Predictive distribution modeling of the sandy-beach supralittoral amphipod Atlantorchestoidea brasiliensis along a macroscale estuarine gradient

Estuarine, Coastal and Shelf Science

Volumn 98, Issue , 2012, Pages 84-93

  Gómez, Julio ^a   Defeo, Omar ^a  

^a Unidad en Desarrollo de Ciencias del Mar   (Uruguay)

Author keywords

Estuary; Macroscale distribution; Predictive modeling; Rio de la Plata; Sandy beach; Supralittoral; Talitridae

Indexed keywords

ABUNDANCE; AMPHIPOD; BEACH; ESTUARINE ECOSYSTEM; LITTORAL ENVIRONMENT; POPULATION MODELING; PREDICTION; SALINITY; SPECIES OCCURRENCE; WATER TEMPERATURE;

RIO DE LA PLATA;

TALITRIDAE;

EID: 84855888231     PISSN: 02727714     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecss.2011.12.008     Document Type: Article

References (78)

1. Atrill M.J. Atestable linear model for diversity trends in estuaries. Journal of Animal Ecology 2002, 71:262-269.
2. Austin M.P. Spatial prediction of species distribution: an interface between ecological theory and statistical modelling. Ecological Modelling 2002, 157:101-118.
3. Austin M.P. Species distribution models and ecological theory: a critical assessment and some possible new approaches. Ecological Modelling 2007, 200:1-19.
4. Barry S.C., Welsh A.H. Generalized additive modelling and zero inflated count data. Ecological Modelling 2002, 157:179-188.
5. Bergamino L., Lercari D., Defeo O. Food web structure of sandy beaches: temporal and spatial variation using stable isotope analysis. Estuarine, Coastal and Shelf Science 2011, 91:536-543.
6. Blaber S.J.M., Cyrus D.P., Albaret J.-J., Ching C.V., Day J.W., Elliott M., Fonseca M.S., Hoss D.E., Orensanz J., Potter I.C., Silvert W. Effects of fishing on the structure and functioning of estuarine and nearshore ecosystems. ICES Journal of Marine Science 2000, 57:590-602.
7. Brazeiro A., Defeo O. Macroinfauna zonation in microtidal sandy beaches: is it possible to identify patterns in such variable environments. Estuarine, Coastal and Shelf Science 1996, 42:523-536.
8. Cardoso R.S., Veloso V.G. Population biology and secondary production of the sandhopper Pseudorchestoidea brasiliensis (Amphipoda: Talitridae) at Prainha Beach, Brazil. Marine Ecology Progress Series 1996, 142:111-119.
9. Cardoso R.S. Behavioural strategies and surface activity of the sandhopper Pseudorchestoidea brasiliensis (Amphipoda: Talitridae) on a Brazilian beach. Marine Biology 2002, 141:167-173.
10. Celentano E., Gutiérrez N., Defeo O. Effects of morphodynamic and estuarine gradients on a sandy beach mole crab demography and distribution: implications for source-sink habitat dynamics. Marine Ecology Progress Series 2010, 398:193-205.
11. Colombini I., Chelazzi L. Environmental factors influencing the surface activity of Eurynebia complanata (Coleoptera, Carabidae). Revista Chilena de Historia Natural 1996, 69:511-537.
12. Constable A.J. Ecology of benthic macro-invertebrates in soft-sediment environments: a review of progress towards quantitative models and predictions. Australian Journal of Ecology 1999, 24:452-476.
13. Dana J.D. Tribe III. Cyproidea=Ostracoda. In Crustacea. United States Exploring Expedition During the Years 1838, 1839, 1840, 1841, 1842, Under the Command of Charles Wilkes, USM, With Atlas of 96 Plates, 13(2): 1277-1304, Plates 90-91 1853, C. Sherman, Philadelphia.
14. Davenport J. The isolation response of mussels (Mytilus edulis L.) exposed to falling sea water concentrations. Journal of the Marine Biological Association of the United Kingdom 1979, 59:123-132.
15. Day J.W., Hall C.A., Kemp W.M., Yáñez-Arancibia A. Estuarine Ecology 1989, Wiley and Sons, New York, 558 pp.
