TE-dependent spatial and spectral specificity of functional connectivity

NeuroImage

Volumn 59, Issue 4, 2012, Pages 3075-3084

  Wu, Changwei W ^a,b   Gu, Hong ^a   Zou, Qihong ^c   Lu, Hanbing ^a   Stein, Elliot A ^a   Yang, Yihong ^a  

^a NATIONAL INSTITUTE ON DRUG ABUSE   (United States)

^b NATIONAL CENTRAL UNIVERSITY   (Taiwan)

^c PEKING UNIVERSITY   (China)

Author keywords

Echo time; FMRI; Frequency; Functional connectivity; Spontaneous fluctuations

Indexed keywords

ADULT; ALGORITHM; ARTICLE; ATTENTION; CALCULATION; CONTROLLED STUDY; FEMALE; FUNCTIONAL ASSESSMENT; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; HUMAN EXPERIMENT; MALE; MOTOR SYSTEM; NORMAL HUMAN; PRIORITY JOURNAL; SENSORIMOTOR FUNCTION; VISUAL SYSTEM;

BRAIN; FEMALE; HUMANS; MAGNETIC RESONANCE IMAGING; MALE; PHYSIOLOGICAL PROCESSES; SENSITIVITY AND SPECIFICITY; YOUNG ADULT;

EID: 84855173301     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2011.11.030     Document Type: Article

References (56)

