Maricurvus nonylphenolicus gen. nov., sp. nov., a nonylphenol-degrading bacterium isolated from seawater

FEMS Microbiology Letters

Volumn 327, Issue 2, 2012, Pages 142-147

  Iwaki, Hiroaki ^a   Takada, Kengo ^a   Hasegawa, Yoshie ^a  

^a KANSAI UNIVERSITY   (Japan)

Author keywords

Alkylphenol; Maricurvus nonylphenolicus; Marine bacterium; Nonylphenol

Indexed keywords

RNA 16S; SEA WATER; UBIQUINONE; UBIQUINONE 8; UNCLASSIFIED DRUG;

ALTEROMONADALES; ARTICLE; BACTERIAL STRAIN; BACTERIUM; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CONTROLLED STUDY; GAMMAPROTEOBACTERIA; GRAM NEGATIVE BACTERIUM; MARICURVUS NONYLPHENOLICUS; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; PSEUDOTERDINIBACTERISOPRAE; RNA SEQUENCE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; TERDINIBACTER TURNERAE; WATER ANALYSIS;

BASE COMPOSITION; BIODEGRADATION, ENVIRONMENTAL; GAMMAPROTEOBACTERIA; MOLECULAR SEQUENCE DATA; PHENOLS; PHYLOGENY; SEAWATER; WATER POLLUTANTS, CHEMICAL;

ALTEROMONADALES; BACTERIA (MICROORGANISMS); GAMMAPROTEOBACTERIA; NEGIBACTERIA; TEREDINIBACTER TURNERAE;

EID: 84855806683     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2011.02471.x     Document Type: Article

References (23)

1. Barrow GI & Feltham RKA (1993) Cowan and Steel's Manual for the Identification of Medical Bacteria, 3rd edn. Cambridge University Press, Cambridge.
2. Bowman JP & McMeekin TA (2005) Order X. Alteromonadales ord. nov. Bergey's Manual of Systematic Bacteriology, 2nd edn, Vol. 2 (The Proteobacteria), Part B (The Gammaproteobacteria) (Brenner DJ, Krieg NR, Staley JT & Garrity GM, eds), pp. 443. Springer, New York.
3. Chen MH, Sheu SY, Arun AB, Young CC, Chen CA, Wang JT & Chen WM (2011) Pseudoteredinibacter isoporae gen. nov., sp. nov., a marine bacterium, isolated from the reef-building coral Isopora palifera. Int J Syst Evol Microbiol 61: 1887-1893.
4. Corvini PF, Schaffer A & Schlosser D (2006) Microbial degradation of nonylphenol and other alkylphenols-our evolving view. Appl Microbiol Biotechnol 72: 223-243.
5. Cowan ST & Steel KJ (1965) Manual for the Identification of Medical Bacteria. Cambridge University Press, London.
6. David A, Fenet H & Gomez E (2009) Alkylphenols in marine environments: distribution monitoring strategies and detection considerations. Mar Pollut Bull 58: 953-960.
7. Distel DL, Morrill W, MacLaren-Toussaint N, Franks D & Waterbury J (2002) Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae). Int J Syst Evol Microbiol 52: 2261-2269.
8. Ekborg NA, Gonzalez JM, Howard MB, Taylor LE, Hutcheson SW & Weiner RM (2005) Saccharophagus degradans gen. nov., sp. nov., a versatile marine degrader of complex polysaccharides. Int J Syst Evol Microbiol 55: 1545-1549.
9. Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17: 368-376.
10. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
11. Fitch WM (1971) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20: 406-416.
12. Fujii K, Urano N, Ushio H, Satomi M & Kimura S (2001) Sphingomonas cloacae sp. nov., a nonylphenol-degrading bacterium isolated from wastewater of a sewage-treatment plant in Tokyo. Int J Syst Evol Microbiol 51: 603-610.
13. Gonzàlez JM & Weiner RM (2000) Phylogenetic characterization of marine bacterium strain 2-40, a degrader of complex polysaccharides. Int J Syst Evol Microbiol 50: 831-834.
14. Katayama-Fujimura Y, Komatsu Y, Kuraishi H & Kaneko T (1984) Estimation of DNA base composition by high performance liquid chromatography of its nuclease P1 hydrolysate. Agric Biol Chem 48: 3169-3172.
15. Kimura M (1980) A simple method of estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
16. Nakagawa K & Kawasaki H (2001) Determination method of 16S rRNA gene sequence. The Isolation and Characterization of Actinomycetes (The Society for Actinomycetes, ed), pp. 88-117. Business Center for Academic Societies, Japan.
17. Nishijima M, Araki-Sakai M & Sano H (1997) Identification of isoprenoid quinones by frit-FAB liquid chromatography-mass spectrometry for the chemotaxonomy of microorganisms. J Microbiol Methods 28: 113-122.
18. Porter AW & Hay AG (2007) Identification of opdA, a gene involved in biodegradation of the endocrine disrupter octylphenol. Appl Environ Microbiol 73: 7373-7379.
19. Saitou N & Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
20. Takeo M, Prabu SK, Kitamura C, Hirai M, Takahashi H, Kato D & Negoro S (2006) Characterization of alkylphenol degradation gene cluster in Pseudomonas putida MT4 and evidence of oxidation of alkylphenols and alkylcatechols with medium-length alkyl chain. J Biosci Bioeng 102: 352-361.
21. Tamura K, Peterson D, Peterson N, Stecher G, Nei M & Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
22. Urios L, Intertaglia L, Lesongeur F & Lebaron P (2011) Eionea nigra gen. nov., sp. nov., a gammaproteobacterium from the Mediterranean Sea. Int J Syst Evol Microbiol 61: 1677-1681.
23. Ushiba Y, Takahara Y & Ohta H (2003) Sphingobium amiense sp. nov., a novel nonylphenol-degrading bacterium isolated from a river sediment. Int J Syst Evol Microbiol 53: 2045-2048.