16. Defeo O., de Alava A. Effects of human activities on long-term trends in sandy beach populations: the wedge clam Donax hanleyanus in Uruguay. Marine Ecology Progress Series 1995, 123:73-82.
17. Defeo O., Martínez G. The habitat harshness hypothesis revisited: life history of the isopod Excirolana braziliensis in sandy beaches with contrasting morphodynamics. Journal of the Marine Biological Association of the United Kingdom 2003, 83:331-340.
18. Defeo O., McLachlan A. Patterns, processes and regulatory mechanisms in sandy beach macrofauna: a multiscale analysis. Marine Ecology Progress Series 2005, 295:1-20.
19. Defeo O., Gómez J. Morphodynamics and habitat safety in sandy beaches: life history adaptations in a supralittoral amphipod. Marine Ecology Progress Series 2005, 293:143-153.
20. Defeo O., McLachlan A., Schoeman D.S., Schlacher T.A., Dugan J., Jones A., Lastra M., Scapini F. Threats to sandy beach ecosystems: a review. Estuarine, Coastal and Shelf Science 2009, 81:1-12.
21. Defeo O., McLachlan A. Coupling between macrofauna community structure and beach type: a deconstructive meta-analysis. Marine Ecology Progress Series 2011, 433:29-41.
22. Dugan J.E., Defeo O., Jaramillo E., Jones A.R., Lastra M., Nel R., Peterson C.H., Scapini F., Schlacher T., Schoeman D.S. Give beach ecosystems their day in the sun. Science 2010, 329:1146.
23. Edgar G.J., Shaw C. The production and trophic ecology of shallow-water fish assemblages in southern Australia. II. Diets of fishes and trophic relationships between fishes and benthos at Western Port, Victoria. Journal of Experimental Marine Biology and Ecology 1995, 194:83-106.
24. Emery K.O. Asimple method of measuring beach profiles. Limnology and Oceanography 1961, 6:90-93.
25. Elliott M., Quintino V. The Estuarine Quality Paradox, environmental homeostasis and the difficulty of detecting anthropogenic stress in naturally stressed areas. Marine Pollution Bulletin 2007, 54:640-645.
26. Elliott M., Whitfield A.K. Challenging paradigms in estuarine ecology and management. Estuarine, Coastal and Shelf Science 2011, 94:306-314.
27. Fanini L., Defeo O., Do Santos C., Scapini F. Testing the Habitat Safety Hypothesis with behavioural field experiments: amphipod orientation on sandy beaches with contrasting morphodynamics. Marine Ecology Progress Series 2009, 392:133-141.
28. Franklin J. Predictive vegetation mapping: geographic modelling of biospatial patterns in relation to environmental gradients. Progress in Physical Geography 1995, 19:474-499.
29. Frechette M., Bourget E. Energy flow between the pelagic and benthic zones: factors controlling particulate organic matter available to an intertidal mussel bed. Canadian Journal of Fisheries and Aquatic Sciences 1985, 42:1158-1165.
30. Gómez J., Defeo O. Life history of the sandhopper Pseudorchestoidea brasiliensis (Amphipoda) in sandy beaches with contrasting morphodynamics. Marine Ecology Progress Series 1999, 182:209-220.
31. Gotway J.C., Ferguson R.B., Hergert G.W., Peterson T.A. Comparison of kriging and inverse-distance methods for mapping soil parameters. Soil Science Society of America 1996, 60:1237-1247.
32. Greene M.P., Hamilton M.G., Botton M.L. Physiological responses of horseshoe crab (Limulus polyphemus) embryos to osmotic stress and a possible role for stress proteins (HSPs). Marine Biology 2011, 158:1691-1698.
33. Griffiths C.L., Stenton-Dozey J.M.E., Koop K. Kelp wrack and the flow of energy through a sandy beach ecosystem. Sandy Beach as Ecosystems 1983, 547-556. W. Junk, The Hague. A. McLachlan, T. Erasmus (Eds.).
34. Guisan A., Zimmermann N.E. Predictive habitat distribution models in ecology. Ecological Modelling 2000, 135:147-186.
