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Volumn 12, Issue 2, 2012, Pages 241-245

Investigating the macropinocytic proteome of Dictyostelium amoebae by high-resolution mass spectrometry

Author keywords

Cell biology; Dictyostelium; Endocytosis; MS

Indexed keywords

PROTEOME; PROTOZOAL PROTEIN;

EID: 84855930090     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201100313     Document Type: Article
Times cited : (36)

References (28)
  • 1
    • 58149197599 scopus 로고    scopus 로고
    • dictyBase-a Dictyostelium bioinformatics resource update
    • Fey, P., Gaudet, P., Curk, T., Zupan, B. et al., dictyBase-a Dictyostelium bioinformatics resource update. Nucleic Acids Res. 2009, 37, D515-D519.
    • (2009) Nucleic Acids Res. , vol.37
    • Fey, P.1    Gaudet, P.2    Curk, T.3    Zupan, B.4
  • 2
    • 18344395923 scopus 로고    scopus 로고
    • The genome of the social amoeba Dictyostelium discoideum
    • Eichinger, L., Pachebat, J. A., Glockner, G., Rajandream, M. A. et al., The genome of the social amoeba Dictyostelium discoideum. Nature 2005, 435, 43-57.
    • (2005) Nature , vol.435 , pp. 43-57
    • Eichinger, L.1    Pachebat, J.A.2    Glockner, G.3    Rajandream, M.A.4
  • 3
    • 77958606998 scopus 로고    scopus 로고
    • Molecular characterization of the evolution of phagosomes
    • Boulais, J., Trost, M., Landry, C. R., Dieckmann, R. et al., Molecular characterization of the evolution of phagosomes. Mol. Syst. Biol. 2010, 6, 423.
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 423
    • Boulais, J.1    Trost, M.2    Landry, C.R.3    Dieckmann, R.4
  • 4
    • 0037743735 scopus 로고    scopus 로고
    • Eukaryotic chemotaxis: distinctions between directional sensing and polarization
    • Devreotes, P., Janetopoulos, C., Eukaryotic chemotaxis: distinctions between directional sensing and polarization. J. Biol. Chem. 2003, 278, 20445-20448.
    • (2003) J. Biol. Chem. , vol.278 , pp. 20445-20448
    • Devreotes, P.1    Janetopoulos, C.2
  • 5
    • 80855144226 scopus 로고    scopus 로고
    • Macropinocytosis: An endocytic pathway for internalising large gulps
    • Lim, J. P., Gleeson, P. A., Macropinocytosis: An endocytic pathway for internalising large gulps. Immunol. Cell Biol. 2011, 89, 836-843.
    • (2011) Immunol. Cell Biol. , vol.89 , pp. 836-843
    • Lim, J.P.1    Gleeson, P.A.2
  • 6
    • 0027308313 scopus 로고
    • Kinetics of endosomal pH evolution in Dictyostelium discoideum amoebae - study by fluorescence spectroscopy
    • Aubry, L., Klein, G., Martiel, J. L., Satre, M., Kinetics of endosomal pH evolution in Dictyostelium discoideum amoebae - study by fluorescence spectroscopy. J. Cell Sci. 1993, 105, 861-866.
    • (1993) J. Cell Sci. , vol.105 , pp. 861-866
    • Aubry, L.1    Klein, G.2    Martiel, J.L.3    Satre, M.4
  • 7
    • 0027418774 scopus 로고
    • Characterization of lysosomes isolated from Dictyostelium discoideum by magnetic fractionation
    • Rodriguez-Paris, J. M., Nolta, K. V., Steck, T. L., Characterization of lysosomes isolated from Dictyostelium discoideum by magnetic fractionation. J. Biol. Chem. 1993, 268, 9110-9116.
    • (1993) J. Biol. Chem. , vol.268 , pp. 9110-9116
    • Rodriguez-Paris, J.M.1    Nolta, K.V.2    Steck, T.L.3
  • 8
    • 0021800788 scopus 로고
    • Characterization of protein transport between successive compartments of the Golgi apparatus: asymmetric properties of donor and acceptor activities in a cell-free system
    • Balch, W. E., Rothman, J. E., Characterization of protein transport between successive compartments of the Golgi apparatus: asymmetric properties of donor and acceptor activities in a cell-free system. Arch. Biochem. Biophys. 1985, 240, 413-425.
    • (1985) Arch. Biochem. Biophys. , vol.240 , pp. 413-425
    • Balch, W.E.1    Rothman, J.E.2
  • 9
    • 33750142806 scopus 로고    scopus 로고
    • Purification techniques of subcellular compartments for analytical and preparative purposes
    • Aubry, L., Klein, G., Purification techniques of subcellular compartments for analytical and preparative purposes. Meth. Mol. Biol. 2006, 346, 171-185.
