-
1
-
-
33947428398
-
Enzymatic defects of the nsP2 proteins of Semliki Forest virus temperature-sensitive mutants
-
Balistreri G, Caldentey J, Kääriäinen L, Ahola T. 2007. Enzymatic defects of the nsP2 proteins of Semliki Forest virus temperature-sensitive mutants. J. Virol. 81:2849 -2860.
-
(2007)
J. Virol.
, vol.81
, pp. 2849-2860
-
-
Balistreri, G.1
Caldentey, J.2
Kääriäinen, L.3
Ahola, T.4
-
2
-
-
2442672522
-
Regulation of picornavirus gene expression
-
Bedard KM, Semler BL. 2004. Regulation of picornavirus gene expression. Microbes Infect. 6:702-713.
-
(2004)
Microbes Infect
, vol.6
, pp. 702-713
-
-
Bedard, K.M.1
Semler, B.L.2
-
3
-
-
0036388978
-
Inhibiting viral proteases: challenges and opportunities
-
Bianchi E, Pessi A. 2002. Inhibiting viral proteases: challenges and opportunities. Biopolymers 66:101-114.
-
(2002)
Biopolymers
, vol.66
, pp. 101-114
-
-
Bianchi, E.1
Pessi, A.2
-
4
-
-
22544469092
-
Ratcheting of the substrate from the zymogen to proteinase conformations directs the sequential cleavage of prothrombin by prothrombinase
-
Bianchini EP, Orcutt SJ, Panizzi P, Bock PE, Krishnaswamy S. 2005. Ratcheting of the substrate from the zymogen to proteinase conformations directs the sequential cleavage of prothrombin by prothrombinase. Proc. Natl. Acad. Sci. U. S. A. 102:10099 -10104.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 10099-10104
-
-
Bianchini, E.P.1
Orcutt, S.J.2
Panizzi, P.3
Bock, P.E.4
Krishnaswamy, S.5
-
5
-
-
34250778996
-
Exosites in the substrate specificity of blood coagulation reactions
-
Bock PE, Panizzi P, Verhamme IM. 2007. Exosites in the substrate specificity of blood coagulation reactions. J. Thromb. Haemost. 5(Suppl. 1):81-94.
-
(2007)
J. Thromb. Haemost.
, vol.5
, Issue.SUPPL.1
, pp. 81-94
-
-
Bock, P.E.1
Panizzi, P.2
Verhamme, I.M.3
-
6
-
-
0029007414
-
Characterization ofthe leader papain-like proteinase of MHV-A59: identification of a new in vitro cleavage site
-
Bonilla PJ, Hughes SA, Piñón JD, Weiss SR. 1995. Characterization ofthe leader papain-like proteinase of MHV-A59: identification of a new in vitro cleavage site. Virology 209:489-497.
-
(1995)
Virology
, vol.209
, pp. 489-497
-
-
Bonilla, P.J.1
Hughes, S.A.2
Piñón, J.D.3
Weiss, S.R.4
-
7
-
-
33747138073
-
The rubella virus nonstructural protease recognizes itself via an internal sequence present upstream of the cleavage site for trans-activity
-
Chen HH, Stark CJ, Atreya CD. 2006. The rubella virus nonstructural protease recognizes itself via an internal sequence present upstream of the cleavage site for trans-activity. Arch. Virol. 151:1841-1851.
-
(2006)
Arch. Virol.
, vol.151
, pp. 1841-1851
-
-
Chen, H.H.1
Stark, C.J.2
Atreya, C.D.3
-
8
-
-
0025352629
-
Cleavage-site preferences of Sindbis virus polyproteins containing the non-structural proteinase Evidence for temporal regulation of polyprotein processing in vivo
-
De Groot RJ, Hardy WR, Shirako Y, Strauss JH. 1990. Cleavage-site preferences of Sindbis virus polyproteins containing the non-structural proteinase. Evidence for temporal regulation of polyprotein processing in vivo. EMBO J. 9:2631-2638.
-
(1990)
EMBO J
, vol.9
, pp. 2631-2638
-
-
De Groot, R.J.1
Hardy, W.R.2
Shirako, Y.3
Strauss, J.H.4
-
9
-
-
0029914251
-
Crystal structure of the human adenovirus proteinase with its 11 amino acid cofactor
-
Ding J, McGrath WJ, Sweet RM, Mangel WF. 1996. Crystal structure of the human adenovirus proteinase with its 11 amino acid cofactor. EMBO J. 15:1778 -1783.
