An Extracellular S1-Type Nuclease of Marine Fungus Penicillium melinii

Marine Biotechnology

Volumn 14, Issue 1, 2012, Pages 87-95

  Balabanova, Larissa A ^a   Gafurov, Yury M ^a   Pivkin, Mikhael V ^a   Terentyeva, Natalya A ^a   Likhatskaya, Galina N ^a   Rasskazov, Valery A ^a  

^a PACIFIC INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

Author keywords

DNAse; Endonuclease; Marine fungi; Penicillium melinii; PSG 1; S1 P1 nuclease

Indexed keywords

DNASE; ENDONUCLEASES; PENICILLIUM MELINII; PSG-1; S1/P1 NUCLEASE;

BIOCHEMISTRY; CELL CULTURE; DNA; FUNGI; OLIGONUCLEOTIDES; PURIFICATION; RNA;

ENZYME ACTIVITY;

FUNGAL PROTEIN; NUCLEASE S1;

BIOTECHNOLOGY; CHITIN; ENVIRONMENTAL CONDITIONS; ENZYME ACTIVITY; FUNGUS; GENETIC ANALYSIS; HOMOLOGY; MARINE TECHNOLOGY; PREGNANCY; PROTEIN; PURIFICATION; SPORE;

AMINO ACID SEQUENCE; ARTICLE; ENZYME SPECIFICITY; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MOLECULAR GENETICS; PENICILLIUM; PH; PHYSIOLOGY; TEMPERATURE;

AMINO ACID SEQUENCE; FUNGAL PROTEINS; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, FUNGAL; HYDROGEN-ION CONCENTRATION; MOLECULAR SEQUENCE DATA; PENICILLIUM; SINGLE-STRAND SPECIFIC DNA AND RNA ENDONUCLEASES; SUBSTRATE SPECIFICITY; TEMPERATURE;

KURIL ISLANDS; PACIFIC OCEAN; RUSSIAN FEDERATION; SAKHALIN; SEA OF OKHOTSK; SHIKOTAN;

FUNGI; PENICILLIUM; PENICILLIUM MELINII;

EID: 84855345896     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-011-9392-5     Document Type: Article

References (33)