    • (2006) Meth. Mol. Biol. , vol.346 , pp. 171-185
    • Aubry, L.1    Klein, G.2
  • 10
    • 0029101559 scopus 로고
    • Identification of major proteins associated with Dictyostelium discoideum endocytic vesicles
    • Adessi, C., Chapel, A., Vincon, M., Rabilloud, T. et al., Identification of major proteins associated with Dictyostelium discoideum endocytic vesicles. J. Cell Sci. 1995, 108, 3331-3337.
    • (1995) J. Cell Sci. , vol.108 , pp. 3331-3337
    • Adessi, C.1    Chapel, A.2    Vincon, M.3    Rabilloud, T.4
  • 11
    • 0037099011 scopus 로고    scopus 로고
    • Dynamics of the vacuolar H(+)-ATPase in the contractile vacuole complex and the endosomal pathway of Dictyostelium cells
    • Clarke, M., Kohler, J., Arana, Q., Liu, T. et al., Dynamics of the vacuolar H(+)-ATPase in the contractile vacuole complex and the endosomal pathway of Dictyostelium cells. J. Cell Sci. 2002, 115, 2893-2905.
    • (2002) J. Cell Sci. , vol.115 , pp. 2893-2905
    • Clarke, M.1    Kohler, J.2    Arana, Q.3    Liu, T.4
  • 12
    • 50249129671 scopus 로고    scopus 로고
    • Sorting of the v-SNARE VAMP7 in Dictyostelium discoideum: a role for more than one Adaptor Protein (AP) complex
    • Bennett, N., Letourneur, F., Ragno, M., Louwagie, M., Sorting of the v-SNARE VAMP7 in Dictyostelium discoideum: a role for more than one Adaptor Protein (AP) complex. Exp. Cell Res. 2008, 314, 2822-2833.
    • (2008) Exp. Cell Res. , vol.314 , pp. 2822-2833
    • Bennett, N.1    Letourneur, F.2    Ragno, M.3    Louwagie, M.4
  • 13
    • 0036799355 scopus 로고    scopus 로고
    • High-resolution dissection of phagosome maturation reveals distinct membrane trafficking phases
    • Gotthardt, D., Warnatz, H. J., Henschel, O., Bruckert, F. et al., High-resolution dissection of phagosome maturation reveals distinct membrane trafficking phases. Mol. Biol. Cell 2002, 13, 3508-3520.
    • (2002) Mol. Biol. Cell , vol.13 , pp. 3508-3520
    • Gotthardt, D.1    Warnatz, H.J.2    Henschel, O.3    Bruckert, F.4
  • 14
    • 0026722990 scopus 로고
    • Purification, functional characterization, and cDNA sequencing of mitochondrial porin from Dictyostelium discoideum
    • Troll, H., Malchow, D., Muller-Taubenberger, A., Humbel, B. et al., Purification, functional characterization, and cDNA sequencing of mitochondrial porin from Dictyostelium discoideum. J. Biol. Chem. 1992, 267, 21072-21079.
    • (1992) J. Biol. Chem. , vol.267 , pp. 21072-21079
    • Troll, H.1    Malchow, D.2    Muller-Taubenberger, A.3    Humbel, B.4
  • 15
    • 0030697865 scopus 로고    scopus 로고
    • Dictyostelium discoideum protein disulfide isomerase, an endoplasmic reticulum resident enzyme lacking a KDEL-type retrieval signal
    • Monnat, J., Hacker, U., Geissler, H., Rauchenberger, R. et al., Dictyostelium discoideum protein disulfide isomerase, an endoplasmic reticulum resident enzyme lacking a KDEL-type retrieval signal. FEBS Lett. 1997, 418, 357-362.
    • (1997) FEBS Lett. , vol.418 , pp. 357-362
    • Monnat, J.1    Hacker, U.2    Geissler, H.3    Rauchenberger, R.4
  • 16
    • 34147149761 scopus 로고    scopus 로고
    • A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture
    • Jaquinod, M., Villiers, F., Kieffer-Jaquinod, S., Hugouvieux, V. et al., A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol. Cell. Proteomics 2007, 6, 394-412.
    • (2007) Mol. Cell. Proteomics , vol.6 , pp. 394-412
    • Jaquinod, M.1    Villiers, F.2    Kieffer-Jaquinod, S.3    Hugouvieux, V.4
  • 17
    • 70349091863 scopus 로고    scopus 로고
    • A guide to the Proteomics Identifications Database proteomics data repository
    • Vizcaino, J. A., Côté, R., Reisinger, F., Foster, J. M. et al., A guide to the Proteomics Identifications Database proteomics data repository. Proteomics 2009, 9, 4276-4283.
    • (2009) Proteomics , vol.9 , pp. 4276-4283
    • Vizcaino, J.A.1    Côté, R.2    Reisinger, F.3    Foster, J.M.4
  • 18
    • 34248531753 scopus 로고    scopus 로고
    • Locating proteins in the cell using TargetP, SignalP and related tools
    • Emanuelsson, O., Brunak, S., von Heijne, G., Nielsen, H., Locating proteins in the cell using TargetP, SignalP and related tools. Nat. Protoc. 2007, 2, 953-971.
