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Volumn 50, Issue 1, 2012, Pages 76-84

Genetic structure of the common impala (Aepyceros melampus melampus) in South Africa: Phylogeography and implications for conservation

Author keywords

Antelopes; Drakensberg Mountains; Glacial refugia; Microsatellites; Mitochondrial control region

Indexed keywords

GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC STRUCTURE; HOLOCENE; MITOCHONDRIAL DNA; PALEOECOLOGY; PHYLOGEOGRAPHY; UNGULATE;

EID: 84855737091     PISSN: 09475745     EISSN: 14390469     Source Type: Journal    
DOI: 10.1111/j.1439-0469.2011.00638.x     Document Type: Article
Times cited : (11)

References (57)
  • 1
    • 3042739999 scopus 로고    scopus 로고
    • Population genetics of the roan antelope (Hippotragus equinus) with suggestions for conservation
    • Alpers DL, van Vuuren BJ, Arctander P, Robinson TJ (2004) Population genetics of the roan antelope (Hippotragus equinus) with suggestions for conservation. Mol Ecol 13:1771-1784.
    • (2004) Mol Ecol , vol.13 , pp. 1771-1784
    • Alpers, D.L.1    van Vuuren, B.J.2    Arctander, P.3    Robinson, T.J.4
  • 3
    • 0030136465 scopus 로고    scopus 로고
    • Extreme genetic differences among populations of Gazella granti, Grant's gazelle, in Kenya
    • Arctander P, Kat PW, Aman RA, Siegismund HR (1996) Extreme genetic differences among populations of Gazella granti, Grant's gazelle, in Kenya. Heredity 76:465-475.
    • (1996) Heredity , vol.76 , pp. 465-475
    • Arctander, P.1    Kat, P.W.2    Aman, R.A.3    Siegismund, H.R.4
  • 4
    • 0032708406 scopus 로고    scopus 로고
    • Phylogeography of three closely related African bovids (tribe Alcelaphini)
    • Arctander P, Johansen C, Coutellec-Vreto MA (1999) Phylogeography of three closely related African bovids (tribe Alcelaphini). Mol Biol Evol 16:1724-1739.
    • (1999) Mol Biol Evol , vol.16 , pp. 1724-1739
    • Arctander, P.1    Johansen, C.2    Coutellec-Vreto, M.A.3
  • 5
    • 84855739320 scopus 로고    scopus 로고
    • GENETIX (Version 4.05.2). Laboratoire Génome et Populations, CNRS UPR 9060, Université de Montpellier, Montpellier, France
    • Belkhir K (2000) GENETIX (Version 4.05.2). Laboratoire Génome et Populations, CNRS UPR 9060, Université de Montpellier, Montpellier, France.
    • (2000)
    • Belkhir, K.1
  • 6
  • 8
    • 0003935163 scopus 로고    scopus 로고
    • ed, 4th edn. Van Schaik Publishers, Pretoria
    • Bothma JdP(ed) (2002) Game Ranch Management, 4th edn. Van Schaik Publishers, Pretoria.
    • (2002) Game Ranch Management
    • Bothma, J.1
  • 9
    • 0026723216 scopus 로고
    • Ovine dinucleotide repeat polymorphism at the MAF209 locus
    • Buchanan FC, Crawford AM (1992) Ovine dinucleotide repeat polymorphism at the MAF209 locus. Anim Genet 23:183.
    • (1992) Anim Genet , vol.23 , pp. 183
    • Buchanan, F.C.1    Crawford, A.M.2
  • 10
    • 0027582555 scopus 로고
    • Ovine microsatellites at the OarFCB11, OarFCB128, OarFCB193, OarFCB266 and OarFCB304 loci
    • Buchanan FC, Crawford AM (1993) Ovine microsatellites at the OarFCB11, OarFCB128, OarFCB193, OarFCB266 and OarFCB304 loci. Anim Genet 24:145.
    • (1993) Anim Genet , vol.24 , pp. 145
    • Buchanan, F.C.1    Crawford, A.M.2
  • 11
    • 0028373039 scopus 로고
    • Ovine microsatellites at the OarFCB5, OarFCB19, OarFCB20, OarFCB48, OarFCB129 and OarFCB226 loci
    • Buchanan FC, Galloway SM, Crawford AM (1994) Ovine microsatellites at the OarFCB5, OarFCB19, OarFCB20, OarFCB48, OarFCB129 and OarFCB226 loci. Anim Genet 25:60.
