FMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts

NeuroImage

Volumn 60, Issue 1, 2012, Pages 456-470

  O'Donnell, Lauren J ^a,b   Rigolo, Laura ^a   Norton, Isaiah ^a   Wells, William M ^a,b   Westin, Carl Fredrik ^a,b   Golby, Alexandra J ^a,b  

^a BRIGHAM AND WOMEN S HOSPITAL   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

Atlas; Diffusion MRI; Functional MRI; Neuroimaging; Structure function; White matter

Indexed keywords

ADULT; ANATOMIC LANDMARK; ANTERIOR COMMISSURE; ARCUATE FASCICULUS; ARTICLE; CASE REPORT; CEREBRAL PEDUNCLE; CONTROLLED STUDY; CORPUS CALLOSUM; DIAGONAL BAND OF BROCA; DIFFUSION TENSOR IMAGING; FEMALE; FUNCTIONAL LANDMARK; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; IMAGE ANALYSIS; LANDMARK DISTANCE MODEL; MALE; NERVE TRACT; NEUROIMAGING; NUCLEAR MAGNETIC RESONANCE IMAGING; PREDICTION; PRIORITY JOURNAL; PYRAMIDAL TRACT; STATISTICAL MODEL; STRUCTURAL LANDMARK; STRUCTURAL MAGNETIC RESONANCE IMAGING; WERNICKE AREA;

ADULT; BRAIN; BRAIN MAPPING; DIFFUSION TENSOR IMAGING; FEMALE; HUMANS; MAGNETIC RESONANCE IMAGING; MALE; MODELS, NEUROLOGICAL; NEURAL PATHWAYS;

EID: 84856112793     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2011.11.014     Document Type: Article

References (31)