-
(1996)
EMBO J
, vol.15
, pp. 1778-1783
-
-
Ding, J.1
McGrath, W.J.2
Sweet, R.M.3
Mangel, W.F.4
-
10
-
-
0027138172
-
Expression of virus-encoded proteinases: functional and structural similarities with cellular enzymes
-
Dougherty WG, Semler BL. 1993. Expression of virus-encoded proteinases: functional and structural similarities with cellular enzymes. Microbiol. Rev. 57:781- 822.
-
(1993)
Microbiol. Rev.
, vol.57
, pp. 781-822
-
-
Dougherty, W.G.1
Semler, B.L.2
-
11
-
-
77956310878
-
Emerging principles in protease-based drug discovery
-
Drag M, Salvesen GS. 2010. Emerging principles in protease-based drug discovery. Nat. Rev. Drug Discov. 9:690 -701.
-
(2010)
Nat. Rev. Drug Discov.
, vol.9
, pp. 690-701
-
-
Drag, M.1
Salvesen, G.S.2
-
12
-
-
0018374348
-
Heterologous interference in Aedes albopictus cells infected with alphaviruses
-
Eaton BT. 1979. Heterologous interference in Aedes albopictus cells infected with alphaviruses. J. Virol. 30:45-55.
-
(1979)
J. Virol.
, vol.30
, pp. 45-55
-
-
Eaton, B.T.1
-
13
-
-
33745025763
-
Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus
-
Erbel P, et al. 2006. Structural basis for the activation of flaviviral NS3 proteases from dengue and West Nile virus. Nat. Struct. Mol. Biol. 13: 372-373.
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 372-373
-
-
Erbel, P.1
-
14
-
-
78449246194
-
Mechanisms of macromolecular protease inhibitors
-
Farady CJ, Craik CS. 2010. Mechanisms of macromolecular protease inhibitors. Chembiochem 11:2341-2346.
-
(2010)
Chembiochem
, vol.11
, pp. 2341-2346
-
-
Farady, C.J.1
Craik, C.S.2
-
15
-
-
18944384457
-
The binding of foot-andmouth disease virus leader proteinase to eIF4GI involves conserved ionic interactions
-
Foeger N, Kuehnel E, Cencic R, Skern T. 2005. The binding of foot-andmouth disease virus leader proteinase to eIF4GI involves conserved ionic interactions. FEBS J. 272:2602-2611.
-
(2005)
FEBS J
, vol.272
, pp. 2602-2611
-
-
Foeger, N.1
Kuehnel, E.2
Cencic, R.3
Skern, T.4
-
17
-
-
78049491884
-
Functional Sindbis virus replicative complexes are formed at the plasma membrane
-
Frolova EI, Gorchakov R, Pereboeva L, Atasheva S, Frolov I. 2010. Functional Sindbis virus replicative complexes are formed at the plasma membrane. J. Virol. 84:11679 -11695.
-
(2010)
J. Virol.
, vol.84
, pp. 11679-11695
-
-
Frolova, E.I.1
Gorchakov, R.2
Pereboeva, L.3
Atasheva, S.4
Frolov, I.5
-
18
-
-
10644282148
-
The protein structures that shape caspase activity, specificity, activation and inhibition
-
Fuentes-Prior P, Salvesen GS. 2004. The protein structures that shape caspase activity, specificity, activation and inhibition. Biochem. J. 384: 201-232.
-
(2004)
Biochem. J.
, vol.384
, pp. 201-232
-
-
Fuentes-Prior, P.1
Salvesen, G.S.2
-
19
-
-
33744937066
-
Sindbis virus nonstructural protein nsP2 is cytotoxic and inhibits cellular transcription
-
Garmashova N, Gorchakov R, Frolova E, Frolov I. 2006. Sindbis virus nonstructural protein nsP2 is cytotoxic and inhibits cellular transcription. J. Virol. 80:5686 -5696.
-
(2006)
J. Virol.
, vol.80
, pp. 5686-5696
-
-
Garmashova, N.1
Gorchakov, R.2
Frolova, E.3
Frolov, I.4
-
20
-
-
33847199327
-
The Old World and New World alphaviruses use different virus-specific proteins for induction of transcriptional shutoff
-
Garmashova N, et al. 2007. The Old World and New World alphaviruses use different virus-specific proteins for induction of transcriptional shutoff. J. Virol. 81:2472-2484.
-
(2007)
J. Virol.
, vol.81
, pp. 2472-2484
-
-
Garmashova, N.1
-
21
-
-
32344448603
-
Characterization of the cysteine protease domain of Semliki Forest virus replicase protein nsP2 by in vitro mutagenesis
-
Golubtsov A, Kääriäinen L, Caldentey J. 2006. Characterization of the cysteine protease domain of Semliki Forest virus replicase protein nsP2 by in vitro mutagenesis. FEBS Lett. 580:1502-1508.