    • (1994) Anim Genet , vol.25 , pp. 60
    • Buchanan, F.C.1    Galloway, S.M.2    Crawford, A.M.3
  • 12
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gene genealogies
    • Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Mol Ecol 9:657-1660.
    • (2000) Mol Ecol , vol.9 , pp. 657-1660
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 14
    • 0036900038 scopus 로고    scopus 로고
    • A simulated annealing approach to define the genetic structure of populations
    • Dupanloup I, Schneider S, Excoffier L (2002) A simulated annealing approach to define the genetic structure of populations. Mol Ecol 11:2571-2581.
    • (2002) Mol Ecol , vol.11 , pp. 2571-2581
    • Dupanloup, I.1    Schneider, S.2    Excoffier, L.3
  • 15
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: an integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform Online 1:47-50.
    • (2005) Evol Bioinform Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 16
    • 0003437299 scopus 로고    scopus 로고
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, WA
    • Felsenstein J (2006) Phylip (Phylogeny Inference Package), Version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, WA.
    • (2006) Phylip (Phylogeny Inference Package), Version 3.6
    • Felsenstein, J.1
  • 18
    • 0035544509 scopus 로고    scopus 로고
    • Adaptive evolutionary conservation: towards a unified concept for defining conservation units
    • Fraser DJ, Bernatchez L (2001) Adaptive evolutionary conservation: towards a unified concept for defining conservation units. Mol Ecol 10:2741-2752.
    • (2001) Mol Ecol , vol.10 , pp. 2741-2752
    • Fraser, D.J.1    Bernatchez, L.2
  • 19
    • 84855739323 scopus 로고
    • Polymorphic DNA markers in Bovidae. Patent WO92/13102
    • Georges M, Massey JM (1992) Polymorphic DNA markers in Bovidae. Patent WO92/13102.
    • (1992)
    • Georges, M.1    Massey, J.M.2
  • 20
    • 85007320774 scopus 로고
    • FSTAT (Version 2.9.3.2): A Computer Program to calculate F-Statistics
    • Goudet J (1995) FSTAT (Version 2.9.3.2): A Computer Program to calculate F-Statistics. J Hered 86:485-486.
    • (1995) J Hered , vol.86 , pp. 485-486
    • Goudet, J.1
  • 21
    • 0002872798 scopus 로고
    • Allozyme variation in South African impala populations under different management regimes
    • Grobler JP, Van der Bank FH (1994) Allozyme variation in South African impala populations under different management regimes. S Afr J Wildl Res 24:89-94.
    • (1994) S Afr J Wildl Res , vol.24 , pp. 89-94
    • Grobler, J.P.1    Van der Bank, F.H.2
  • 22
  • 23
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment 746 editor and analysis 747 program for Windows 95/98/NT
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment 746 editor and analysis 747 program for Windows 95/98/NT. Nucleic Acid Sci 41:95-98.
    • (1999) Nucleic Acid Sci , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 24
    • 0034702196 scopus 로고    scopus 로고
    • The genetic legacy of the quaternary ice ages
    • Hewitt GM (2000) The genetic legacy of the quaternary ice ages. Nature 405:907-913.
    • (2000) Nature , vol.405 , pp. 907-913
    • Hewitt, G.M.1
  • 25
    • 33745767361 scopus 로고    scopus 로고
    • The structure of biodiversity - insights from molecular phylogeography
    • Hewitt GM (2004) The structure of biodiversity - insights from molecular phylogeography. Front Zool 1:4.
    • (2004) Front Zool , vol.1 , pp. 4
    • Hewitt, G.M.1
  • 28
    • 0024382879 scopus 로고
    • Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers
    • Kocher TD, Thomas WK, Meyer A (1989) Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc Natl Acad Sci USA 86:6196-6200.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 6196-6200
    • Kocher, T.D.1    Thomas, W.K.2    Meyer, A.3
  • 29
    • 58849089010 scopus 로고    scopus 로고
    • The importance of conservancies for enhancing the value of game ranch land for large mammal conservation in southern Africa
    • Lindsey PA, Romanach SS, Davies-Mostert HT (2009) The importance of conservancies for enhancing the value of game ranch land for large mammal conservation in southern Africa. J Zool 277:99-105.
