Genetic population structure of the invasive signal crayfish Pacifastacus leniusculus in Japan inferred from newly developed microsatellite markers

Plankton and Benthos Research

Volumn 6, Issue 4, 2011, Pages 187-194

  Azuma, Noriko ^a   Usio, Nisikawa ^b   Korenaga, Tomoko ^c   Koizumi, Itsuro ^d   Takamura, Noriko ^c  

^a TOKYO UNIVERSITY OF AGRICULTURE   (Japan)

^b NIIGATA UNIVERSITY   (Japan)

^c NATIONAL INSTITUTE FOR ENVIRONMENTAL STUDIES   (Japan)

^d HOKKAIDO UNIVERSITY   (Japan)

Author keywords

Alien species; Genetic diversity; Genetic structure; Molecular marker; Unintentional introduction

Indexed keywords

ALLELE; BAYESIAN ANALYSIS; BIOLOGICAL INVASION; CLUSTER ANALYSIS; CRAYFISH; FREQUENCY ANALYSIS; FRESHWATER ENVIRONMENT; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC STRUCTURE; GENOME; HETEROZYGOSITY; INVASIVE SPECIES; POLYMORPHISM; POPULATION GENETICS; POPULATION STRUCTURE; SYMBIONT;

EUROPE; JAPAN; NORTH AMERICA;

ASTACOIDEA; PACIFASTACUS LENIUSCULUS;

EID: 84855800785     PISSN: 18808247     EISSN: None     Source Type: Journal    
DOI: 10.3800/pbr.6.187     Document Type: Article

References (42)