-
(2006)
FEBS Lett
, vol.580
, pp. 1502-1508
-
-
Golubtsov, A.1
Kääriäinen, L.2
Caldentey, J.3
-
22
-
-
0025739985
-
Putative papain-related thiol proteases of positive-strand RNA viruses. Identification of rubi- and aphthovirus proteases and delineation of a novel conserved domain associated with proteases of rubi-, alpha- and coronaviruses
-
Gorbalenya AE, Koonin EV, Lai MM. 1991. Putative papain-related thiol proteases of positive-strand RNA viruses. Identification of rubi- and aphthovirus proteases and delineation of a novel conserved domain associated with proteases of rubi-, alpha- and coronaviruses. FEBS Lett. 288: 201-205.
-
(1991)
FEBS Lett
, vol.288
, pp. 201-205
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
Lai, M.M.3
-
23
-
-
45749090147
-
A new role for ns polyprotein cleavage in Sindbis virus replication
-
Gorchakov R, et al. 2008. A new role for ns polyprotein cleavage in Sindbis virus replication. J. Virol. 82:6218-6231.
-
(2008)
J. Virol.
, vol.82
, pp. 6218-6231
-
-
Gorchakov, R.1
-
24
-
-
53749083590
-
Different types of nsP3-containing protein complexes in Sindbis virus-infected cells
-
Gorchakov R, Garmashova N, Frolova E, Frolov I. 2008. Different types of nsP3-containing protein complexes in Sindbis virus-infected cells. J. Virol. 82:10088 -10101.
-
(2008)
J. Virol.
, vol.82
, pp. 10088-10101
-
-
Gorchakov, R.1
Garmashova, N.2
Frolova, E.3
Frolov, I.4
-
25
-
-
3543049963
-
PKR-dependent and -independent mechanisms are involved in translational shutoff during Sindbis virus infection
-
Gorchakov R, Frolova E, Williams BR, Rice CM, Frolov I. 2004. PKR-dependent and -independent mechanisms are involved in translational shutoff during Sindbis virus infection. J. Virol. 78:8455- 8467.
-
(2004)
J. Virol.
, vol.78
, pp. 8455-8467
-
-
Gorchakov, R.1
Frolova, E.2
Williams, B.R.3
Rice, C.M.4
Frolov, I.5
-
26
-
-
36349026346
-
Restricted active site docking by enzyme-bound substrate enforces the ordered cleavage of prothrombin by prothrombinase
-
Hacisalihoglu A, Panizzi P, Bock PE, Camire RM, Krishnaswamy S. 2007. Restricted active site docking by enzyme-bound substrate enforces the ordered cleavage of prothrombin by prothrombinase. J. Biol. Chem. 282:32974 -32982.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 32974-32982
-
-
Hacisalihoglu, A.1
Panizzi, P.2
Bock, P.E.3
Camire, R.M.4
Krishnaswamy, S.5
-
27
-
-
0024358586
-
Mapping of RNA- temperaturesensitive mutants of Sindbis virus: assignment of complementation groups A, B, and G to nonstructural proteins
-
Hahn YS, Strauss EG, Strauss JH. 1989. Mapping of RNA- temperaturesensitive mutants of Sindbis virus: assignment of complementation groups A, B, and G to nonstructural proteins. J. Virol. 63:3142-3150.
-
(1989)
J. Virol.
, vol.63
, pp. 3142-3150
-
-
Hahn, Y.S.1
Strauss, E.G.2
Strauss, J.H.3
-
28
-
-
0023972122
-
Processing of the nonstructural polyproteins of Sindbis virus: study of the kinetics in vivo using monoclonal antibodies
-
Hardy WR, Strauss JH. 1988. Processing of the nonstructural polyproteins of Sindbis virus: study of the kinetics in vivo using monoclonal antibodies. J. Virol. 62:998 -1007.
-
(1988)
J. Virol.
, vol.62
, pp. 998-1007
-
-
Hardy, W.R.1
Strauss, J.H.2
-
29
-
-
0024421374
-
Processing the nonstructural polyproteins of Sindbis virus: nonstructural proteinase is in the C-terminal half of nsP2 and functions both in cis and in trans
-
Hardy WR, Strauss JH. 1989. Processing the nonstructural polyproteins of Sindbis virus: nonstructural proteinase is in the C-terminal half of nsP2 and functions both in cis and in trans. J. Virol. 63:4653- 4664.
-
(1989)
J. Virol.
, vol.63
, pp. 4653-4664
-
-
Hardy, W.R.1
Strauss, J.H.2
-
30
-
-
0025277442
-
Synthesis and processing of the nonstructural polyproteins of several temperature-sensitive mutants of Sindbis virus
-
Hardy WR, Hahn YS, de Groot RJ, Strauss EG, Strauss JH. 1990. Synthesis and processing of the nonstructural polyproteins of several temperature-sensitive mutants of Sindbis virus. Virology 177:199 -208.