35. Hanley J.A., McNeil B.J. The meaning and use of the area under a receiver operating characteristic (ROC) curve. Radiology 1982, 143:29-36.
36. Hastie T. gam: Generalized Additive Models. R package version 1.04.1 http://CRAN.R-project.org/package=gam.
37. Hastie T., Tibshirani R. Generalized Additive Models 1990, Champan & Hall, London, 335 pp.
38. Hastie T., Tibshirani R., Friedman J. The Elements of Statistical Learning 2001, Springer-Verlag, New York, 746 pp.
39. Herrmann M., Alfaya J.E.F., Lepore M.L., Penchaszadeh P.E., Arntz W.E. Population structure, growth and production of the yellow clam Mesodesma mactroides (Bivalvia: Mesodesmatidae) from a high-energy, temperate beach in northern Argentina. Helgoland Marine Research 2011, 65:285-297.
40. Herrick J.E., Jones T.L. Adynamic cone penetrometer for measuring soil penetration resistance. Soil Science Society of America 2002, 66:1320-1324.
41. Heymans J.J., McLachlan A. Carbon budget and network analysis of a wide-energy beach/surf-zone ecosystem. Estuarine, Coastal and Shelf Science 1996, 43:485-505.
42. Hosmer D.W., Lemeshow S. Applied Logistic Regression 1989, John Wiley & Sons, New York, 307 pp.
43. Hughes M.G., Turner I. The beachface. Handbook of Beach and Shoreface Morphodynamics 1999, 119-144. John Wiley & Sons, New York. A.D. Short (Ed.).
44. Irlandi E., Maciá S., Serafy J.E. Salinity reduction from freshwater canal discharge: effects on mortality and feeding of an urchin (Lytechinus variegatus) and a gastropod (Lithopoma tectum). Bulletin of Marine Science 1997, 61:869-879.
45. Jensen P.O., Seppelt R., Miller T.J., Bauer L.J. Winter distribution of blue crab Callinectes sapidus in Chesapeake Bay: application and cross-validation of a two-stage generalized additive model. Marine Ecology Progress Series 2005, 299:239-255.
46. Kennedy F., Naylor E., Jaramillo E. Ontogenetic differences in the circadian activity rhythm of the talitrid amphipod crustacean Orchestoidea tuberculata. Marine Biology 2000, 137:511-517.
47. Khlebovich V.V. Some peculiar features of the hydrochemical regime and the fauna of mesohaline waters. Marine Biology 1968, 2:47-49.
48. Kinne O. Salinity. Marine Ecology 1971, 683-995. Wiley-Interscience, New York. O. Kinne (Ed.).
49. Lalitha M., Shyamsundari K., Rao K.H. Effect of salinity and temperature on the littoral sandhopper Talorchestia martensii (Weber) (Crustacea: Amphipoda). Revista di Idrobiologia 1988, 27:121-130.
50. Leathwick J.R., Austin M. Competitive interactions between tree species in New Zealand old-growth indigenous forests. Ecology 2001, 82:2560-2573.
51. Lercari D., Defeo O. Large-scale diversity and abundance trends in sandy beach macrofauna along full gradients of salinity and morphodynamics. Estuarine, Coastal and Shelf Science 2006, 68:27-35.
52. Lercari D., Bergamino L., Defeo O. Trophic models in sandy beaches with contrasting morphodynamics: comparing ecosystem structure and biomass flow. Ecological Modelling 2010, 221:2751-2759.
53. Lozoya J.P., Gomez J., Defeo O. Modelling large-scale effects of estuarine and morphodynamic gradients on distribution and abundance of the sandy beach isopod Excirolana armata. Estuarine, Coastal and Shelf Science 2010, 87:472-478.
54. McCullagh P., Nelder J.A. Generalized Linear Models 1989, Chapman and Hall, London, 511 pp.
55. McLachlan A., Brown A.C. The Ecology of Sandy Shores 2006, Elsevier, Amsterdam, 373 pp. second ed.
56. Menge B.A., Farrel T.M. Community structure and interactions webs in shallow marine hard-bottom communities: tests of an environmental stress model. Advances in Ecological Research 1989, 19:189-192.
57. Mianzan H., Lasta C.A., Acha E.M., Guerrero R.A., Macchi G., Bremec C. The Rio de la Plata estuary, Argentina-Uruguay. Ecological Studies: Coastal Marine Ecosystems of Latin America 2001, 185-204. Springer, Berlin. U. Seeliger, L.D. de Lacerda, B. Kjerve (Eds.).
