Backbone assignment of the little finger domain of a Y-family DNA polymerase

Biomolecular NMR Assignments

Volumn 5, Issue 2, 2011, Pages 195-198

  Ma, Dejian ^a   Fowler, Jason D ^a   Suo, Zucai ^a  

^a OHIO STATE UNIVERSITY   (United States)

Author keywords

Backbone resonance assignments; Heteronuclear NMR; Little finger domain; Sulfolobus solfataricus Dpo4; Y family DNA polymerases

Indexed keywords

ARCHAEAL PROTEIN; CARBON; DNA DIRECTED DNA POLYMERASE BETA; NITROGEN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; ENZYMOLOGY; MOLECULAR GENETICS; NUCLEAR MAGNETIC RESONANCE; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; SULFOLOBUS SOLFATARICUS;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; CARBON ISOTOPES; DNA POLYMERASE BETA; MOLECULAR SEQUENCE DATA; NITROGEN ISOTOPES; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SULFOLOBUS SOLFATARICUS;

EID: 84855394776     PISSN: 18742718     EISSN: 1874270X     Source Type: Journal    
DOI: 10.1007/s12104-011-9298-1     Document Type: Article

References (10)

1. Boudsocq F et al (2004) Investigating the role of the little finger domain of Y-family DNA polymerases in low fidelity synthesis and translesion replication. J Biol Chem 279(31): 32932-32940
2. Delaglio F et al (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 6(3): 277-293
3. Fiala KA, Suo Z (2004) Pre-steady-state kinetic studies of the fidelity of Sulfolobus solfataricus P2 DNA polymerase IV. Biochemistry 43(7): 2106-2115
4. Grzesiek S, Bax A (1992) Improved 3D triple-resonance NMR techniques applied to a 31 kDa protein. J Magn Reson 96: 432-440
5. Grzesiek S, Bax A (1993) Amino acid type determination in the sequential assignment procedure of uniformly 13C/15 N-enriched proteins. J Biomol NMR 3(2): 185-204
6. Jung YS, Zweckstetter M (2004) Mars-robust automatic backbone assignment of proteins. J Biomol NMR 30(1): 11-23
7. Ma D et al (2010) Backbone assignment of the catalytic core of a Y-family DNA polymerase. Biomol NMR Assign 4(2):3
8. Sattler M et al (1995) A simultaneous 15 N, 1H- and 13C, 1H-HSQC with sensitivity enhancement and a heteronuclear gradient echo. J Biomol NMR 5(1): 97-102
9. Wong JH et al (2008) Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4. J Mol Biol 379(2): 317-330
10. Xu C et al (2009) Global conformational dynamics of a Y-family DNA polymerase during catalysis. PLoS Biol 7(10):e1000225