-
(1990)
Virology
, vol.177
, pp. 199-208
-
-
Hardy, W.R.1
Hahn, Y.S.2
de Groot, R.J.3
Strauss, E.G.4
Strauss, J.H.5
-
31
-
-
0036371127
-
Functions of alphavirus nonstructural proteins in RNA replicationProg
-
Kääriäinen L, Ahola T. 2002. Functions of alphavirus nonstructural proteins in RNA replication. Prog. Nucleic Acid Res. Mol. Biol. 71:187-222.
-
(2002)
Nucleic Acid Res. Mol. Biol.
, vol.71
, pp. 187-222
-
-
Kääriäinen, L.1
Ahola, T.2
-
32
-
-
0030791710
-
Superinfection exclusion of alphavirus in three mosquito cell lines persistently infected with Sindbis virus
-
Karpf AR, Lenches E, Strauss EG, Strauss JH. 1997. Superinfection exclusion of alphavirus in three mosquito cell lines persistently infected with Sindbis virus. J. Virol. 71:7119 -7123.
-
(1997)
J. Virol.
, vol.71
, pp. 7119-7123
-
-
Karpf, A.R.1
Lenches, E.2
Strauss, E.G.3
Strauss, J.H.4
-
33
-
-
16044364658
-
Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide
-
Kim JL, et al. 1996. Crystal structure of the hepatitis C virus NS3 protease domain complexed with a synthetic NS4A cofactor peptide. Cell 87: 343-355.
-
(1996)
Cell
, vol.87
, pp. 343-355
-
-
Kim, J.L.1
-
34
-
-
2542484464
-
Regulation of Semliki Forest virusRNAreplication: a model for the control of alphavirus pathogenesis in invertebrate hosts
-
Kim KH, Rümenapf T, Strauss EG, Strauss JH. 2004. Regulation of Semliki Forest virusRNAreplication: a model for the control of alphavirus pathogenesis in invertebrate hosts. Virology 323:153-163.
-
(2004)
Virology
, vol.323
, pp. 153-163
-
-
Kim, K.H.1
Rümenapf, T.2
Strauss, E.G.3
Strauss, J.H.4
-
35
-
-
0035478958
-
Immunity proteins: enzyme inhibitors that avoid the active site
-
Kleanthous C, Walker D. 2001. Immunity proteins: enzyme inhibitors that avoid the active site. Trends Biochem. Sci. 26:624-631.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 624-631
-
-
Kleanthous, C.1
Walker, D.2
-
36
-
-
17644371341
-
Exosite-driven substrate specificity and function in coagulation
-
Krishnaswamy S. 2005. Exosite-driven substrate specificity and function in coagulation. J. Thromb. Haemost. 3:54-67.
-
(2005)
J. Thromb. Haemost.
, vol.3
, pp. 54-67
-
-
Krishnaswamy, S.1
-
37
-
-
0027475009
-
Roles of nonstructural polyproteins and cleavage products in regulating Sindbis virus RNA replication and transcription
-
Lemm JA, Rice CM. 1993. Roles of nonstructural polyproteins and cleavage products in regulating Sindbis virus RNA replication and transcription. J. Virol. 67:1916 -1926.
-
(1993)
J. Virol.
, vol.67
, pp. 1916-1926
-
-
Lemm, J.A.1
Rice, C.M.2
-
38
-
-
0028221438
-
Polypeptide requirements for assembly of functional Sindbis virus replication complexes: a model for the temporal regulation of minus- and plus-strand RNA synthesis
-
Lemm JA, Rümenapf T, Strauss EG, Strauss JH, Rice CM. 1994. Polypeptide requirements for assembly of functional Sindbis virus replication complexes: a model for the temporal regulation of minus- and plus-strand RNA synthesis. EMBO J. 13:2925-2934.
-
(1994)
EMBO J
, vol.13
, pp. 2925-2934
-
-
Lemm, J.A.1
Rümenapf, T.2
Strauss, E.G.3
Strauss, J.H.4
Rice, C.M.5
-
39
-
-
0031878237
-
Template-dependent initiation of Sindbis virus RNA replication in vitro
-
Lemm JA, Bergqvist A, Read CM, Rice CM. 1998. Template-dependent initiation of Sindbis virus RNA replication in vitro. J. Virol. 72: 6546-6553.