1. Abdelkrim J, Pascal M, Calmet C, Samadi S (2005) Importance of assessing population genetic structure before eradication of invasive species: examples from insular Norway rat populations. Conserv Biol 19: 1509-1518.
2. Andreakis N, Kooistra WHCF, Procaccini G (2009) High genetic diversity and connectivity in the polyploid invasive seaweed Asparagopsis taxiformis (Bonnemaisoniales) in the Mediterranean, explored with microsatellite alleles and multilocus genotypes. Mol Ecol 18: 212-226.
3. Azzurro E, Golani D, Bucciarelli G, Bernardi G (2006) Genetics of the early stages of invasion of Lessepsian rabbitfish Siganus luridus. J Exp Mar Biol Ecol 333: 190-201.
4. Chen YH, Berlocher SH, Opp SB, Roderick GK (2010) Post-colonization temporal variation in population genetic structure of an invasive fly, Rhagoletis completa. Genetica 138: 1059-1075.
5. Colautti RI, Manca M, Viljanen M, Ketelaars HAM, Burgi B, MacIsaac HJ, Heath DH (2005) Invasion genetics of the Eurasian spiny waterflea: evidence for bottlenecks and gene flow using microsatellites. Mol Ecol 14: 1869-1879.
6. Dieguez-Uribeondo J (2006) The dispersion of the Aphanomyces astaci-carrier Pacifastacus leniusculus by humans represents the main cause of disappearance of the indigenous crayfish Austropotamobius pallipes in Navarra. Bul Fr Peche Piscic: 1303-1312.
7. Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164: 1567-1587.
8. Guillemaud T, Beaumont MA, Ciosi M, Cornuet JM, Estoup A (2010) Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data. Heredity 104: 88-99.
9. Goudet J (1995) FSTAT (vers. 1.2): a computer program to calculate F-statistics. J Hered: 485-486.
10. Hamilton MB, Pincus EL, Di Fiore A, Fleischer RC (1999) Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. BioTechniques 27: 500-507.
11. Handley LJL, Manica A, Goudet J, Balloux F (2007) Going the distance: Human population genetics in a clinal world. Trends Genet 23: 432-439.
12. Hiruta S (1998) The present status of crayfish in eastern Hokkaido and Britain. J Environ Educ 1: 181-195. (in Japanese)
13. Holdich DM (1999) The negative effects of established crayfish introductions. In: Crayfish in Europe as Alien Species (eds Gherardi F, Holdich DM). Crust Issues 11, A. A. Balkema, Rotterdam, pp. 31-47.
14. Jamieson IG (2010) Founder effects, inbreeding, and loss of genetic diversity in four avian reintroduction programs. Conserv Biol 25: 115-123.
15. Kawai T, Nakata K, Hamano T (2002) Temporal changes of the density in two crayfish species, the native Cambaroides japonicas (De Haan) and the alien Pacifastacus leniusculus (Dana), in natural habitats of Hokkaido, Japan. Freshw Crayfish 13: 198-206.
16. Kawai T, Nakata K (2009) Japanese common name of the Japanese freshwater crayfish Cambaroides japonicus, and present status of the signal crayfish Pacifastacus leniusculus in Nagano Prefecture, Japan. Cancer 18: 49-53.
17. Kolbe JJ, Glor RE, Rodriguez Schettino L et al. (2004) Genetic variation increases during biological invasion by a Cuban lizard. Nature 431: 177-181.
18. Lindholm AK, Breden F, Alexander HJ et al. (2005) Invasion success and genetic diversity of introduced populations of guppies Poecilia reticulata in Australia. Mol Ecol 14: 3671-3682.
19. Miura O, Torchin M, Kuris AM, Hechinger RF, Chiba S (2006) Introduced cryptic species of parasites exhibit different invasion pathways. Proc Natl Acad Sci USA 103: 19818-19823.
20. Nakata K, Goshima S (2003) Competition for shelter of preferred sizes between the native crayfish species Cambaroides japonicas and the alien crayfish species Pacifastacus leniusculus in Japan in relation to prior residence, sex difference, and body size. J Crust Biol 23: 897-907.
21. Nakata K, Goshima S (2006) Asymmetry in mutual predation between the endangered Japanese native crayfish Cambaroides japonicus and the North American invasive crayfish Pacifastacus leniusculus: a possible reason for species replacement. J Crust Biol 26: 134-140.
22. Nakata K, Hayashi N, Osaki M, Ohtaka A, Miwa J (2010) First record of the North American invasive crayfish Pacifastacus leniusculus from the Kanto region, Tone River basin, central Japan: a range expansion to a warm water area. Plankton Benthos Res 5: 165-168.
23. Nyström P (1999) Ecological impact of introduced and native crayfish on freshwater communities: European perspectives. In: Crayfish in Europe as Alien Species (eds Gherardi F, Holdich DM). Crust Issues 11, A. A. Balkema, Rotterdam, pp. 63-85.
24. Okoshi K (2007) Unintentionally introduced species; the clameating moon snail Euspira fortunei. Nippon Suisan Gakkaishi 73: 1129-1132. (in Japanese)
25. Pairon M, Petitpierre B, Broennimann O, Guisan A, Campbell M, Baret P, Jacquemart AL, Besnard G (2010) Multiple introductions boosted genetic diversity in the invasive range of Black Cherry (Prunus serotina, Rosaceae). Ann Bot-London 105: 891-903.
26. Prichard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
27. Raymond M, Rousset F (1995) GENEPOP: population genetics software for exact tests and ecumenism, Ver. 1.2. J Hered 86: 248-249.
28. Reiland J, Hodge S, Noor MAF (2002) Strong founder effect in Drosophila pseudoobscura colonizing New Zealand from North America. J Hered 93: 415-420.
29. Robertson BC, Gemmell NJ (2004) Defining eradication units to control invasive pests. J Appl Ecol 41: 1042-1048.
30. Rollins LA, Woolnough AP, Wilton AN, Sinclair R, Sherwin WB (2009) Invasive species can't cover their tracks: using microsatellites to assist management of starling (Sturnus vulgaris) populations in Western Australia. Mol Ecol 18: 1560-1573.
31. Roman J, Darling JA (2007) Paradox lost: genetic diversity and the success of aquatic invasions. Trends Ecol Evol 22: 454-464
32. Rouset F (2008) Genepop'007: a complete reimplementation of the Genepop software for Windows and Linux. Mol Ecol Res 8: 103-106.
33. Schmid-Hempel P, Schmid-Hempel R, Brunner PC, Seeman OD, Allen GR (2007) Invasion success of the bumblebee, Bombus terrestris, despite a drastic genetic bottleneck. Heredity 99: 414-422.
34. Schneider S, Roessli D, Excoffier L (2000) Arleqin ver. 2.000: a software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland.
35. Selkoe KA, Toonen RJ (2006) Microsatellites for Ecologists: A practical guide to using and evaluating microsatellite markers. Ecol Let 9: 615-629.
36. Slatkin M (1995) A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
37. Takamura K (2009) Invasive species from the highly endemic fish fauna of Lake Biwa threatening freshwater fish in rivers of the Kanto region. Jpn J Limnol 70: 249-254. (in Japanese with English abstract)
38. Usio N, Konishi M, Nakano S (2001) Species displacement between an introduced and a "vulnerable" crayfish: the role of aggressive interactions and shelter competition. Biol Invasions 3: 179-185.
39. Usio N, Nakajima H, Kamiyama R, Hiruta S, Takamura N (2006) Predicting the distribution of invasive crayfish (Pacifastacus leniusculus) in a Kushiro Moor marsh using classification and regression trees. Ecol Res 21: 271-277.
40. Usio N, Nakata K, Kawai T, Kitano S (2007) Distribution and control status of the invasive signal crayfish (Pacifastacus leniusculus) in Japan. Jpn J Limnol 68: 471-482. (in Japanese with English abstract)
41. Usio N, Kamiyama R, Saji A, Takamura N (2009) Size-dependent impacts of invasive alien crayfish on a littoral marsh community. Biol Conserv 142: 1480-1490.
42. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.