메뉴 건너뛰기




Volumn 134, Issue , 2012, Pages 32-39

Transcriptome analysis of fruit development of a citrus late-ripening mutant by microarray

Author keywords

CDNA microarray; Flavonol biosynthetic process; GO terms; Hierarchical tree; Spontaneous bud mutation

Indexed keywords

ALCOHOL; ARRAY; CULTIVAR; DEVELOPMENTAL BIOLOGY; DISEASE RESISTANCE; EVERGREEN TREE; FLOWERING; FRUIT; GENE EXPRESSION; GENOME; MUTATION; POLYMERASE CHAIN REACTION; PROTEIN; QUANTITATIVE ANALYSIS;

EID: 84855580887     PISSN: 03044238     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scienta.2011.10.018     Document Type: Article
Times cited : (14)

References (56)
  • 1
    • 33344476119 scopus 로고    scopus 로고
    • Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development
    • Alba R., Payton P., Fei Z.J., McQuinn R., Debbie P., Martin G.B., Tanksley S.D., Giovannoni J.J. Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. The Plant Cell 2005, 17:2954-2965.
    • (2005) The Plant Cell , vol.17 , pp. 2954-2965
    • Alba, R.1    Payton, P.2    Fei, Z.J.3    McQuinn, R.4    Debbie, P.5    Martin, G.B.6    Tanksley, S.D.7    Giovannoni, J.J.8
  • 2
    • 47549114823 scopus 로고    scopus 로고
    • Gene expression in Citrus sinensis (L.) Osbeck after infection with the bacterial pathogen Candidatus Liberibacter asiaticus causing Huanglongbing in Florida
    • Albrecht U., Bowman K.D. Gene expression in Citrus sinensis (L.) Osbeck after infection with the bacterial pathogen Candidatus Liberibacter asiaticus causing Huanglongbing in Florida. Plant Science 2008, 175:291-306.
    • (2008) Plant Science , vol.175 , pp. 291-306
    • Albrecht, U.1    Bowman, K.D.2
  • 4
    • 49049108073 scopus 로고    scopus 로고
    • An evaluation of the basis and consequences of a stay-green mutation in the navel negra citrus mutant using transcriptomic and proteomic profiling and metabolite analysis
    • Alos E., Roca M., Iglesias D.J., Minguez-Mosquera M.I., Damasceno C.M.B., Thannhauser T.W., Rose J.K.C., Talon M., Cercos M. An evaluation of the basis and consequences of a stay-green mutation in the navel negra citrus mutant using transcriptomic and proteomic profiling and metabolite analysis. Plant Physiology 2008, 147:1300-1315.
    • (2008) Plant Physiology , vol.147 , pp. 1300-1315
    • Alos, E.1    Roca, M.2    Iglesias, D.J.3    Minguez-Mosquera, M.I.4    Damasceno, C.M.B.5    Thannhauser, T.W.6    Rose, J.K.C.7    Talon, M.8    Cercos, M.9
  • 6
    • 0006106199 scopus 로고
    • Effect of potassium nutrition on fruit splitting in Valencia orange
    • Bar-Akiva A. Effect of potassium nutrition on fruit splitting in Valencia orange. Journal of Horticultural Science 1975, 85-89.
    • (1975) Journal of Horticultural Science , pp. 85-89
    • Bar-Akiva, A.1
  • 7
    • 0030720923 scopus 로고    scopus 로고
    • Manipulation of fruit set and stylar-end fruit split in 'Nova' mandarin hybrid
    • Barry G.H., Bower J.P. Manipulation of fruit set and stylar-end fruit split in 'Nova' mandarin hybrid. Scientia Horticulturae 1997, 70:243-250.
    • (1997) Scientia Horticulturae , vol.70 , pp. 243-250
    • Barry, G.H.1    Bower, J.P.2
  • 8
    • 0035192313 scopus 로고    scopus 로고
    • The diversification of Citrus clementina Hort. ex Tan., a vegetatively propagated crop species
    • Breto M.P., Ruiz C., Pina J.A., Asins M.J. The diversification of Citrus clementina Hort. ex Tan., a vegetatively propagated crop species. Molecular Phylogenetics and Evolution 2001, 21:285-293.