    • (2009) J Zool , vol.277 , pp. 99-105
    • Lindsey, P.A.1    Romanach, S.S.2    Davies-Mostert, H.T.3
  • 30
    • 4644299074 scopus 로고    scopus 로고
    • No suggestion of hybridization between the vulnerable black-faced impala (Aepyceros melampus petersi) and the common impala (A. m. melampus) in Etosha National Park, Namibia
    • Lorenzen ED, Siegismund HR (2004) No suggestion of hybridization between the vulnerable black-faced impala (Aepyceros melampus petersi) and the common impala (A. m. melampus) in Etosha National Park, Namibia. Mol Ecol 13:3007-3019.
    • (2004) Mol Ecol , vol.13 , pp. 3007-3019
    • Lorenzen, E.D.1    Siegismund, H.R.2
  • 31
    • 33644883949 scopus 로고    scopus 로고
    • Regional genetic structuring and evolutionary history of the impala Aepyceros melampus
    • Lorenzen ED, Arctander P, Siegismund HR (2006) Regional genetic structuring and evolutionary history of the impala Aepyceros melampus. J Hered 97:119-132.
    • (2006) J Hered , vol.97 , pp. 119-132
    • Lorenzen, E.D.1    Arctander, P.2    Siegismund, H.R.3
  • 32
    • 34447646176 scopus 로고    scopus 로고
    • Phylogeography, hybridization and Pleistocene refugia of the kob antelope (Kobus kob)
    • Lorenzen ED, de Neergaard R, Arctander P, Siegismund HR (2007) Phylogeography, hybridization and Pleistocene refugia of the kob antelope (Kobus kob). Mol Ecol 16:3241-3252.
    • (2007) Mol Ecol , vol.16 , pp. 3241-3252
    • Lorenzen, E.D.1    de Neergaard, R.2    Arctander, P.3    Siegismund, H.R.4
  • 33
    • 42549131845 scopus 로고    scopus 로고
    • Three reciprocally monophyletic mtDNA lineages elucidate the taxonomic status of Grant's gazelles
    • Lorenzen ED, Arctander P, Siegismund HR (2008a) Three reciprocally monophyletic mtDNA lineages elucidate the taxonomic status of Grant's gazelles. Conserv Genet 9:593-601.
    • (2008) Conserv Genet , vol.9 , pp. 593-601
    • Lorenzen, E.D.1    Arctander, P.2    Siegismund, H.R.3
  • 34
    • 44849131004 scopus 로고    scopus 로고
    • High variation and very low differentiation in wide ranging plains zebra (Equus quagga): insights from mtDNA and microsatellites
    • Lorenzen ED, Arctander P, Siegismund HR (2008b) High variation and very low differentiation in wide ranging plains zebra (Equus quagga): insights from mtDNA and microsatellites. Mol Ecol 17:2812-2824.
    • (2008) Mol Ecol , vol.17 , pp. 2812-2824
    • Lorenzen, E.D.1    Arctander, P.2    Siegismund, H.R.3
  • 35
    • 75149148041 scopus 로고    scopus 로고
    • A long-standing Pleistocene refugium in southern Africa and a mosaic of refugia in East Africa: insights from mtDNA and the common eland antelope
    • Lorenzen ED, Masembe C, Arctander P, Siegismund HR (2010) A long-standing Pleistocene refugium in southern Africa and a mosaic of refugia in East Africa: insights from mtDNA and the common eland antelope. J Biogeogr 37:571-581.
    • (2010) J Biogeogr , vol.37 , pp. 571-581
    • Lorenzen, E.D.1    Masembe, C.2    Arctander, P.3    Siegismund, H.R.4
  • 36
    • 33748892239 scopus 로고    scopus 로고
    • Three genetically divergent lineages of the Oryx in eastern Africa: evidence for an ancient introgressive hybridization
    • Masembe C, Muwanika VB, Nyakaana S, Arctander P, Siegismund HR (2006) Three genetically divergent lineages of the Oryx in eastern Africa: evidence for an ancient introgressive hybridization. Conserv Genet 7:551-562.
    • (2006) Conserv Genet , vol.7 , pp. 551-562
    • Masembe, C.1    Muwanika, V.B.2    Nyakaana, S.3    Arctander, P.4    Siegismund, H.R.5
  • 37
    • 0033083304 scopus 로고    scopus 로고
    • Mitochondrial DNA population structure of roan and sable antelope: implications for the translocation and conservation of the species
    • Mathee CA, Robinson TJ (1999) Mitochondrial DNA population structure of roan and sable antelope: implications for the translocation and conservation of the species. Mol Ecol 8:227-238.