-
(1998)
J. Virol.
, vol.72
, pp. 6546-6553
-
-
Lemm, J.A.1
Bergqvist, A.2
Read, C.M.3
Rice, C.M.4
-
40
-
-
0034117086
-
Rubella virus nonstructural protein protease domains involved in trans- and cis-cleavage activities
-
Liang Y, Yao J, Gillam S. 2000. Rubella virus nonstructural protein protease domains involved in trans- and cis-cleavage activities. J. Virol. 74:5412-5423.
-
(2000)
J. Virol.
, vol.74
, pp. 5412-5423
-
-
Liang, Y.1
Yao, J.2
Gillam, S.3
-
41
-
-
0025912001
-
In vitro mutagenesis of a full-length cDNA clone of Semliki Forest virus: the small 6 000-molecular-weight membrane protein modulates virus release
-
Liljeström P, Lusa S, Huylebroeck D, Garoff H. 1991. In vitro mutagenesis of a full-length cDNA clone of Semliki Forest virus: the small 6,000-molecular-weight membrane protein modulates virus release. J. Virol. 65: 4107-4113.
-
(1991)
J. Virol.
, vol.65
, pp. 4107-4113
-
-
Liljeström, P.1
Lusa, S.2
Huylebroeck, D.3
Garoff, H.4
-
42
-
-
58949098779
-
Using specificity to strategically target proteases
-
Lim MD, Craik CS. 2009. Using specificity to strategically target proteases. Bioorg. Med. Chem. 17:1094 -1100.
-
(2009)
Bioorg. Med. Chem.
, vol.17
, pp. 1094-1100
-
-
Lim, M.D.1
Craik, C.S.2
-
43
-
-
34748873170
-
Flaviviridae: the viruses and their replication
-
D. M. Knipe and P. M. Howley (ed. ). Lippincott Williams & Wilkins, Philadelphia, PA
-
Lindenbach BD, Thiel HJ, Rice CM. 2007. Flaviviridae: the viruses and their replication, p. 1101-1152. In D. M. Knipe and P. M. Howley (ed.), Fields virology, Lippincott Williams & Wilkins, Philadelphia, PA.
-
(2007)
Fields virology
, pp. 1101-1152
-
-
Lindenbach, B.D.1
Thiel, H.J.2
Rice, C.M.3
-
44
-
-
0036302814
-
Protease degradomics: a new challenge for proteomics
-
López-Otín C, Overall CM. 2002. Protease degradomics: a new challenge for proteomics. Nat. Rev. Mol. Cell Biol. 3:509 -519.
-
(2002)
Nat. Rev. Mol. Cell Biol.
, vol.3
, pp. 509-519
-
-
López-Otín, C.1
Overall, C.M.2
-
45
-
-
33646721756
-
Molecular determinants of substrate specifity for Semliki Forest virus nonstructural protease
-
Lulla A, Lulla V, Tints K, Ahola T, Merits A. 2006. Molecular determinants of substrate specifity for Semliki Forest virus nonstructural protease. J. Virol. 80:5413-5422.
-
(2006)
J. Virol.
, vol.80
, pp. 5413-5422
-
-
Lulla, A.1
Lulla, V.2
Tints, K.3
Ahola, T.4
Merits, A.5
-
46
-
-
79957944066
-
Update 1 of: Proteases universally recognize beta strands in their active sites
-
Madala PK, Tyndall JD, Nall T, Fairlie DP. 2010. Update 1 of: Proteases universally recognize beta strands in their active sites. Chem. Rev. 110: PR1-P31.
-
(2010)
Chem. Rev.
, vol.110
-
-
Madala, P.K.1
Tyndall, J.D.2
Nall, T.3
Fairlie, D.P.4
-
47
-
-
69249209904
-
Fate of minus-strand templates and replication complexes produced by a p23-cleavage-defective mutant of Sindbis virus
-
Mai J, Sawicki SG, Sawicki DL. 2009. Fate of minus-strand templates and replication complexes produced by a p23-cleavage-defective mutant of Sindbis virus. J. Virol. 83:8553- 8564.
-
(2009)
J. Virol.
, vol.83
, pp. 8553-8564
-
-
Mai, J.1
Sawicki, S.G.2
Sawicki, D.L.3
-
48
-
-
67449102614
-
The crystal structure of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket
-
Malet H, et al. 2009. The crystal structure of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket. J. Virol. 83:6534-6545.
-
(2009)
J. Virol.
, vol.83
, pp. 6534-6545
-
-
Malet, H.1
-
49
-
-
0035057147
-
Proteolytic processing of Semliki Forest virus-specific non-structural polyprotein by nsP2 protease
-
Merits A, Vasiljeva L, Ahola T, Kääriäinen L, Auvinen P. 2001. Proteolytic processing of Semliki Forest virus-specific non-structural polyprotein by nsP2 protease. J. Gen. Virol. 82:765-773.
