Proteomic Analysis of PEG-Fractionated UV-C Stress-Response Proteins in Globe Artichoke

Plant Molecular Biology Reporter

Volumn 30, Issue 1, 2012, Pages 111-122

  Falvo, Sara ^a,b   Acquadro, Alberto ^a   Albo, Alessandra Giuliano ^b   America, Twan ^c   Lanteri, Sergio ^a  

^a UNIVERSITY OF TURIN   (Italy)

^b LIMA   (Italy)

^c WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

Abiotic stress; Globe artichoke; PEG fractionation; Proteomics

Indexed keywords

ASTERACEAE; CYNARA SCOLYMUS;

EID: 84856111076     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-011-0325-2     Document Type: Article

References (49)

1. Acquadro A, Falvo S, Mila S, Albo A, Comino C, Moglia A, Lanteri S (2009) Proteomics in globe artichoke: protein extraction and sample complexity reduction by PEG fractionation. Electrophoresis 30(9): 1594-1602.
2. Ahsan N, Lee D, Alam I et al (2008) Comparative proteomic study of arsenic-induced differentially expressed proteins in rice roots reveals glutathione plays a central role during As stress. Proteomics 8: 3561-3576.
3. Albo A, Mila S, Digilio G et al (2007) Proteomic analysis of a genetically modified maize flour carrying Cry1Ab gene and comparison to the corresponding wild-type. Maydica 52: 443-455.
4. Bian F, Zheng C, Qu F, Gong X, You C (2010) Proteomic analysis of somatic embryogenesis in Cyclamen persicum Mill. Plant Mol Biol Report 28(1): 22-31.
5. Bollenbach T, Sharwood R, Gutierrez R et al (2009) The RNA-binding proteins CSP41a and CSP41b may regulate transcription and translation of chloroplast-encoded RNAs in Arabidopsis. Plant Mol Biol 69: 541-552.
6. Braam J (1992) Regulation of expression of calmodulin and calmodulin-related genes by environmental stimuli in plants. Cell Calcium 13: 457-463.
7. Braam J, Davis R (1990) Rain-induced, wind-induced, and touch-induced expression of calmodulin and calmodulin-related genes in Arabidopsis. Cell 60: 357-364.
8. Bradford M (1976) A rapid and sensitive method for quantitation of microgram quantities of protein utilizing the principle of protein-dye-binding. Anal Biochem 72: 248-254.
9. Casati P, Zhang X, Burlingame AL, Walbot V (2005) Analysis of leaf proteome after UV-B irradiation in maize lines differing in sensitivity. Mol Cell Proteomics 4: 1673-1685.
10. Cho S, Kim J, Park J et al (2006) Constitutive expression of abiotic stress-inducible hot pepper CaXTH3, which encodes a xyloglucan endotransglucosylase/hydrolase homolog, improves drought and salt tolerance in transgenic Arabidopsis plants. FEBS Lett 580: 3136-3144.
11. Conesa A, Gotz S, Garcia-Gomez J, Terol J, Talon M, Robles M (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21(18): 3674-3676.
12. Coohill T (1999) Conventional UV-visible sources. Photochem Photobiol 69: 15S.
13. Damerval C, De Vienne D, Zivy MHT (1986) Technical improvements in two-dimensional electrophoresis increase the level of genetic variation detected in wheat-seedling proteins. Electrophoresis 7: 52-54.
14. Ding C, You J, Liu Z, Rehmani MIA, Wang S, Li G, Wang Q, Ding Y (2011) Proteomic analysis of low nitrogen stress-responsive proteins in roots of rice. Plant Mol Biol Report. doi: 10. 1007/s11105-010-0268-z.
15. Dong M, Zhang X, Zhuang Z, Zou J, Ye N, Xu D, Mou S, Liang C, Wang W (2011) Characterization of the LhcSR gene under light and temperature stress in the green alga Ulva linza. Plant Mol Biol Report. doi: 10. 1007/s11105-011-0311-8.
16. Du HM, Liang Y, Pei KQ, Ma K (2011) UV radiation-responsive proteins in rice leaves: a proteomic analysis. Plant Cell Physiol 52(2): 306-316.
17. Feng L, Wang K, Li Y et al (2007) Overexpression of SBPase enhances photosynthesis against high temperature stress in transgenic rice plants. Plant Cell Rep 26: 1635-1646.
18. Iliev E, Xu W, Polisensky D et al (2002) Transcriptional and posttranscriptional regulation of Arabidopsis TCH4 expression by diverse stimuli. Roles of cis regions and brassinosteroids. Plant Physiol 130: 770-783.
19. Jellouli N, Jouira HB, Daldoul S, Chenennaoui S, Ghorbel A, Salem AB, Gargouri A (2010) Proteomic and transcriptomic analysis of grapevine pr10 expression during salt stress and functional characterization in yeast. Plant Mol Biol Report 28(1): 1-8.
20. Kaspar S, Matros A, Mock HP (2010) Proteome and flavonoid analysis reveals distinct responses of epidermal tissue and whole leaves upon UV-B Radiation of barley (Hordeum vulgare L.) seedlings. J Proteome Res 9(5): 2402-2411.
21. Kasprzewska A (2003) Plant chitinases-regulation and function. Cell Mol Biol Lett 8: 809-824.
22. Kun W, Feng G, Renshan Z, Shaoqing L, Yingguo Z (2011) Expression, purification, and secondary structure prediction of pentatricopeptide repeat protein RF1A from rice). Plant Mol Biol Report. doi: 10. 1007/s11105-010-0260-7.