    • (1999) Mol Ecol , vol.8 , pp. 227-238
    • Mathee, C.A.1    Robinson, T.J.2
  • 38
    • 33846560358 scopus 로고    scopus 로고
    • The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: expansion and retreat with hybridization in the Iberian Peninsula
    • Melo-Ferreira J, Boursot P, Randi E, Kryukov A, Suchentrunk F, Ferrand N, Alves PC (2007) The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: expansion and retreat with hybridization in the Iberian Peninsula. Mol Ecol 16:605-618.
    • (2007) Mol Ecol , vol.16 , pp. 605-618
    • Melo-Ferreira, J.1    Boursot, P.2    Randi, E.3    Kryukov, A.4    Suchentrunk, F.5    Ferrand, N.6    Alves, P.C.7
  • 39
    • 0028151986 scopus 로고
    • Defining 'evolutionary significant units' for conservation
    • Moritz C (1994) Defining 'evolutionary significant units' for conservation. Trends Ecol Evol 9:373-375.
    • (1994) Trends Ecol Evol , vol.9 , pp. 373-375
    • Moritz, C.1
  • 40
    • 0035043497 scopus 로고    scopus 로고
    • Phylogeography and conservation of impala and greater kudu
    • Nersting LG, Arctander P (2001) Phylogeography and conservation of impala and greater kudu. Mol Ecol 10:711-719.
    • (2001) Mol Ecol , vol.10 , pp. 711-719
    • Nersting, L.G.1    Arctander, P.2
  • 41
    • 4344606590 scopus 로고    scopus 로고
    • Micro-checker: software for identifying and correcting genotyping errors in microsatellite data
    • van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535-538.
    • (2004) Mol Ecol Notes , vol.4 , pp. 535-538
    • van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3    Shipley, P.4
  • 42
    • 83555162614 scopus 로고    scopus 로고
    • Genetic analysis of southern African gemsbok (Oryx gazella) reveals high variability, distinct lineages and strong divergence from the East African Oryx beisa
    • doi: in press
    • Osmers B, Petersen B-S, Hartl GB, Grobler JP, Kotze A, Van Aswegen E, Zachos FE (in press) Genetic analysis of southern African gemsbok (Oryx gazella) reveals high variability, distinct lineages and strong divergence from the East African Oryx beisa. Mamm Biol, doi:.
    • Mamm Biol
    • Osmers, B.1    Petersen, B.-S.2    Hartl, G.B.3    Grobler, J.P.4    Kotze, A.5    Van Aswegen, E.6    Zachos, F.E.7
  • 43
    • 0027449857 scopus 로고
    • Warming phases in Southern Africa during the last 150,000years; an overview
    • Partridge T (1993) Warming phases in Southern Africa during the last 150, 000years; an overview. Palaeogeogr Palaeoclimatol Palaeoecol 101:237-244.
    • (1993) Palaeogeogr Palaeoclimatol Palaeoecol , vol.101 , pp. 237-244
    • Partridge, T.1
  • 44
    • 0036752823 scopus 로고    scopus 로고
    • Phylogeographic history of the land snail Candidula unifasciata (Helicellinae, Stylommatophora): fragmentation, corridor migration, and secondary contact
    • Pfenninger M, Posada D (2002) Phylogeographic history of the land snail Candidula unifasciata (Helicellinae, Stylommatophora): fragmentation, corridor migration, and secondary contact. Evolution 56:1776-1788.
    • (2002) Evolution , vol.56 , pp. 1776-1788
    • Pfenninger, M.1    Posada, D.2
  • 45
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly PJ (2000) Inference of population structure using multilocus genotype data. Genetics 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.J.3
  • 46
    • 0000262278 scopus 로고
    • Genepop version 1.2: population genetics software for exact tests and ecumenicism
    • Raymond M, Rousset F (1995) Genepop version 1.2: population genetics software for exact tests and ecumenicism. J Hered 7:248-249.
    • (1995) J Hered , vol.7 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 47
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 49
    • 0032007285 scopus 로고    scopus 로고
    • Population structure of African buffalo inferred from mtDNA sequences and microsatellite loci: high variation but low differentiation
    • Simonsen BT, Siegismund HR, Arctander P (1998) Population structure of African buffalo inferred from mtDNA sequences and microsatellite loci: high variation but low differentiation. Mol Ecol 7:225-237.