    • (2001) Molecular Phylogenetics and Evolution , vol.21 , pp. 285-293
    • Breto, M.P.1    Ruiz, C.2    Pina, J.A.3    Asins, M.J.4
  • 10
    • 2442543374 scopus 로고    scopus 로고
    • The transparent testa4 mutation prevents flavonoid synthesis and alters auxin transport and the response of Arabidopsis roots to gravity and light
    • Buer C.S., Muday G.K. The transparent testa4 mutation prevents flavonoid synthesis and alters auxin transport and the response of Arabidopsis roots to gravity and light. The Plant Cell 2004, 16:1191-1205.
    • (2004) The Plant Cell , vol.16 , pp. 1191-1205
    • Buer, C.S.1    Muday, G.K.2
  • 15
    • 40549115322 scopus 로고    scopus 로고
    • Advances in worldwide citrus breeding
    • (in Chinese)
    • Deng X.X. Advances in worldwide citrus breeding. Acta Horticulturae Sinica 2005, 32:1140-1146. (in Chinese).
    • (2005) Acta Horticulturae Sinica , vol.32 , pp. 1140-1146
    • Deng, X.X.1
  • 17
    • 77954299992 scopus 로고    scopus 로고
    • AgriGO: a GO analysis toolkit for the agricultural community
    • Du Z., Zhou X., Ling Y., Zhang Z.H., Su Z. agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Research 2010, 38:64-70.
    • (2010) Nucleic Acids Research , vol.38 , pp. 64-70
    • Du, Z.1    Zhou, X.2    Ling, Y.3    Zhang, Z.H.4    Su, Z.5
  • 18
    • 0002660285 scopus 로고
    • The general physiology of citrus
    • Div. Agric. Sci., Univ. of California, Berkeley
    • Erickson L.C. The general physiology of citrus. The Citrus Industry 1967, vol. 2:86-126. Div. Agric. Sci., Univ. of California, Berkeley. rev. ed.
    • (1967) The Citrus Industry , vol.2 , pp. 86-126
    • Erickson, L.C.1
  • 19
    • 0030762202 scopus 로고    scopus 로고
    • Identification of closely related citrus cultivars with inter-simple sequence repeat markers
    • Fang D.Q., Roose M.L. Identification of closely related citrus cultivars with inter-simple sequence repeat markers. Theoretical and Applied Genetics 1997, 95:408-417.
    • (1997) Theoretical and Applied Genetics , vol.95 , pp. 408-417
    • Fang, D.Q.1    Roose, M.L.2
  • 20
    • 0037253237 scopus 로고    scopus 로고
    • Analysis of a spontaneous mutant and selected clones of cv. Italia (Vitis vinifera) by AFLP markers
    • Fanizza G., Chaabane R., Ricciardi L., Resta P. Analysis of a spontaneous mutant and selected clones of cv. Italia (Vitis vinifera) by AFLP markers. Vitis 2003, 42:27-30.
    • (2003) Vitis , vol.42 , pp. 27-30
    • Fanizza, G.1    Chaabane, R.2    Ricciardi, L.3    Resta, P.4
  • 22
    • 57849148656 scopus 로고    scopus 로고
    • A Rapid and effective method for RNA extraction from different tissues of grapevine and other woody plants
    • Gambino G., Perrone I., Gribaudo I. A Rapid and effective method for RNA extraction from different tissues of grapevine and other woody plants. Phytochemical Analysis 2008, 19:520-525.