23. Kuun K, Okole B, Bornman L (2001) Protection of phenylpropanoid metabolism by prior heat treatment in Lycopersicon esculentum exposed to Ralstonia solanacearum. Plant Physiol Biochem 39: 871-880.
24. Lefebvre S, Lawson T, Zakhleniuk O et al (2005) Increased sedoheptulose-1, 7-bisphosphatase activity in transgenic tobacco plants stimulates photosynthesis and growth from an early stage in development. Plant Physiol 138: 451-460.
25. Li D, Staehelin C, Wang W, Peng S (2010) Molecular cloning and characterization of a chitinase-homologous gene from Mikania micrantha infected by Cuscuta campestris. Plant Mol Biol Report 28(1): 90-101.
26. Michiels A, van Laere A, van den Ende W et al (2004) Expression analysis of a chicory fructan 1-exohydrolase gene reveals complex regulation by cold. J Exp Bot 55: 1325-1333.
27. Miyagawa Y, Tamoi M, Shigeoka S (2001) Overexpression of a cyanobacterial fructose-1, 6-/sedoheptulose-1, 7-bisphosphatase in tobacco enhances photosynthesis and growth. Nat Biotechnol 19: 965-969.
28. Moglia A, Lanteri S, Comino C, Acquadro A, de Vos R, Beekwilder J (2008) Stress-induced biosynthesis of dicaffeoylquinic acids in globe artichoke. J Agric Food Chem 56(18): 8641-8649.
29. Moon Y, Wang X, Morris M (2006) Dietary flavonoids: effects on xenobiotic and carcinogen metabolism. Toxicol in Vitro 20: 187-210.
30. Petit A, Baillieul F, Vaillant-Gaveau N et al (2009) Low responsiveness of grapevine flowers and berries at fruit set to UV-C irradiation. J Exp Bot 60: 1155-1162.
31. Polisensky D, Braam J (1996) Cold-shock regulation of the arabidopsis TCH genes and the effects of modulating intracellular calcium levels. Plant Physiol 11: 1271-1279.
32. Qian L, Wenyu Y, Xiaoping Y, Songlin R, Haifeng C, Huasheng M, Zihong Y (2011) A preliminary study on proteome variations associated with gall formation in Zizania latifolia Trucs). Plant Mol Biol Report 29(2): 360-368.
33. Ramnani PGE, Bingham M, van Bruggen P, Tuohy KM, Gibson GR (2010) Prebiotic effect of fruit and vegetable shots containing Jerusalem artichoke inulin: a human intervention study. Br J Nutr 1: 1-8.
34. Regalado A, Pinheiro C, Vidal S et al (2000) The Lupinus albus class-III chitinase gene, IF3, is constitutively expressed in vegetative organs and developing seeds. Planta 210: 543-550.
35. Righetti P, Boschetti E (2007) Sherlock Holmes and the proteome-a detective story. FEBS J 274(4): 897-905.
36. Ronkart S, Blecker C, Fourmanoir H et al (2007) Isolation and identification of inulooligosaccharides resulting from inulin hydrolysis. Anal Chim Acta 604: 81-87.
37. Scaglione D, Acquadro A, Portis E, Taylor CA, Lanteri S, Knapp SJ (2009) Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database. BMC Genomics 10(1): 454.
38. Shevchenko A, Tomas H, Havlis J et al (2006) In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat Protoc 1: 2856-2860.
39. Singh A, Sarkar A, Singh S et al (2010) Investigation of supplemental ultraviolet-B-induced changes in antioxidative defense system and leaf proteome in radish (Raphanus sativus L. cv Truthful): an insight to plant response under high oxidative stress. Protoplasma 245: 75-83.
40. Stapletons A (1992) Ultraviolet-radiation and plants-burning questions. Plant Cell 4: 1353-1358.
41. Timperio A, Egidi M, Zolla L (2008) Proteomics applied on plant abiotic stresses: role of heat shock proteins (HSP). J Proteomics 71: 391-411.
42. van den Ende W, De Coninck B, van Laere A (2004) Plant fructan exohydrolases: a role in signaling and defense? Trends Plant Sci 9: 523-528.
43. Wang M, Simon J, Aviles I, He K, Zheng Q, Tadmor Y (2003) Analysis of antioxidative phenolic compounds in artichoke (Cynara scolymus L.). J Agric Food Chem 51(3): 601-608.
44. Wang W, Vinocur B, Shoseyov O et al (2004) Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response. Trends Plant Sci 9: 244-252.
45. Winkel B (2004) Metabolic channeling in plants. Annu Rev Plant Biol 55: 85-107.
46. Xu C, Sullivan JH, Garrett WM, Caperna TJ, Natarajan S (2008) Impact of solar ultraviolet-B on the proteome in soybean lines differing in flavonoid contents. Phytochemistry 69(1): 38-48.
47. Yamamori A, Onodera S, Kikuchi M et al (2002) Two novel oligosaccharides formed by 1(F)-fructosyltransferase purified from roots of asparagus (Asparagus officinalis L.). Biosci Biotechnol Biochem 66: 1419-1422.
48. Yang Q, Wang Y, Zhang J et al (2007) Identification of aluminum-responsive proteins in rice roots by a proteomic approach: cysteine synthase as a key player in Al response. Proteomics 7: 737-749.
49. Zhang J, Sun L, Liu L, Lian J, An S, Wang X, Zhang J, Jin J, Li S, Xi J (2010) Proteomic analysis of interactions between the generalist herbivore Spodoptera exigua (Lepidoptera: Noctuidae) and Arabidopsis thaliana. Plant Mol Biol Report 28(2): 324-333.