    • (1998) Mol Ecol , vol.7 , pp. 225-237
    • Simonsen, B.T.1    Siegismund, H.R.2    Arctander, P.3
  • 51
    • 58149213975 scopus 로고    scopus 로고
    • The extent and impacts of ungulate translocations: South Africa in a global context
    • Spear D, Chown SL (2009) The extent and impacts of ungulate translocations: South Africa in a global context. Biol Conserv 142:353-363.
    • (2009) Biol Conserv , vol.142 , pp. 353-363
    • Spear, D.1    Chown, S.L.2
  • 52
    • 0029786985 scopus 로고    scopus 로고
    • Mitochondrial DNA sequence patterns of Harbour porpoises (Phocoena phocoena) from the North and the Baltic Sea
    • Tiedemann R, Harder J, Gmeiner C, Haase E (1996) Mitochondrial DNA sequence patterns of Harbour porpoises (Phocoena phocoena) from the North and the Baltic Sea. Mamm Biol 61:104-111.
    • (1996) Mamm Biol , vol.61 , pp. 104-111
    • Tiedemann, R.1    Harder, J.2    Gmeiner, C.3    Haase, E.4
  • 53
    • 0036007852 scopus 로고    scopus 로고
    • Phylogeography of the African buffalo based on mitochondrial and Y-chromosomal loci: pleistocene origin and population expansion of the Cape buffalo subspecies
    • Van Hooft WF, Groen AF, Prins HH (2002) Phylogeography of the African buffalo based on mitochondrial and Y-chromosomal loci: pleistocene origin and population expansion of the Cape buffalo subspecies. Mol Ecol 11:267-279.
    • (2002) Mol Ecol , vol.11 , pp. 267-279
    • Van Hooft, W.F.1    Groen, A.F.2    Prins, H.H.3
  • 54
    • 0002917089 scopus 로고
    • The fossil record of African antelopes (Mammalia, Bovidae) in relation to human evolution and paleoclimate
    • Vrba ES, Denton GH, Patridge TC, Burckle LH (eds), Yale University Press, New Haven and London
    • Vrba ES (1995) The fossil record of African antelopes (Mammalia, Bovidae) in relation to human evolution and paleoclimate. In: Vrba ES, Denton GH, Patridge TC, Burckle LH (eds), Paleoclimate and Evolution, with Emphasis on Human Origins. Yale University Press, New Haven and London, pp 385-424.
    • (1995) Paleoclimate and Evolution, with Emphasis on Human Origins , pp. 385-424
    • Vrba, E.S.1
  • 55
    • 67749104828 scopus 로고    scopus 로고
    • Gene trees and species trees - mutual influences and interdependences of population genetics and systematics
    • Zachos FE (2009) Gene trees and species trees - mutual influences and interdependences of population genetics and systematics. J Zoolog Syst Evol Res 47:209-218.
    • (2009) J Zoolog Syst Evol Res , vol.47 , pp. 209-218
    • Zachos, F.E.1
  • 56
    • 77649273028 scopus 로고    scopus 로고
    • First genetic analysis of a free-living population of the threatened goitered gazelle (Gazella subgutturosa)
    • Zachos FE, Karami M, Ibenouazi Z, Hartl GB, Eckert I, Kirschning J (2010a) First genetic analysis of a free-living population of the threatened goitered gazelle (Gazella subgutturosa). Mamm Biol 75:277-282.
    • (2010) Mamm Biol , vol.75 , pp. 277-282
    • Zachos, F.E.1    Karami, M.2    Ibenouazi, Z.3    Hartl, G.B.4    Eckert, I.5    Kirschning, J.6
  • 57
    • 77956166489 scopus 로고    scopus 로고
    • Regional genetic in situ differentiation despite phylogenetic heterogeneity in Alpine mountain hares
    • Zachos FE, Ben Slimen H, Hackländer K, Giacometti M, Suchentrunk F (2010b) Regional genetic in situ differentiation despite phylogenetic heterogeneity in Alpine mountain hares. J Zool 282:47-53.
    • (2010) J Zool , vol.282 , pp. 47-53
    • Zachos, F.E.1    Ben Slimen, H.2    Hackländer, K.3    Giacometti, M.4    Suchentrunk, F.5


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