Quantitative trait loci for sugarcane resistance to the spotted stem borer Chilo sacchariphagus

Molecular Breeding

Volumn 29, Issue 1, 2012, Pages 129-135

  Nibouche, S ^a   Raboin, L M ^a   Hoarau, J Y ^b   D'Hont, A ^b   Costet, L ^a  

^a Institut National de la Recherche Agronomique   (France)

^b CIRAD   (France)

Author keywords

Quantitative trait allele (QTA); Spotted stem borer (SSB); Sugarcane

Indexed keywords

PLANTS (BOTANY); SUGAR CANE;

BREEDING PROGRAMMES; GENETIC BASIS; MAPPING STUDIES; QUANTITATIVE TRAIT ALLELE; QUANTITATIVE TRAIT LOCUS; QUANTITATIVE TRAITS; SELFING; SPOTTED STEM BORER; SUCROSE YIELD; SUGARCANE;

GENES;

CHILO SACCHARIPHAGUS;

EID: 84855531818     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-010-9531-0     Document Type: Article

References (29)

1. Aitken K, Hermann S, Karno K, Bonnett G, McIntyre L, Jackson P (2008) Genetic control of yield related stalk traits in sugarcane. Theor Appl Genet 117: 1191-1203.
2. Bezuidenhout CN, Goebel R, Hull PJ, Hull PJ, Schulze RE, Maharaj M (2008) Assessing the potential threat of Chilo sacchariphagus (Lepidoptera: Crambidae) as a pest in South Africa and Swaziland: realistic scenarios based on climatic indices. Afr Entomol 16: 86-90. doi: 10. 4001/1021-3589-16. 1. 86.
3. Butterfield M, Rutherford R, Carson D, Huckett B (2004) Application of gene discovery to varietal improvement in sugarcane. S Afr J Bot 70: 167-172.
4. Churchill GA, Doerge RW (1994) Empirical Threshold Values for Quantitative Trait Mapping. Genetics 138: 963-971.
5. Da Silva JA, White WH, Setamou M, Solis-Garcia N (2005) A molecular approach to breeding for stemborer resistance in sugarcane. In: Hogarth DM (ed) Proceedings of the XXV Congress of the international society of sugar cane technologists, January 30-February 4, Guatemala City, Guatemala, 2005. ISSCT, pp 487-491.
6. Daugrois JH, Grivet L, Roques D, Hoarau JY, Lombard H, Glaszmann JC, D'Hont A (1996) A putative major gene for rust resistance linked with a RFLP marker in sugarcane cultivar 'R570'. Theor Appl Genet 92: 1059-1064.
7. Gallais A (1990) Théorie de la sélection en amélioration des plantes. Masson, Paris.
8. Goebel R (1999) Caractéristiques biotiques du foreur de la canne à sucre Chilo sacchariphagus (Bojer, 1856) (Lepidoptera: Pyralidae) à l'île de la Réunion. Facteurs de régulation de ses populations et conséquences pour la lutte contre ce ravageur. Université Paul Sabatier, Toulouse.
9. Goebel R, Fernandez E, Tibère R, Alauzet C (1999) Dégâts et pertes de rendement sur la canne à sucre dus au foreur Chilo sacchariphagus (Bojer) à l'île de la Réunion (Lep.: Pyralidae). Ann Soc Entomol France 35(Supp): 476-481.
10. Grivet L, D'Hont A, Roques D, Feldmann P, Lanaud C, Glaszmann JC (1996) RFLP mapping in cultivated sugarcane (Saccharum spp.): genome organization in a highly polyploid and aneuploid interspecific hybrid. Genetics 142: 987-1000.
11. Hoarau JY, Offmann B, D'Hont A, Risterucci AM, Roques D, Glaszmann JC, Grivet L (2001) Genetic dissection of a modern sugarcane cultivar (Saccharum spp.). I. Genome mapping with AFLP markers. TAG Theor Appl Genet 103: 84-97.
12. Hoarau JY, Grivet L, Offmann B, Raboin LM, Diorflar JP, Payet J, Hellmann M, D'Hont A, Glaszmann JC (2002) Genetic dissection of a modern sugarcane cultivar (Saccharum spp.). II. Detection of QTLs for yield components. Theor Appl Genet 105: 1027-1037.