58. Navarro J.M. The effects of salinity on the physiological ecology of Choromytilus chorus (Molina, 1782) (Bivalvia: Mytilidae). Journal of Experimental Marine Biology and Ecology 1988, 122:19-33.
59. R Development Core Team R: A Language and Environment for Statistical Computing 2011, R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/.
60. Remane A., Schlieper C. Biology of Brackish Water 1971, E. Schweiserbart'sche Verlagsbuchhandlung, Stuttgart, 372 pp.
61. Ricciardi A., Bourget E. Global patterns of macroinvertebrate biomass in marine intertidal communities. Marine Ecology Progress Series 1999, 185:21-35.
62. Scapini F., Buiatti M., De Matthaeis E., Mattoccia M. Orientation behaviour and heterozygosity of sandhopper populations in relation to stability of beach environments. Journal of Evolutionary Biology 1995, 8:43-52.
63. Schlacher T.A., Schoeman D.S., Dugan J., Lastra M., Jones A., Scapini F., McLachlan A. Sandy beach ecosystems: key features, management challenges, climate change impacts, and sampling issues. Marine Ecology 2008, 29:70-90.
64. Schoeman D.S., Richardson A.J. Investigating biotic and abiotic factors affecting the recruitment of an intertidal clam on an exposed sandy beach using a generalized additive model. Journal of Experimental Marine Biology and Ecology 2002, 276:67-81.
65. Schloeder C.A., Zimmermann N.E., Jacobs M.J. Comparison of methods for interpolating soil properties using limited data. Soil Science Society of America 2001, 65:470-479.
66. Serejo C.S. Talitridae (Amphipoda, Gammaridea) from the Brazilian coastline. Zootaxa 2004, 646:1-29.
67. Short A.D. The role of wave height, period, slope, tide range and embaymentisation in beach classifications: a review. Revista Chilena de Historia Natural 1996, 69:589-604.
68. Short A.D. Wave-dominated beaches. Handbook of Beach and Shoreface Morphodynamics 1999, 119-144. John Wiley & Sons, New York. A.D. Short (Ed.).
69. Steele D.H., Steele V.J. Effects of salinity on the survival, growth rate, and reproductive output of Gammarus lawrencianus (Crustacea, Amphipoda). Marine Ecology Progress Series 1991, 78:49-56.
70. Talbot M.M.B., Bate G.C. Beach morphodynamics and surf-zone diatom populations. Journal of Experimental Marine Biology and Ecology 1989, 129:231-241.
71. Telesh I.V., Schubert H., Skarlato S.O. Revisiting Remane's concept: evidence for high plankton diversity and a protistan species maximum in the horohalinicum of the Baltic Sea. Marine Ecology Progress Series 2011, 421:1-11.
72. UNESCO Conservación y mejora de playas 1980, Montevideo, Uruguay, 593 pp, Technical report.
73. Welsh A.H., Cunningham R., Donnelly C., Lindenmeyer D. Modelling the abundance of rare species: statistical models for counts with extra zeros. Ecological Modelling 1996, 88:297-308.
74. Venables W.N., Ripley B.D. Modern Applied Statistics with S-PLUS 1999, Springer-Verlag, London, 512 pp. third ed.
75. Venice System The final resolution of the symposium on the classification of brackish waters. Archivio di Oceanografia e Limnologia 1959, 11(Suppl.):243-248.
76. Vetaas O.R. Realized and potential climate niches: a comparison of four Rhododendron tree species. Journal of Biogeography 2002, 29:545-554.
77. Waser L.T., Stofer S., Schwarz M., Küchler M., Ivits E., Scheidegger C. Prediction of biodiversity - regression of lichen species richness on remote sensing data. Community Ecology 2004, 5:121-134.
78. Ysebaert T., Meire P., Herman M.J., Verbeek H. Macrobenthic species response surfaces along estuarine gradients: prediction by logistic regression. Marine Ecology Progress Series 2002, 225:79-95.