Evaluation of the celite secondary concentration procedure and an alternate elution buffer for the recovery of enteric adenoviruses 40 and 41

Journal of Virological Methods

Volumn 179, Issue 2, 2012, Pages 423-428

  McMinn, Brian R ^a   Cashdollar, Jennifer L ^a   Grimm, Ann C ^a   Fout, G Shay ^a  

^a U S ENVIRONMENTAL PROTECTION AGENCY   (United States)

Author keywords

Adenovirus 40 and 41; Celite concentration; Organic flocculation

Indexed keywords

BUFFER; ELUTION BUFFER; INFUSORIAL EARTH; PHOSPHATE BUFFERED SALINE; SODIUM CARBONATE; SODIUM DIHYDROGEN PHOSPHATE; UNCLASSIFIED DRUG;

ADENOVIRUS; ADENOVIRUS 40; ADENOVIRUS 41; ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; DNA EXTRACTION; EXTRACTION; FLOCCULATION; HEAT; HEAT EXTRACTION; MICROBIOLOGICAL EXAMINATION; NONHUMAN; PARTICLE SIZE; PRIORITY JOURNAL; PROCESS OPTIMIZATION; REAL TIME POLYMERASE CHAIN REACTION; SAMPLE; SECONDARY CONCENTRATION PROCEDURE;

ADENOVIRIDAE; ANIMALS; BUFFERS; DIATOMACEOUS EARTH; HUMANS; SPECIMEN HANDLING; VIROLOGY; WATER MICROBIOLOGY;

ADENOVIRIDAE;

EID: 84855505828     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2011.11.017     Document Type: Article

References (26)

1. Dahling D.R. An improved filter elution and cell culture assay procedure for evaluating public groundwater systems for culturable enteroviruses. Water Environ. Res. 2002, 74:564-568.
2. Dahling D.R., Wright B.A. Recovery of viruses from water by a modified flocculation procedure for second-step concentration. Appl. Environ. Microbiol. 1986, 51:1326-1331.
3. Damen M., Minnaar R., Glasius P., Van der Ham A., Koen G., Wertheim P., Beld M. Real-time PCR with an internal control for detection of all known human adenovirus serotypes. J. Clin. Microbiol. 2008, 46:3997-4003.
4. Enriquez C.E., Hurst C.J., Gerba C.P. Survival of enteric adenoviruses 40 and 41 in tap, sea, and wastewater. Water Res. 1995, 29:2548-2553.
5. Fong T.T., Phanikumar M.S., Xagoraraki I., Rose J.B. Quantitative detection of human adenoviruses in wastewater and combined sewer overflows influencing a Michigan river. Appl. Environ. Microbiol. 2009, 76:715-723.
6. Fout G.S., Martinson B.C., Moyer M.W., Dahling D.R. A multiplex reverse transcription-PCR method for detection of human enteric viruses in groundwater. Appl. Environ. Microbiol. 2003, 69:3158-3164.
7. Fout G.S., Schaefer F.S., Messer J.W., Dahling D.R. ICR Microbial Laboratory Manual 1996, US Environmental Protection Agency, Washington, p. 178 Publication no. EPA/600/R-95/.
8. Haramoto E., Kitajima M., Katayama H., Ohgaki S. Real-time PCR detection of adenoviruses, polyomaviruses, and torque teno viruses in river water in Japan. Water Res. 2010, 44:1747-1752.
9. Heerden J., Ehlers M.M., Vivier J.C., Grabow W.O. Risk assessment of adenoviruses detected in treated drinking water and recreational water. J. Appl. Microbiol. 2005, 99:926-933.
10. Jothikumar N., Cromeans T.L., Hill V.H., Lu X., Sobsey M.D., Erdman D.R. Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41. Appl. Environ. Microbiol. 2005, 71:3131-3136.
11. Karim M.R., Rhodes E.R., Brinkman N., Wymer L., Fout G.S. New electropositive filter for concentrating enteroviruses and noroviruses from large volumes of water. Appl. Environ. Microbiol. 2009, 75:2393-2399.
12. Katzenelson E., Fattal B., Hostovesky T. Organic flocculation: an efficient second-step concentration method for the detection of viruses in tap water. Appl. Environ. Microbiol. 1976, 32:638-639.
13. Ko G., Cromeans T.L., Sobsey M.D. UV inactivation of adenovirus type 41 measured by cell culture mRNA RT-PCR. Water Res. 2005, 39:3643-3649.
14. Lambertini E., Spencer S.K., Bertz P.D., Loge F.J., Kieke B.A., Borchardt M.A. Concentration of enteroviruses, adenoviruses, and noroviruses from drinking water by use of glass wool filters. Appl. Environ. Microbiol. 2008, 74:2990-2996.
15. Levidiotou S., Gartzonika C., Papaventsis D., Christaki C., Priavali E., Zotos N., Kapsali E., Vrioni G. Viral agents of acute gastroenteritis in hospitalized children in Greece. Clin. Microbiol. Infect. 2009, 15:596-598.
16. Lewis G.D., Metcalf T.G. Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and human rotavirus, from oyster, water, and sediment samples. Appl. Environ. Microbiol. 1988, 54:1983-1988.
17. Lipp E.K., Futch J.C., Griffin D.W. Analysis of multiple enteric viral targets as sewage markers in coral reefs. Mar. Pollut. Bull. 2007, 54:1897-1902.
18. Melnick J.L., Safferman R., Rao V.C., Goyal S., Berg G., Dahling D.R., Wright B.A., Akin E., Stetler R., Sorber C. Round robin investigation of methods for the recovery of polio virus from drinking water. Appl. Environ. Microbiol. 1984, 47:144-150.
19. Mena K.D., Gerba C.P. Waterborne adenoviruses. Rev. Environ. Contam. Toxicol. 2009, 198:133-167.
20. Nakanishi K., Tsugawa T., Honma S., Nakata S., Tatsumi M., Yoto Y., Tsutsumi H. Detection of enteric viruses in rectal swabs from children with acute gastroenteritis attending the pediatric outpatient clinics in Sapporo, Japan. J. Clin. Virol. 2009, 46:94-97.
21. Schwab K.J., Leon R.D., Sobsey M.D. Concentration and purification of beef extract mock eluates from water samples for the detection of enteroviruses, hepatitis A virus, and Norwalk virus by reverse transcription-PCR. Appl. Environ. Microbiol. 1995, 61:531-537.
22. Shin G.A., Lee J.K., Linden K.G. Enhanced effectiveness of medium-pressure ultraviolet lamps on human adenovirus 2 and its possible mechanism. Water Sci. Technol. 2009, 60:851-857.
23. Sinclair R.G., Jones E.L., Gerba C.P. Viruses in recreational water-borne disease outbreaks: a review. J. Appl. Microbiol. 2009, 107:1769-1780.
24. Svraka S., Duizer E., Vennema H., de Bruin E., van der Veer B., Dorresteljn B., Koopmans M. Etiological role of viruses in outbreaks of acute gastroenteritis in The Netherlands from 1994 through 2005. J. Clin. Microbiol. 2007, 45:1389-1394.
25. USEPA Manual of Methods for Virology. EPA/600/4-84/013 1984, U.S. Environmental Protection Agency, Washington, DC.
26. Xagoraraki I., Kuo D.H., Wong K., Wong M., Rose J.B. Occurrence of human adenoviruses at two recreational beaches of the great lakes. Appl. Environ. Microbiol. 2007, 73:7874-7881.