-
(2001)
J. Gen. Virol.
, vol.82
, pp. 765-773
-
-
Merits, A.1
Vasiljeva, L.2
Ahola, T.3
Kääriäinen, L.4
Auvinen, P.5
-
50
-
-
0025513605
-
Product review New mammalian expression vectors
-
Moss B, Elroy-Stein O, Mizukami T, Alexander WA, Fuerst TR. 1990. Product review. New mammalian expression vectors. Nature 348:91-92.
-
(1990)
Nature
, vol.348
, pp. 91-92
-
-
Moss, B.1
Elroy-Stein, O.2
Mizukami, T.3
Alexander, W.A.4
Fuerst, T.R.5
-
51
-
-
48549102413
-
Elucidating the function of non catalytic domains of collagenases and aggrecanases
-
Nagase H, Fushimi K. 2008. Elucidating the function of non catalytic domains of collagenases and aggrecanases. Connect Tissue Res. 49: 169-174.
-
(2008)
Connect Tissue Res
, vol.49
, pp. 169-174
-
-
Nagase, H.1
Fushimi, K.2
-
52
-
-
0036741135
-
Molecular determinants of metalloproteinase substrate specificity: matrix metalloproteinase substrate binding domains, modules, and exosites
-
Overall CM. 2002. Molecular determinants of metalloproteinase substrate specificity: matrix metalloproteinase substrate binding domains, modules, and exosites. Mol. Biotechnol. 22:51- 86.
-
(2002)
Mol. Biotechnol.
, vol.22
, pp. 51-86
-
-
Overall, C.M.1
-
53
-
-
0028871804
-
How to measure and predict the molar absorption coefficient of a protein
-
Pace CN, Vajdos F, Fee L, Grimsley G, Gray T. 1995. How to measure and predict the molar absorption coefficient of a protein. Protein Sci. 4:2411-2423.
-
(1995)
Protein Sci
, vol.4
, pp. 2411-2423
-
-
Pace, C.N.1
Vajdos, F.2
Fee, L.3
Grimsley, G.4
Gray, T.5
-
54
-
-
0025331987
-
Nuclear localization of Semliki Forest virus-specific nonstructural protein nsP2
-
Peränen J, Rikkonen M, Liljestöm P, Kääriäinen L. 1990. Nuclear localization of Semliki Forest virus-specific nonstructural protein nsP2. J. Virol. 64:1888 -1896.
-
(1990)
J. Virol.
, vol.64
, pp. 1888-1896
-
-
Peränen, J.1
Rikkonen, M.2
Liljestöm, P.3
Kääriäinen, L.4
-
55
-
-
0029983371
-
T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli
-
Peränen J, Rikkonen M, Hyvönen M, Kääriäinen L. 1996. T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli. Anal. Biochem. 236:371-373.
-
(1996)
Anal. Biochem.
, vol.236
, pp. 371-373
-
-
Peränen, J.1
Rikkonen, M.2
Hyvönen, M.3
Kääriäinen, L.4
-
56
-
-
23244441900
-
Ordered processing of the human immunodeficiency virus type 1 GagPol precursor is influenced by the context of the embedded viral protease
-
Pettit SC, Clemente JC, Jeung JA, Dunn BM, Kaplan AH. 2005. Ordered processing of the human immunodeficiency virus type 1 GagPol precursor is influenced by the context of the embedded viral protease. Society 79: 10601-10607.
-
(2005)
Society
, vol.79
, pp. 10601-10607
-
-
Pettit, S.C.1
Clemente, J.C.2
Jeung, J.A.3
Dunn, B.M.4
Kaplan, A.H.5
-
57
-
-
75349110581
-
Structure-based discovery of small molecules targeting different surfaces of protein-kinase CK2
-
Prudent R, Sautel CF, Cochet C. 2010. Structure-based discovery of small molecules targeting different surfaces of protein-kinase CK2. Bioch. Bioph. Acta 1804:493- 498.
-
(2010)
Bioch. Bioph. Acta
, vol.1804
, pp. 493-498
-
-
Prudent, R.1
Sautel, C.F.2
Cochet, C.3
-
58
-
-
33746300776
-
Protein-protein interaction through betastrand addition
-
Remaut H, Waksman G. 2006. Protein-protein interaction through betastrand addition. Trends Biochem. Sci. 8:436-444.
-
(2006)
Trends Biochem. Sci.
, vol.8
, pp. 436-444
-
-
Remaut, H.1
Waksman, G.2
-
59
-
-
33748304343
-
The crystal structure of the Venezuelan equine encephalitis alphavirus nsP2 protease
-
Russo AT, White MA, Watowich SJ. 2006. The crystal structure of the Venezuelan equine encephalitis alphavirus nsP2 protease. Structure 14: 1449-1458.