1. Artemchuk NY (1981) Microflora of USSR seas. Nauka, Moscow.
2. Bilai VI (1982) Definition of the growth and bio synthetic activity of fungi. In: Bilay VI (ed) Method of experimental mycology. Naukova dumka, Kiev, pp 146-147.
3. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein-dye binding. Anal Biochem 72: 248-254.
4. Desai NA, Shankar V (2003) Single-strand-specific nucleases. FEMS Microbiol Rev 26: 457-491.
5. Desai NA, Shankar V (2007) Single-strand-specific nuclease from Basidiobolus haptosporus (nuclease Bh1). Sci Res Assay 2: 139-146.
6. Frazer MJ, Low RL (1993) Fungal and mitochondrial nucleases. In: Linn SM, Lloyd RS, Roberts RJ (eds) Nucleases. Cold Spring Harbor Laboratory Press, New York, pp 171-207.
7. Fujimoto M, Kuninaka A, Yoshino H (1974) Purification of a nuclease from Penicillium citrinum. Agric Biol Chem 38: 777-783.
8. Gafurov YM (1997) The methods of DNA investigation. Dalnauka, Vladivostok.
9. Hsia KC, Li CL, Yuan HS (2005) Structural and functional insight into sugar-nonspecific nucleases in host defense. Curr Opin Struct Biol 15: 126-134.
10. Hyde KD, Wong SW, Jones EBG (1998) Diluviocola capensis gen. and sp. nov., a freshwater ascomycete with unique polar caps on the ascospores. Fungal Diversity 1: 133-146.
11. Ito J, Fukuda H (2002) ZEN1 is a key enzyme in the degradation of nuclear DNA during programmed cell death of tracheary elements. Plant Cell 14: 3201-3211.
12. Ito K, Matsuura Y, Minamura N (1994) Purification and characterization of fungal nuclease composed of heterogeneous subunits. Arch Biochem Biophys 309: 160-167.
13. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
14. Lamy B, Moutaouakil M, Latge J-P, Davies J (1991) Secretion of potential virulence factor, a fungal ribonucleotoxin, during human aspergillosis infections. Mol Microbiol 5: 1811-1815.
15. Maekawa K, Tsunasawa S, Dibo G, Sakiyama F (1991) Primary structure of nuclease P1 from Penicillium citrinum. Eur J Biochem 200: 651-661.
16. Marchetti F, Bishop JB, Lowe X, Generoso WM, Hozier J, Wyrobek AJ (2001) Etoposide induces heritable chromosomal aberrations and aneuploidy during male meiosis in the mouse. Proc Natl Acad Sci USA 9: 3952-3957.
17. Martin SA, Ullrich RS, Meyer WL (1986) A comparative study of nucleases exhibiting preference for single-stranded nucleic acid. Biochim Biophys Acta 867: 76-80.
18. Matousek J (1986) The substrate specificity of pollen extracellular nuclease. Biochem Cell Biol 64: 891-897.
19. Mavromatis K, Tsigos I, Tzanodaskalaki M, Kokkinidis M, Bouriotis V (2002) Exploring the role of a glycine cluster in cold adaptation of an alkaline phosphatase. FEBS J 269: 2330-2335.
20. Methé BA, Nelson KE, Deming JW, Momen B, Melamud E, Zhang X et al (2005) The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Proc Natl Acad Sci USA 102: 10913-10918.
21. Muramoto Y, Watanabe A, Nakamura T, Takabe T (1999) Enhanced expression of a nuclease gene in leaves of barley plants under salt stress. Gene 234: 315-321.
22. Newell SY (1996) Established and potential impacts of eukaryotic mycelial decomposers in marine/terrestrial ecotones. J Exp Mar Biol Ecol 200: 187-206.
23. Nicieza RG, Huergo J, Connolly BA, Sánchez J (1999) Purification, characterization and role of nucleases and serine proteases in Streptomyces differentiation: analogies with the biochemical processes described in late-steps of eukaryotic apoptosis. J Biol Chem 274: 20366-20375.
24. Olufsen M, Smalas AO, Moe E, Brandsdal BO (2005) Increased flexibility as a strategy for cold adaptation. J Biol Chem 280: 18042-18048.
25. Panavas T, Rubinstein B (1998) Oxidative events during programmed cell death of daylily (Hemerocallis hybrid) petals. Plant Sci 134: 1-9.
26. Pimkin M, Miller CG, Blakesley L, Oleykowski CA, Kodali NS, Yeung AT (2006) Characterization of a periplasmic S1-like nuclease coded by the Mesorhizobium loti symbiosis island. Biochem Biophys Res Commun 343: 77-84.
27. Sheryl AM, Robert C, Meyer U, William L (1986) A comparative study of nucleases exhibiting preference for single-stranded nucleic acid. Biochim Biophys Acta (BBA) - Gene Struct Expr 867: 76-80.
28. Sokal RR, Rolf RJ (1981) Biometry, 2nd edn. W. H. Freeman, New York.
29. Thelen MP, Northcote DH (1989) Identification and purification of a nuclease from Zinnia elegans L: a potential molecular marker for xylogenesis. Planta 179: 181-195.
30. Till BJ, Burtner C, Comai L, Henikoff S (2004) Mismatch cleavage by single-strand specific nucleases. Nuc Acids Res 32: 2632-2641.
31. van der Westhuizen AJ, Gliemeroth AK, Wenzel W, Hess D (1987) Isolation and partial characterization of an extracellular nuclease from pollen of Petunia hybrid. J Plant Physiol 131: 373-384.
32. Vogt V (1973) Purification and futher properties of single-strand-specific nuclease from Aspergillus oryzae. Eur J Biochem 33: 192-200.
33. Volbeda A, Lahm A, Sakiyama F, Suck D (1991) Crystal structure of Penicillium citrinum P1 nuclease at 2. 8 Å resolution. EMBO J 10: 1607-1618.