13. Holland JB (2006) Estimating genotypic correlations and their standard errors using multivariate restricted likelihood estimation with SAS proc mixed. Crop Sci 46: 642-654.
14. Hulbert SH, Webb CA, Smith SM, Sun Q (2001) Resistance gene complexes: evolution and utilization. Ann Rev Phytopathol 39: 285-312. doi: 10. 1146/annurev. phyto. 39. 1. 285.
15. Jannoo N, Grivet L, David J, D'Hont A, Glaszmann JC (2004) Differential chromosome pairing affinities at meiosis in polyploidy sugarcane revealed by molecular markers. Heredity 93: 460-467.
16. Lander E, Kruglyak L (1995) Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results. Nature Genet 11: 241-247.
17. Littel RC, Milliken GA, Stroup WW, Wolfinger RD, Schabenberger O (2006) SAS system for mixed models, 2nd edn. SAS Institute Inc., Cary.
18. Martin G, Brommonschenkel S, Chunwongse J, Frary A, Ganal M, Spivey R, Wu T, Earle E, Tanksley S (1993) Map-based cloning of a protein kinase gene conferring disease resistance in tomato. Science 262: 1432-1436.
19. McIntyre C, Casu R, Drenth J, Knight D, Whan V, Croft B, Jordan D, Manners J (2005) Resistance gene analogues in sugarcane and sorghum and their association with quantitative trait loci for rust resistance. Genome 48: 391-400.
20. McMullen MD, Simcox KD (1995) Genomic organization of disease and insect resistance genes in maize. Mol Plant-Microbe Interact 8: 811-815.
21. Metcalfe JR (1969) The estimation of loss caused by sugar cane moth borers. In: Williams JR, Metcalfe JR, Mungomery RW, Mathes R (eds) Pests of sugarcane. Elsevier Publishing Company, Amsterdam, pp 61-79.
22. Ming R, Wang Y, Draye X, Moore P, Irvine J, Paterson A (2002) Molecular dissection of complex traits in autopolyploids: mapping QTLs affecting sugar yield and related traits in sugarcane. Theor Appl Genet 105: 332-345.
23. Nibouche S, Tibere R (2010) Mechanism of resistance to the spotted stalk borer, Chilo sacchariphagus, in the sugarcane cultivar R570. Entomol Exp Appl 135: 308-314. doi: 10. 1111/j. 1570-7458. 2010. 00996. x.
24. Nibouche S, Tibère R (2008) Damage assessment for selection of resistance to the spotted stalk borer and genetic correlations for resistance and yield components in sugarcane. Plant Breed 127: 38-42. doi: 10. 1111/j. 1439-0523. 2008. 01391. x.
25. Raboin L, Oliveira K, Lecunff L, Telismart H, Roques D, Butterfield M, Hoarau J, D'Hont A (2006) Genetic mapping in sugarcane, a high polyploid, using bi-parental progeny: identification of a gene controlling stalk colour and a new rust resistance gene. Theor and Appl Genet 112: 1382-1391.
26. Rossi M, Araujo PG, Paulet F, Garsmeur O, Dias VM, Chen H, van Sluys MA, D'Hont A (2003) Genomic distribution and characterization of EST-derived resistance gene analogs (RGAs) in surgarcane. Mol Genet Genomics 269: 406-419.
27. Sakamoto K, Tada Y, Yokozeki Y, Akagi H, Hayashi N, Fujimura T, Ichikawa N (1999) Chemical induction of disease resistance in rice is correlated with the expression of a gene encoding a nucleotide binding site and leucine-rich repeats. Plant Mol Biol 40: 847-855.
28. SAS Institute (2004) SAS OnlineDoc® 9. 1. 3. SAS Institute Inc, Cary.
29. Selvi A, Mukunthan N, Shanthi RM, Govindaraj P, Singaravelu B, Karthik Prabu T (2008) Assessment of genetic relationships and marker identification in sugarcane cultivars with different levels of top borer resistance. Sugar Tech 10: 53-59.