-
(2006)
Structure
, vol.14
, pp. 1449-1458
-
-
Russo, A.T.1
White, M.A.2
Watowich, S.J.3
-
60
-
-
0037301423
-
Properly folded nonstructural polyprotein directs the Semliki Forest virus replication complex to the endosomal compartment
-
Salonen A, et al. 2003. Properly folded nonstructural polyprotein directs the Semliki Forest virus replication complex to the endosomal compartment. J. Virol. 77:1691-1702.
-
(2003)
J. Virol.
, vol.77
, pp. 1691-1702
-
-
Salonen, A.1
-
61
-
-
0018851365
-
Short-lived minus-strand polymerase for Semliki Forest virus
-
Sawicki DL, Sawicki SG. 1980. Short-lived minus-strand polymerase for Semliki Forest virus. J. Virol. 34:108 -118.
-
(1980)
J. Virol.
, vol.34
, pp. 108-118
-
-
Sawicki, D.L.1
Sawicki, S.G.2
-
62
-
-
33645972603
-
Role for nsP2 proteins in the cessation of alphavirus minus-strand synthesis by host cells
-
Sawicki DL, Perri S, Polo JM, Sawicki SG. 2006. Role for nsP2 proteins in the cessation of alphavirus minus-strand synthesis by host cells. J. Virol. 80:360 -371.
-
(2006)
J. Virol.
, vol.80
, pp. 360-371
-
-
Sawicki, D.L.1
Perri, S.2
Polo, J.M.3
Sawicki, S.G.4
-
64
-
-
0025336486
-
Cleavage between nsP1 and nsP2 initiates the processing pathway of Sindbis virus nonstructural polyprotein P123
-
Shirako Y, Strauss JH. 1990. Cleavage between nsP1 and nsP2 initiates the processing pathway of Sindbis virus nonstructural polyprotein P123. Virology 177:54-64.
-
(1990)
Virology
, vol.177
, pp. 54-64
-
-
Shirako, Y.1
Strauss, J.H.2
-
65
-
-
0027979138
-
Regulation of Sindbis virus RNA replication: uncleaved P123 and nsP4 function in minus-strand RNA synthesis, whereas cleaved products from P123 are required for efficient plus-strand RNA synthesis
-
Shirako Y, Strauss JH. 1994. Regulation of Sindbis virus RNA replication: uncleaved P123 and nsP4 function in minus-strand RNA synthesis, whereas cleaved products from P123 are required for efficient plus-strand RNA synthesis. J. Virol. 68:1874 -1885.
-
(1994)
J. Virol.
, vol.68
, pp. 1874-1885
-
-
Shirako, Y.1
Strauss, J.H.2
-
66
-
-
0027227704
-
Polyprotein processing in African swine fever virus: a novel gene expression strategy for aDNAvirus
-
Simón-Mateo C, Andrés G, Viñuela E. 1993. Polyprotein processing in African swine fever virus: a novel gene expression strategy for aDNAvirus. EMBO J. 12:2977-2987.
-
(1993)
EMBO J
, vol.12
, pp. 2977-2987
-
-
Simón-Mateo, C.1
Andrés, G.2
Viñuela, E.3
-
67
-
-
0030810414
-
Polyprotein processing as a strategy for gene expression in RNA viruses
-
Spall VE, Shanks M, Lomonossoff GP. 1997. Polyprotein processing as a strategy for gene expression in RNA viruses. Seminars Virol. 8:15-23.
-
(1997)
Seminars Virol
, vol.8
, pp. 15-23
-
-
Spall, V.E.1
Shanks, M.2
Lomonossoff, G.P.3
-
68
-
-
77949510372
-
Recent advances in targeting viral proteases for the discovery of novel antivirals
-
Steuber H, Hilgenfeld R. 2010. Recent advances in targeting viral proteases for the discovery of novel antivirals. Curr. Top. Med. Chem. 10: 323-345.
-
(2010)
Curr. Top. Med. Chem.
, vol.10
, pp. 323-345
-
-
Steuber, H.1
Hilgenfeld, R.2
-
69
-
-
0028088152
-
The alphaviruses: gene expression, replication, and evolution
-
Strauss JH, Strauss EG. 1994. The alphaviruses: gene expression, replication, and evolution. Microbiol. Rev. 58:491-562.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 491-562
-
-
Strauss, J.H.1
Strauss, E.G.2
-
70
-
-
0344628701
-
Expression of murine coronavirus recombinant papain-like proteinase: efficient cleavage is dependent on the lengths of both the substrate and the proteinase polypeptides
-
Teng H, Piñón JD, Weiss SR. 1999. Expression of murine coronavirus recombinant papain-like proteinase: efficient cleavage is dependent on the lengths of both the substrate and the proteinase polypeptides. J. Virol. 73:2658 -2666.