    • (2008) Phytochemical Analysis , vol.19 , pp. 520-525
    • Gambino, G.1    Perrone, I.2    Gribaudo, I.3
  • 26
    • 0006125314 scopus 로고
    • Effects of gibberellin and girdling on the yield of 'Nova' (Clementine×Orlando tangelo) and 'Niva' (Valencia×Wilking)
    • Goren R., Huberman M., Riov J. Effects of gibberellin and girdling on the yield of 'Nova' (Clementine×Orlando tangelo) and 'Niva' (Valencia×Wilking). Proceedings of International Society of Citriculture 1992, 1:493-499.
    • (1992) Proceedings of International Society of Citriculture , vol.1 , pp. 493-499
    • Goren, R.1    Huberman, M.2    Riov, J.3
  • 27
    • 0035056108 scopus 로고    scopus 로고
    • Lemons: diversity and relationships with selected Citrus genotypes as measured with nuclear genome markers
    • Gulsen O., Roose M.L. Lemons: diversity and relationships with selected Citrus genotypes as measured with nuclear genome markers. Journal of American Society for Horticultural Science 2001, 126:309-317.
    • (2001) Journal of American Society for Horticultural Science , vol.126 , pp. 309-317
    • Gulsen, O.1    Roose, M.L.2
  • 28
    • 0012335274 scopus 로고
    • Naturally occurring auxin transport regulators
    • Jacobs M., Rubery P.H. Naturally occurring auxin transport regulators. Science 1988, 241:346-349.
    • (1988) Science , vol.241 , pp. 346-349
    • Jacobs, M.1    Rubery, P.H.2
  • 29
    • 77349084674 scopus 로고    scopus 로고
    • Comprehensive expression analysis suggests overlapping and specific roles of rice glutathione S-transferase genes during development and stress responses
    • Jain M., Ghanashyam C., Bhattacharjee A. Comprehensive expression analysis suggests overlapping and specific roles of rice glutathione S-transferase genes during development and stress responses. BMC Genomics 2010, 11:73-90.
    • (2010) BMC Genomics , vol.11 , pp. 73-90
    • Jain, M.1    Ghanashyam, C.2    Bhattacharjee, A.3
  • 30
    • 25444502609 scopus 로고    scopus 로고
    • PAGE: parametric analysis of gene set enrichment
    • Kim S.Y., Volsky D. PAGE: parametric analysis of gene set enrichment. BMC Bioinformatics 2005, 6:144-156.
    • (2005) BMC Bioinformatics , vol.6 , pp. 144-156
    • Kim, S.Y.1    Volsky, D.2
  • 31
    • 25444469954 scopus 로고    scopus 로고
    • GObar: a gene ontology based analysis and visualization tool for gene sets
    • Lee J.S., Katari G., Sachidanandam R. GObar: a gene ontology based analysis and visualization tool for gene sets. BMC Bioinformatics 2005, 6:189-201.
    • (2005) BMC Bioinformatics , vol.6 , pp. 189-201
    • Lee, J.S.1    Katari, G.2    Sachidanandam, R.3
  • 32
    • 17744413236 scopus 로고    scopus 로고
    • Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application
    • Research 0032.1-Research 0032.11
    • Li C., Wong W.H. Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application. Genome Biology 2001, 2. Research 0032.1-Research 0032.11.
    • (2001) Genome Biology , vol.2
    • Li, C.1    Wong, W.H.2
  • 33
    • 62349142267 scopus 로고    scopus 로고
    • Transcriptome analysis of a spontaneous mutant in sweet orange [Citrus sinensis (L.) Osbeck] during fruit development
    • Liu Q., Zhou A.D., Chai L.J., Zhou W.J., Yu K.Q., Ding J., Xu J., Deng X.X. Transcriptome analysis of a spontaneous mutant in sweet orange [Citrus sinensis (L.) Osbeck] during fruit development. Journal of experimental botany 2009, 60:801-813.
    • (2009) Journal of experimental botany , vol.60 , pp. 801-813
    • Liu, Q.1    Zhou, A.D.2    Chai, L.J.3    Zhou, W.J.4    Yu, K.Q.5    Ding, J.6    Xu, J.7    Deng, X.X.8
  • 34
    • 49849117419 scopus 로고
    • Methods of forecasting the ripening dates of citrus fruit in various regions of Israel
    • Lomas J., Gat Z., Shifrin B. Methods of forecasting the ripening dates of citrus fruit in various regions of Israel. Agricultural Meteorology 1970, 7:321-327.