1. Catani M., de Schotten T. A diffusion tensor imaging tractography atlas for virtual in vivo dissections. Cortex 2008, 44(8):1105-1132.
2. Durrleman S., Fillard P., Pennec X., Trouvé A., Ayache N. A statistical model of white matter fiber bundles based on currents. Lecture Notes in Computer Science 2009, vol. 5636:114-125. Springer-Verlag, URL. http://hal.inria.fr/inria-00502721/en/, J.L. Prince, D.L. Pham, K.J. Meyers (Eds.).
3. Fischl B., Salat D., Busa E., Albert M., Dieterich M., Haselgrove C., van der Kouwe A., Killiany R., Kennedy D., Klaveness S., et al. Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. Neuron 2002, 33(3):341-355.
4. Glasser M.F., Rilling J.K. DTI tractography of the human brain's language pathways. Cereb. Cortex 2008, 18(11):2471-2482.
5. Gong G., He Y., Concha L., Lebel C., Gross D.W., Evans A.C., Beaulieu C. Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diffusion tensor imaging tractography. Cereb. Cortex 2009, 19(3):524-536.
6. Goodlett C., Davis B., Jean R., Gilmore J., Gerig G. Improved correspondence for DTI population studies via unbiased atlas building. Lect. Notes Comput. Sci. 2006, 4191:260.
7. Greicius M.D., Supekar K., Menon V., Dougherty R.F. Resting-state functional connectivity reflects structural connectivity in the default mode network. Cereb. Cortex 2009, 19(1):72-78.
8. Håberg A., Kvistad K., Unsgård G., Haraldseth O. Preoperative blood oxygen level-dependent functional magnetic resonance imaging in patients with primary brain tumors: clinical application and outcome. Neurosurgery 2004, 54(4):902-915.
9. Hagler D., Ahmadi M., Kuperman J., Holland D., McDonald C., Halgren E., Dale A. Automated white-matter tractography using a probabilistic diffusion tensor atlas: application to temporal lobe epilepsy. Hum. Brain Mapp. 2009, 30(5):1535.
10. Holodny A.I., Watts R., Korneinko V.N., Pronin I.N., Zhukovskiy M.E., Gor D.M., Ulug A. Diffusion tensor tractography of the motor white matter tracts in man: Current controversies and future directions. Ann. N. Y. Acad. Sci. 2005, 1064:88-97.
11. Hua K., Oishi K., Zhang J., Wakana S., Yoshioka T., Zhang W., Akhter K.D., Li X., Huang H., Jiang H., van Zijl P., Mori S. Mapping of functional areas in the human cortex based on connectivity through association fibers. Cereb. Cortex 2008, (bhn215).
12. Hua K., Zhang J., Wakana S., Jiang H., Li X., Reich D., Calabresi P., Pekar J., van Zijl P., Mori S. Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification. Neuroimage 2008, 39(1):336-347.
13. Kamada K., Sawamura Y., Takeuchi F., Kawaguchi H., Kuriki S., Todo T., Morita A., Masutani Y., Aoki S., Kirino T. Functional identification of the primary motor area by corticospinal tractography. Neurosurgery 2005, 56:98-109.
14. Lele S., Richtsmeier J. Euclidean distance matrix analysis: a coordinate-free approach for comparing biological shapes using landmark data. Am. J. Phys. Anthropol. 1991, 86(3):415-427.
15. Maddah M., Grimson W., Warfield S., Wells W. A unified framework for clustering and quantitative analysis of white matter fiber tracts. Med. Image Anal. 2008, 12(2):191-202.
16. Mori S., Wakana S., Nagae-Poetscher L.M., van Zijl P.C. MRI Atlas of Human White Matter 2005, Elsevier.
17. Mori S., Oishi K., Jiang H., Jiang L., Li X., Akhter K., Hua K., Faria A.V., Mahmood A., Woods R., Toga A.W., Pike G.B., Neto P.R., Evans A., Zhang J., Huang H., Miller M.I., van Zijl P., Mazziotta J. Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template. Neuroimage 2008, 40(2):570-582.
18. O'Donnell L., Westin C.-F. Automatic tractography segmentation using a high-dimensional white matter atlas. IEEE Trans. Med. Imaging 2007, 26(11):1562-1575.
19. O'Donnell L.J., Rigolo L.E., Norton I., Westin C.-F., Golby A.J. Defining spatial relationships between fmri and dti fiber tracts. MICCAI Workshop on Diffusion Modeling and the Fibre Cup 2009.
20. O'Donnell L.J., Westin C.-F., Golby A.J. Tract-based morphometry for white matter group analysis. Neuroimage 2009, 45(3):832-844.
21. O'Shea J.P., Whalen S., Branco D.M., Petrovich N.M., Knierim K.E., Golby A.J. Integrated image- and function-guided surgery in eloquent cortex: a technique report. Int. J. Med. Robot. 2006, 2(1):75-83.
22. Pohl K., Fisher J., Grimson W., Kikinis R., Wells W. A Bayesian model for joint segmentation and registration. Neuroimage 2006, 31(1):228-239.
23. Rolls H.K., Yoo S.-S., Zou K.H., Golby A.J., Panych L.P. Rater-dependent accuracy in predicting the spatial location of functional centers on anatomical MR images. Clin. Neurol. Neurosurg. 2007, 109(3):225-235.
24. Schonberg T., Pianka P., Hendler T., Pasternak O., Assaf Y. Characterization of displaced white matter by brain tumors using combined DTI and fMRI. Neuroimage 2006, 30(4):1100-1111.
25. Skudlarski P., Jagannathan K., Calhoun V.D., Hampson M., Skudlarska B.A., Pearlson G. Measuring brain connectivity: diffusion tensor imaging validates resting state temporal correlations. Neuroimage 2008, 43(3):554-561.
26. Tucholka A., Thirion B., Pinel P., Poline J.-B., Mangin J.-F. Triangulating cortical functional networks with anatomical landmarks. ISBI 2008, 612-615.
27. Venkataraman A., Rathi Y., Kubicki M., Westin C.-F., Golland P. Joint generative model for fmri/dwi and its application to population studies. Med. Image Comput. Comput. Assis.t Interv. 2010, 13(Pt. 1):191-199.
28. Worsley K., Friston K. Analysis of fMRI time-series revisited-again. Neuroimage 1995, 2(3):173-181.
29. Yushkevich P.A., Zhang H., Simon T.J., Gee J.C. Structure-specific statistical mapping of white matter tracts. Neuroimage 2008, 41(2):448-461.
30. Zhang W., Olivi A., Hertig S., van Zijl P., Mori S. Automated fiber tracking of human brain white matter using diffusion tensor imaging. Neuroimage 2008, 42(2):771-777.
31. Ziyan U., Sabuncu M.R., O'Donnell L.J., Westin C.-F. Nonlinear registration of diffusion MR images based on fiber bundles. MICCAI 2007, 351-358.