-
(1999)
J. Virol.
, vol.73
, pp. 2658-2666
-
-
Teng, H.1
Piñón, J.D.2
Weiss, S.R.3
-
71
-
-
17244364283
-
Proteases universally recognize beta strands in their active sites
-
Tyndall JD, Nall T, Fairlie DP. 2005. Proteases universally recognize beta strands in their active sites. Chem. Rev. 105:973-999.
-
(2005)
Chem. Rev.
, vol.105
, pp. 973-999
-
-
Tyndall, J.D.1
Nall, T.2
Fairlie, D.P.3
-
72
-
-
0035903188
-
Site-specific protease activity of the carboxyl-terminal domain of Semliki Forest virus replicase protein nsP2
-
Vasiljeva L, Valmu L, Kääriäinen L, Merits A. 2001. Site-specific protease activity of the carboxyl-terminal domain of Semliki Forest virus replicase protein nsP2. J. Biol. Chem. 276:30786 -30793.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 30786-30793
-
-
Vasiljeva, L.1
Valmu, L.2
Kääriäinen, L.3
Merits, A.4
-
73
-
-
0142211312
-
Regulation of the sequential processing of Semliki Forest virus replicase polyprotein
-
Vasiljeva L, et al. 2003. Regulation of the sequential processing of Semliki Forest virus replicase polyprotein. J. Biol. Chem. 278:41636-41645.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 41636-41645
-
-
Vasiljeva, L.1
-
74
-
-
69249210978
-
Ligands, their receptors and plasma membranes
-
Vauquelin G, Packeu A. 2009. Ligands, their receptors and plasma membranes. Mol. Cell Endocrinol. 311:1-10.
-
(2009)
Mol. Cell Endocrinol.
, vol.311
, pp. 1-10
-
-
Vauquelin, G.1
Packeu, A.2
-
75
-
-
29044449835
-
The tRNase Z family of proteins: physiological functions, substrate specificity and structural properties
-
Vogel A, Schilling O, Späth B, Marchfelder A. 2005. The tRNase Z family of proteins: physiological functions, substrate specificity and structural properties. Biol. Chem. 386:1253-1264.
-
(2005)
Biol. Chem.
, vol.386
, pp. 1253-1264
-
-
Vogel, A.1
Schilling, O.2
Späth, B.3
Marchfelder, A.4
-
76
-
-
47649098600
-
Cooperativity and biological complexity
-
Whitty A. 2008. Cooperativity and biological complexity. Science 4:435- 439.
-
(2008)
Science
, vol.4
, pp. 435-439
-
-
Whitty, A.1
-
77
-
-
47649126376
-
Cooperativity in macromolecular assembly
-
Williamson JR. 2008. Cooperativity in macromolecular assembly. Nat. Chem. Biol. 4:458-465.
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 458-465
-
-
Williamson, J.R.1
-
78
-
-
0033571623
-
Molecular views of viral polyprotein processing revealed by the crystal structure of the hepatitis C virus bifunctional protease-helicase
-
Yao N, Reichert P, Taremi SS, Prosise WW, Weber PC. 1999. Molecular views of viral polyprotein processing revealed by the crystal structure of the hepatitis C virus bifunctional protease-helicase. Structure 7:1353-1363.
-
(1999)
Structure
, vol.7
, pp. 1353-1363
-
-
Yao, N.1
Reichert, P.2
Taremi, S.S.3
Prosise, W.W.4
Weber, P.C.5
-
79
-
-
57649089398
-
Molecular cloning, overproduction, purification and biochemical characterization of the p39 nsp2 protease domains encoded by three alphaviruses
-
Zhang D, Tözsér J, Waugh DS. 2009. Molecular cloning, overproduction, purification and biochemical characterization of the p39 nsp2 protease domains encoded by three alphaviruses. Protein Expr. Purif. 64: 89-97.
-
(2009)
Protein Expr. Purif.
, vol.64
, pp. 89-97
-
-
Zhang, D.1
Tözsér, J.2
Waugh, D.S.3
-
80
-
-
0034072633
-
Virus-encoded proteinases and proteolytic processing in the Nidovirales
-
Ziebuhr J, Snijder EJ, Gorbalenya AE. 2000. Virus-encoded proteinases and proteolytic processing in the Nidovirales. J. Gen. Virol. 81:853- 879.
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 853-879
-
-
Ziebuhr, J.1
Snijder, E.J.2
Gorbalenya, A.E.3
|