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Volumn 40, Issue 1, 2012, Pages

A cross-sample statistical model for SNP detection in short-read sequencing data

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CYTOSINE; DNA; GUANINE; THYMINE;

EID: 84855265949     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr851     Document Type: Article
Times cited : (9)

References (15)
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    • 53649106195 scopus 로고    scopus 로고
    • Next-generation DNA sequencing
    • Shendure, J. and Ji, H. (2008) Next-generation DNA sequencing. Nature Biotechnol., 26, 1135-1145.
    • (2008) Nature Biotechnol. , vol.26 , pp. 1135-1145
    • Shendure, J.1    Ji, H.2
  • 2
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li, H., Ruan, J. and Durbin, R. (2008) Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res., 18, 1851-1858.
    • (2008) Genome Res. , vol.18 , pp. 1851-1858
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 5
    • 68549098191 scopus 로고    scopus 로고
    • Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA
    • Holt, K.E., Teo, Y.Y., Li, H., Nair, S., Dougan, G., Wain, J. and Parkhill, J. (2009) Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA. Bioinformatics, 25, 2074-2075.
    • (2009) Bioinformatics , vol.25 , pp. 2074-2075
    • Holt, K.E.1    Teo, Y.Y.2    Li, H.3    Nair, S.4    Dougan, G.5    Wain, J.6    Parkhill, J.7
  • 7
    • 66449114324 scopus 로고    scopus 로고
    • SNP detection for massively parallel whole-genome resequencing
    • Li, R., Li, Y., Fang, X., Yang, H., Wang, J., Kristiansen, K. and Wang, J. (2009) SNP detection for massively parallel whole-genome resequencing. Genome Res., 19, 1124-1132.
    • (2009) Genome Res. , vol.19 , pp. 1124-1132
    • Li, R.1    Li, Y.2    Fang, X.3    Yang, H.4    Wang, J.5    Kristiansen, K.6    Wang, J.7
  • 10
    • 40049104732 scopus 로고    scopus 로고
    • SOAP: Short oligonucleotide alignment program
    • DOI 10.1093/bioinformatics/btn025
    • Li, R., Li, Y., Kristiansen, K. and Wang, J. (2008) SOAP: short oligonucleotide alignment program. Bioinformatics, 24, 713-714. (Pubitemid 351321217)
    • (2008) Bioinformatics , vol.24 , Issue.5 , pp. 713-714
    • Li, R.1    Li, Y.2    Kristiansen, K.3    Wang, J.4
  • 12
    • 2142732441 scopus 로고    scopus 로고
    • Large-Scale Simultaneous Hypothesis Testing: The Choice of a Null Hypothesis
    • Efron, B. (2004) Large-scale simultaneous hypothesis testing: the choice of a null hypothesis. J. Am. Stat. Assoc., 99, 96-104. (Pubitemid 38545197)
    • (2004) Journal of the American Statistical Association , vol.99 , Issue.465 , pp. 96-104
    • Efron, B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.