Determination of ABO genotypes by real-time PCR using allele-specific primers

Legal Medicine

Volumn 14, Issue 1, 2012, Pages 47-50

  Muro, Tomonori ^a,b   Fujihara, Junko ^a   Imamura, Shinji ^a,b   Nakamura, Hiroaki ^b   Kimura Kataoka, Kaori ^a   Toga, Tomoko ^a   Iida, Reiko ^c   Yasuda, Toshihiro ^c   Takeshita, Haruo ^a  

^a SHIMANE UNIVERSITY   (Japan)

^b Criminal Investigation Laboratory   (Japan)

^c UNIVERSITY OF FUKUI   (Japan)

Author keywords

ABO genotyping; Allele specific primer; Real time PCR; Single nucleotide polymorphism (SNP)

Indexed keywords

ALLELE; ARTICLE; BLOOD GROUP ABO SYSTEM; CRIME; DNA FINGERPRINTING; GENOTYPE; HUMAN; REAL TIME POLYMERASE CHAIN REACTION; SEROLOGY; SINGLE NUCLEOTIDE POLYMORPHISM; VICTIM;

ABO BLOOD-GROUP SYSTEM; ALLELES; DNA PRIMERS; FORENSIC GENETICS; GENOTYPE; HUMANS; POLYMORPHISM, SINGLE NUCLEOTIDE; REAL-TIME POLYMERASE CHAIN REACTION;

EID: 84855756124     PISSN: 13446223     EISSN: 18734162     Source Type: Journal    
DOI: 10.1016/j.legalmed.2011.10.002     Document Type: Article

References (26)

1. Lee J.C., Chang J.G. ABO genotyping by polymerase chain reaction. J Foresic Sci 1992, 37:1269-1275.
2. Lee J.C., Tsai L.C., Chen C.H., Chang J.G. ABO genotyping by mutagenically separated polymerase chain reaction. Forensic Sci Int 1996, 82:227-232.
3. Gassner C., Schmarda A., Nussbaumer W., Schonitzer D. ABO glycosyltransferase genotyping by polymerase chain reaction using sequence-specific primers. Blood 1996, 88:1852-1856.
4. Downing J., Darke C. A modified PCR-SSP method for the identification of ABO blood group antigens. Eur J Immunogenet 2003, 30:295-298.
5. Pearson S.L., Hessner M.J. A(1, 2)BO(1, 2) genotyping by multiplexed allele-specific PCR. Br J Haematol 1998, 100:229-234.
6. Olsson M.L., Irshaid N.M., Hosseini-Maaf B., Hellberg A., Moulds M.K., Sareneva H., et al. Genomic analysis of clinical samples with serologic ABO blood grouping discrepancies: identification of 15 novel A and B subgroup alleles. Blood 2001, 98:1585-1593.
7. Watanabe G., Umetsu K., Yuasa I., Suzuki T. Amplified product length polymorphism (APLP): a novel strategy for genotyping the ABO blood group. Hum Genet 1997, 99:34-37.
8. Yip S.P. Single-tube multiplex PCR-SSCP analysis distinguishable 7 common ABO alleles and readily identifies new alleles. Blood 2000, 95:1487-1492.
9. Yan L., Zhu F., He J. Determining ABO genotypes using GeneScan fragment analysis. Transfusion 2006, 46:1259-1260.
10. Doi Y., Yamamoto Y., Inagaki S., Shigeta Y., Miyaishi S., Ishizu H. A new method for ABO genotyping using a multiplex single-base primer extension reaction and its application to forensic casework samples. Leg Med (Tokyo) 2004, 6:213-223.
11. Ferri G., Bini C., Ceccardi S., Pelotti S. ABO genotyping by minisequencing analysis. Transfusion 2004, 44:943-944.
12. Li LiL., CT LiRY., Sun M., Liu Y., Li Y., Lin Y., et al. ABO genotyping by duplex amplification and oligonucleotide arrays assay. Fa Yi Xue Za Zhi 2004, 20:193-196.
13. Li L., Li C.T., Li R.Y., Liu Y., Lin Y., Que T.Z., et al. SNP genotyping by multiplex amplification and microarrays assay for forensic application. Forensic Sci Int 2006, 162:74-79.
14. Ogasawara K., Bannai M., Saitou N., Yabe R., Nakata K., Takenaka M., et al. Extensive polymorphism of ABO blood group gene: three major lineages of the alleles for the common ABO phenotypes. Hum Genet 1996, 97:777-783.
15. Ogasawara K., Yabe R., Uchikawa M., Saitou N., Bannai M., Nakata K., et al. Molecular genetic analysis of variant phenotypes the ABO blood group system. Blood 1996, 88:2732-2737.
16. Ogasawara K., Yabe R., Uchikawa M., Bannai M., Nakata K., Takenaka M., et al. Different alleles cause an imbalance in A2 and A2B phenotypes of the ABO blood group. Vox Sang 1998, 74:242-247.
17. van der Schoot C.E. Molecular diagnostics in immunohaematology. Vox Sang 2004, 87:189-192.
18. Ringel P.F., Weiler G., Bein G. Errors in ABO typing of blood stains using PCR. Int J Legal Med 2000, 113:352-355.
19. Ferri G., Bini C., Ceccardi S., Ingravallo F., Lugaresi F., Pelotti S. Minisequencing-based genotyping of Duffy and ABO blood groups for forensic purposes. J Forensic Sci 2006, 51:257-360.
20. Li R., Huian Z., Qinnge L. Multicolor real-time PCR genotyping of ABO system using displacing probes. J Forensic Sci 2010, 55:19-24.
21. Yamamoto F., McNeill P.D., Kominato Y., Yamamoto M., Hakomori S., Ishimoto S., et al. Molecular genetic analysis of the ABO blood group system:2. Cis-AB alleles. Vox Sang 1993, 64:112-123.
22. Mifsud N.A., Watt J.M., Condon J.A., Hadadd A.P., Sparrow R.L. A novel cis-AB variant allele arising from a nucleotide substitution A796C in the B transferase gene. Transfusion 2000, 40:1276-1277.
23. Olsson M.L., Guerreiro J.F., Zago M.A., Chester M.A. Molecular analysis of the O alleles at the blood group ABO locus in populations of different ethnic origin reveals novel crossing-over events and point mutations. Biochem Biophys Res Commun 1997, 234:779-782.
24. Grunnet N., Steffensen R., Bennett E.P. Evaluation of histo-blood group ABO genotyping in a Danish population: frequency of a novel O allele defined as O2. Vox Sang 1994, 67:210-215.
25. Mitani T., Tsujita H., Kobayashi T., Yokota M., Akane A. A case of DNA analysis of ABO blood group variant allele A2. Leg Med (Tokyo) 2000, 4:197-201.
26. Satoh K, Itoh Y. Forensic ABO blood grouping by 4 SNPs analyses using ABI PRISM® 3100 genetic analyzer. Progress in Forensic Genetics 11, Elsevier BV, Amsterdam 2006; 49-51.