    • (1970) Agricultural Meteorology , vol.7 , pp. 321-327
    • Lomas, J.1    Gat, Z.2    Shifrin, B.3
  • 35
    • 33947402232 scopus 로고    scopus 로고
    • Analysis of bud sport cultivars of peach (Prunus persica (L.) Batsch) by simple sequence repeats (SSR) and restriction landmark genomic scanning (RLGS)
    • Mase N., Iketani H., Sato Y. Analysis of bud sport cultivars of peach (Prunus persica (L.) Batsch) by simple sequence repeats (SSR) and restriction landmark genomic scanning (RLGS). Journal of the Japanese Society for Horticultural Science 2007, 76:20-27.
    • (2007) Journal of the Japanese Society for Horticultural Science , vol.76 , pp. 20-27
    • Mase, N.1    Iketani, H.2    Sato, Y.3
  • 38
    • 0006036473 scopus 로고
    • Additional experiments to reduce the incidence of citrus fruit splitting by 2, 4-D and calcium
    • Monselise S.P., Costo J., Galili D. Additional experiments to reduce the incidence of citrus fruit splitting by 2, 4-D and calcium. Alon Hanotea 1986, 40:1237-1238.
    • (1986) Alon Hanotea , vol.40 , pp. 1237-1238
    • Monselise, S.P.1    Costo, J.2    Galili, D.3
  • 39
    • 0035451708 scopus 로고    scopus 로고
    • Oranges and lemons: clues to the taxonomy of citrus from molecular markers
    • Moore G.A. Oranges and lemons: clues to the taxonomy of citrus from molecular markers. Trends in Genetics 2001, 17:536-540.
    • (2001) Trends in Genetics , vol.17 , pp. 536-540
    • Moore, G.A.1
  • 41
    • 0032803271 scopus 로고    scopus 로고
    • White anther: a petunia mutant that abolishes pollen flavonol accumulation, induces male sterility, and is complemented by a chalcone synthase transgene
    • Napoli C.A., Fahy D., Wang H.Y., Taylor L.P. White anther: a petunia mutant that abolishes pollen flavonol accumulation, induces male sterility, and is complemented by a chalcone synthase transgene. Plant Physiology 1999, 120:615-622.
    • (1999) Plant Physiology , vol.120 , pp. 615-622
    • Napoli, C.A.1    Fahy, D.2    Wang, H.Y.3    Taylor, L.P.4
  • 42
    • 3142675769 scopus 로고    scopus 로고
    • Variation in expression and protein localization of the PIN family of auxin efflux facilitator proteins in flavonoid mutants with altered auxin transport in Arabidopsis thaliana
    • Peer W.A., Bandyopadhyay A., Blakeslee J.J., Makam S.S., Chen R.J., Masson P.H., Murphy A.S. Variation in expression and protein localization of the PIN family of auxin efflux facilitator proteins in flavonoid mutants with altered auxin transport in Arabidopsis thaliana. The Plant Cell 2004, 16:1898-1911.
    • (2004) The Plant Cell , vol.16 , pp. 1898-1911
    • Peer, W.A.1    Bandyopadhyay, A.2    Blakeslee, J.J.3    Makam, S.S.4    Chen, R.J.5    Masson, P.H.6    Murphy, A.S.7
  • 43
    • 0030019104 scopus 로고    scopus 로고
    • Gibberellic acid sprays, girdling, flower thinning and potassium applications affect fruit splitting and yield in the 'Ellendale' tangor
    • Rabe E., Rensburg P.J.J.V. Gibberellic acid sprays, girdling, flower thinning and potassium applications affect fruit splitting and yield in the 'Ellendale' tangor. The Journal of Horticultural Science & Biotechnology 1996, 71:195-204.
