)
42. GENETIX 4.05, logiciel sous Windows TM pour la génétique des populations. Belkhir K, Borsa P, Chikhi L, Raufaste N, Bonhomme F, Montpellier: Université de Montpellier II, Laboratoire Génome, Populations, Interactions, CNRS UMR 5000 2004 http://www.genetix.univ-montp2.fr
43. Analysis of reticulate relationships within the Daphnia longispina species complex. Allozyme phenotype and morphology. Gieler S, J Evol Biology 1997 10 87 105 10.1007/s000360050011 (Pubitemid 27452826)
44. A model-based method for identifying species hybrids using multilocus genetic data. Anderson EC, Thompson EA, Genetics 2002 160 1217 1229 11901135 (Pubitemid 34263481)
45. MLGsim: a program for detecting clones using a simulation approach. Stenberg P, Lundmark M, Saura A, Mol Ecol Notes 2003 3 329 331 10.1046/j.1471-8286.2003.00408.x (Pubitemid 36720183)
46. GENCLONE: a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization. Haond A, Belkhir K, Mol Ecol Notes 2007 7 15 17 (Pubitemid 46046572)
47. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Peakall R, Smouse PE, Molecular Ecology Notes 2006 6 1 288 295 10.1111/j.1471-8286.2005.01155.x (Pubitemid 43373825)
48. R: A Language and Environment for Statistical Computing. R Development Core Team, Vienna: R Foundation for Statistical Computing 2009
49. Arlequin (version 3.0): An integrated software package for population genetics data analysis. Excoffier L, Laval G, Schneider S, Evol Bioinform Online 2005 1 47 50
50. Evolutionary stoichiometry: the role of food quality for clonal differentiation and hybrid maintenance in a Daphnia species complex. Seidendorf B, Boersma M, Schwenk K, Limnol Oceanogr 2007 52 385 394 10.4319/lo.2007.52.1. 0385 (Pubitemid 46972148)
51. Predator induced life history changes and the coexistence of five taxa in a Daphnia species complex. Spaak P, Vanoverbeke J, Boersma M, Oikos 2000 89 164 174 10.1034/j.1600-0706.2000.890118.x (Pubitemid 30186185)
52. The coexistence of hybrid and parental Daphnia: the role of parasites. Wolinska J, Bittner K, Ebert D, Spaak P, Proc R Soc B 2006 273 1977 1983 10.1098/rspb.2006.3523 16822760 (Pubitemid 46939937)
53. Spatial variation of Daphnia parasite load within individual waterbodies. Wolinska J, Seda J, Koerner H, Smilauer P, Petrusek A, J Plankton Res 2011 33 1284 1294 10.1093/plankt/fbr016
54. Seasonal shifts in genotype frequencies in the invasive cladoceran Daphnia lumholtzi in Lake Texoma, USA. Frisch D, Weider LJ, Freshw Biol 2010 55 1327 1336 10.1111/j.1365-2427.2009.02356.x
55. Genetic structure of cyclic parthenogenetic zooplankton populations-a conceptual framework. De Meester L, Vanoverbeke J, De Gelas K, Ortells R, Spaak P, Arch Hydrobiol 2006 167 217 244 10.1127/0003-9136/2006/0167-0217 (Pubitemid 44606796)
56. The clonal ecology of Daphnia magna. I. Temporal changes in the clonal structure of a natural population. Carvalho GR, Crisp DJ, J Anim Ecol 1987 56 453 468 10.2307/5060
57. Factors organizing and maintaining polymorphism in a cyclic parthenogenetic species-Daphnia pulex. Ruvinsky AO, Perelygin AA, Lobkov YI, Belyaev DK, Heredity 1986 57 15 22 10.1038/hdy.1986.81
58. Effects of duration of the planktonic phase on rotifer genetic diversity. Ortells R, Gámez A, Serra M, Arch Hydrobiol 2006 167 203 216 10.1127/0003-9136/2006/0167-0203 (Pubitemid 44606795)
59. Genetic structure of an aphid studied using microsatellites: Cyclic parthenogenesis, differentiated lineages and host specialization. Sunnucks P, DeBarro PJ, Lushai G, Maclean N, Hales D, Mol Ecol 1997 6 1059 1073 10.1046/j.1365-294X.1997.00280.x 9394464
60. Diversity of Daphnia galeata life history traits in a vertically structured environment. Machacek J, Seda J, J Plankton Res 2008 30 221 231
61. The maintenance of sex, clonal dynamics, and host-parasite coevolution in a mixed population of sexual and asexual snails. Jokela J, Dybdahl MF, Lively CM, Am Nat 2009 174 43 S53 10.1086/599080 19441961
62. Microevolution in predominantly clonal populations of pelagic Daphnia (Crustacea: Phyllopoda): Selection, exchange, and sex. Jacobs J, J Evol Biol 1990 3 257 282 10.1046/j.1420-9101.1990.3030257.x (Pubitemid 20427858)