    • (2007) Nat. Protoc. , vol.2 , pp. 953-971
    • Emanuelsson, O.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 19
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh, A., Larsson, B., von Heijne, G., Sonnhammer, E. L., Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes. J. Mol. Biol. 2001, 305, 567-580.
    • (2001) J. Mol. Biol. , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, E.L.4
  • 20
    • 0033600935 scopus 로고    scopus 로고
    • Prediction of potential GPI-modification sites in proprotein sequences
    • Eisenhaber, B., Bork, P., Eisenhaber, F., Prediction of potential GPI-modification sites in proprotein sequences. J. Mol. Biol. 1999, 292, 741-758.
    • (1999) J. Mol. Biol. , vol.292 , pp. 741-758
    • Eisenhaber, B.1    Bork, P.2    Eisenhaber, F.3
  • 21
    • 33748422691 scopus 로고    scopus 로고
    • Trafficking and developmental signaling: alix at the crossroads
    • Mattei, S., Klein, G., Satre, M., Aubry, L., Trafficking and developmental signaling: alix at the crossroads. Eur. J. Cell Biol. 2006, 85, 925-936.
    • (2006) Eur. J. Cell Biol. , vol.85 , pp. 925-936
    • Mattei, S.1    Klein, G.2    Satre, M.3    Aubry, L.4
  • 22
    • 13544273329 scopus 로고    scopus 로고
    • Dd-Alix, a conserved endosome-associated protein, controls Dictyostelium development
    • Mattei, S., Ryves, W. J., Blot, B., Sadoul, R. et al., Dd-Alix, a conserved endosome-associated protein, controls Dictyostelium development. Dev. Biol. 2005, 279, 99-113.
    • (2005) Dev. Biol. , vol.279 , pp. 99-113
    • Mattei, S.1    Ryves, W.J.2    Blot, B.3    Sadoul, R.4
  • 23
    • 78650767353 scopus 로고    scopus 로고
    • FYVE-dependent endosomal targeting of an arrestin-related protein in amoeba
    • Guetta, D., Langou, K., Grunwald, D., Klein, G., Aubry, L., FYVE-dependent endosomal targeting of an arrestin-related protein in amoeba. PLoS One 2010, 5, e15249.
    • (2010) PLoS One , vol.5
    • Guetta, D.1    Langou, K.2    Grunwald, D.3    Klein, G.4    Aubry, L.5
  • 24
    • 65949089009 scopus 로고    scopus 로고
    • The arrestin fold: variations on a theme
    • Aubry, L., Guetta, D., Klein, G., The arrestin fold: variations on a theme. Curr. Genomics 2009, 10, 133-142.
    • (2009) Curr. Genomics , vol.10 , pp. 133-142
    • Aubry, L.1    Guetta, D.2    Klein, G.3
  • 25
    • 78650854802 scopus 로고    scopus 로고
    • Beta-arrestins as regulators of signal termination and transduction: How do they determine what to scaffold?
    • DeFea, K. A., Beta-arrestins as regulators of signal termination and transduction: How do they determine what to scaffold? Cell. Signal. 2011, 23, 621-629.
    • (2011) Cell. Signal. , vol.23 , pp. 621-629
    • DeFea, K.A.1
  • 26
    • 77954957013 scopus 로고    scopus 로고
    • Membrane budding and scission by the ESCRT machinery: it's all in the neck
    • Hurley, J. H., Hanson, P. I., Membrane budding and scission by the ESCRT machinery: it's all in the neck. Nat. Rev. Mol. Cell Biol. 2010, 11, 556-566.
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , pp. 556-566
    • Hurley, J.H.1    Hanson, P.I.2
  • 27
    • 58549084391 scopus 로고    scopus 로고
    • Dictyostelium Tom1 participates to an ancestral ESCRT-0 complex
    • Blanc, C., Charette, S. J., Mattei, S., Aubry, L. et al., Dictyostelium Tom1 participates to an ancestral ESCRT-0 complex. Traffic 2009, 10, 161-171.
    • (2009) Traffic , vol.10 , pp. 161-171
    • Blanc, C.1    Charette, S.J.2    Mattei, S.3    Aubry, L.4
  • 28
    • 33846004766 scopus 로고    scopus 로고
    • Proteomics fingerprinting of phagosome maturation and evidence for the role of a Galpha during uptake
    • Gotthardt, D., Blancheteau, V., Bosserhoff, A., Ruppert, T. et al., Proteomics fingerprinting of phagosome maturation and evidence for the role of a Galpha during uptake. Mol. Cell. Proteomics 2006, 5, 2228-2243.
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 2228-2243
    • Gotthardt, D.1    Blancheteau, V.2    Bosserhoff, A.3    Ruppert, T.4


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