    • (1996) The Journal of Horticultural Science & Biotechnology , vol.71 , pp. 195-204
    • Rabe, E.1    Rensburg, P.J.J.V.2
  • 44
    • 57749116328 scopus 로고    scopus 로고
    • The modified flavonol glycosylation profile in the Arabidopsis rol1 mutants results in alterations in plant growth and cell shape formation
    • Ringli C., Bigler L., Kuhn B.M., Leiber R.M., Diet A., Santelia D., Frey B., Pollmann S., Klein M. The modified flavonol glycosylation profile in the Arabidopsis rol1 mutants results in alterations in plant growth and cell shape formation. The Plant Cell 2008, 20:1470-1481.
    • (2008) The Plant Cell , vol.20 , pp. 1470-1481
    • Ringli, C.1    Bigler, L.2    Kuhn, B.M.3    Leiber, R.M.4    Diet, A.5    Santelia, D.6    Frey, B.7    Pollmann, S.8    Klein, M.9
  • 45
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena M., Shalon D., Davis R.W., Brown P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 1995, 270:467-470.
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 46
    • 0008690615 scopus 로고
    • Flavanoids in pollen and stigma of brassica oleracea and their effects on pollen germination in vitro
    • Sedgley M. Flavanoids in pollen and stigma of brassica oleracea and their effects on pollen germination in vitro. Annals of Botany 1975, 39:1091-1095.
    • (1975) Annals of Botany , vol.39 , pp. 1091-1095
    • Sedgley, M.1
  • 51
    • 0026826809 scopus 로고
    • Antisense inhibition of flavonoid biosynthesis in petunia anthers results in male sterility
    • Van der Meer I.M., Stam M.E., Van Tunen A.J., Mol J., Stuitje A.R. Antisense inhibition of flavonoid biosynthesis in petunia anthers results in male sterility. The Plant Cell 1992, 4:253-262.
    • (1992) The Plant Cell , vol.4 , pp. 253-262
    • Van der Meer, I.M.1    Stam, M.E.2    Van Tunen, A.J.3    Mol, J.4    Stuitje, A.R.5
  • 52
    • 0242636848 scopus 로고    scopus 로고
    • Cloning, regulation of messenger ribonucleic acid expression, and function of a new isoform of pituitary adenylate cyclase-activating polypeptide in the zebrafish ovary
    • Wang Y.J., Wong A.O.L., Ge W. Cloning, regulation of messenger ribonucleic acid expression, and function of a new isoform of pituitary adenylate cyclase-activating polypeptide in the zebrafish ovary. Endocrinology 2003, 144:4799-4810.
    • (2003) Endocrinology , vol.144 , pp. 4799-4810
    • Wang, Y.J.1    Wong, A.O.L.2    Ge, W.3
  • 54
    • 0028094003 scopus 로고
    • Flavonols and fertilization in Petunia hybrida: localization and mode of action during pollen tube growth
    • Ylstra B., Busscher J., Franken J., Hollman P.C.H., Mol J.N.M., van Tunen A.J. Flavonols and fertilization in Petunia hybrida: localization and mode of action during pollen tube growth. The Plant Journal 1994, 6:201-212.
    • (1994) The Plant Journal , vol.6 , pp. 201-212
    • Ylstra, B.1    Busscher, J.2    Franken, J.3    Hollman, P.C.H.4    Mol, J.N.M.5    van Tunen, A.J.6
  • 56
    • 62349125145 scopus 로고    scopus 로고
    • Advances in research of citrus cultivars selected by bud mutation and the mechanism of formation of mutated characteristics
    • (in Chinese)
    • Zhang M., Deng X.X. Advances in research of citrus cultivars selected by bud mutation and the mechanism of formation of mutated characteristics. Journal of Fruit Science 2006, 23:871-876. (in Chinese).
    • (2006) Journal of Fruit Science , vol.23 , pp. 871-876
    • Zhang, M.1    Deng, X.X.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.