1. Anand A., Li Y., Wang Y., Wu J., Gao S., Bukhari L., Mathews V.P., Kalnin A., Lowe M.J. Activity and connectivity of brain mood regulating circuit in depression: a functional magnetic resonance study. Biol. Psychiatry 2005, 57:1079-1088.
2. Beall E.B., Lowe M.J. Isolating physiologic noise sources with independently determined spatial measures. NeuroImage 2007, 37:1286-1300.
3. Bianciardi M., Fukunaga M., van Gelderen P., Horovitz S.G., de Zwart J.A., Shmueli K., Duyn J.H. Sources of functional magnetic resonance imaging signal fluctuations in the human brain at rest: a 7T study. Magn. Reson. Imaging 2009, 27:1019-1029.
4. Birn R.M., Diamond J.B., Smith M.A., Bandettini P.A. Separating respiratory-variation-related fluctuations from neuronal-activity-related fluctuations in fMRI. NeuroImage 2006, 31:1536-1548.
5. Birn R.M., Smith M.A., Jones T.B., Bandettini P.A. The respiration response function: the temporal dynamics of fMRI signal fluctuations related to changes in respiration. NeuroImage 2008, 40:644-654.
6. Biswal B., Yetkin F.Z., Haughton V.M., Hyde J.S. Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn. Reson. Med. 1995, 34:537-541.
7. Bluhm R.L., Miller J., Lanius R.A., Osuch E.A., Boksman K., Neufeld R.W., Théberge J., Schaefer B., Williamson P. Spontaneous low-frequency fluctuations in the BOLD signal in schizophrenic patients: anomalies in the default network. Schizophr. Bull. 2007, 33:1004-1012.
8. Buckner R.L., Andrews-Hanna J.R., Schacter D.L. The brain's default network: anatomy, function, and relevance to disease. Ann. N. Y. Acad. Sci. 2008, 1124:1-38.
9. Buzsáki G., Draguhn A. Neuronal oscillations in cortical networks. Science 2004, 304:1926-1929.
10. Chang C., Glover G.H. Time-frequency dynamics of resting-state brain connectivity measured with fMRI. NeuroImage 2010, 50:81-98.
11. Cherkassky V.L., Kana R.K., Keller T.A., Just M.A. Functional connectivity in a baseline resting-state network in autism. Neuroreport 2006, 17:1687-1690.
12. Cordes D., Haughton V.M., Arfanakis K., Carew J.D., Turski P.A., Moritz C.H., Quigley M.A., Meyerand M.E. Frequencies contributing to functional connectivity in the cerebral cortex in "resting-state" data. Am. J. Neuroradiol. 2001, 22(7):1326-1333.
13. Cox R.W. AFNI: software for analysis and visualization of functional magnetic resonance neuroimages. Comput. Biomed. Res. 1996, 29:162-173.
14. Fox M.D., Snyder A.Z., Vincent J.L., Raichle M.E. Intrinsic fluctuations within cortical systems account for intertrial variability in human behavior. Neuron 2007, 56:171-184.
15. Gao J.H., Miller I., Lai S., Xiong J., Fox P.T. Quantitative assessment of blood inflow effects in functional MRI signals. Magn. Reson. Med. 1996, 36:314-319.
16. Glover G.H., Li T.Q., Ress D. Image-based method for retrospective correction of physiological motion effects in fMRI: RETROICOR. Magn. Reson. Med. 2000, 44:162-167.
17. Gu H., Salmeron B.J., Ross T.J., Geng X., Zhan W., Stein E.A., Yang Y. Mesocorticolimbic circuits are impaired in chronic cocaine users as demonstrated by resting-state functional connectivity. NeuroImage 2010, 53:593-601.
18. Hong L.E., Gu H., Yang Y., Ross T.J., Salmeron B.J., Buchholz B., Thaker G.K., Stein E.A. Association of nicotine addiction and nicotine's actions with separate cingulate cortex functional circuits. Arch. Gen. Psychiatry 2009, 66:431-441.
19. Hulvershorn J., Bloy L., Gualtieri E.E., Redmann C.P., Leigh J.S., Elliott M.A. Temporal resolving power of spin echo and gradient echo fMRI at 3T with apparent diffusion coefficient compartmentalization. Hum. Brain Mapp. 2005, 25:247-258.
20. Hyde J.S., Biswal B.B., Jesmanowicz A. High-resolution fMRI using multislice partial k-space GR-EPI with cubic voxels. Magn. Reson. Med. 2001, 46:114-125.
21. Krüger G., Glover G.H. Physiological noise in oxygenation-sensitive magnetic resonance imaging. Magn. Reson. Med. 2001, 46:631-637.
22. Laufs H., Krakow K., Sterzer P., Eger E., Beyerle A., Salek-Haddadi A., Kleinschmidt A. Electroencephalographic signatures of attentional and cognitive default modes in spontaneous brain activity fluctuations at rest. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:11053-11058.
23. Le Bihan D. The 'wet mind': water and functional neuroimaging. Phys. Med. Biol. 2007, 52:R57-R90.
24. Leopold D.A., Murayama Y., Logothetis N.K. Very slow activity fluctuations in monkey visual cortex: implications for functional brain imaging. Cereb. Cortex 2003, 13:422-433.
25. Li S.J., Li Z., Wu G., Zhang M.J., Franczak M., Antuono P.G. Alzheimer disease: evaluation of a functional MR imaging index as a marker. Radiology 2002, 225:253-259.
26. Linkenkaer-Hansen K., Nikouline V.V., Palva J.M., Ilmoniemi R.J. Long-range temporal correlations and scaling behavior in human brain oscillations. J. Neurosci. 2001, 21:1370-1377.
27. Lowe M.J., Phillips M.D., Lurito J.T., Mattson D., Dzemidzic M., Mathews V.P. Multiple sclerosis: low-frequency temporal blood oxygen level-dependent fluctuations indicate reduced functional connectivity initial results. Radiology 2002, 224:184-192.
28. Lu H., Zuo Y., Gu H., Waltz J.A., Zhan W., Scholl C.A., Rea W., Yang Y., Stein E.A. Synchronized delta oscillations correlate with the resting-state functional MRI signal. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:18265-18269.
29. Mantini D., Perrucci M.G., Del Gratta C., Romani G.L., Corbetta M. Electrophysiological signatures of resting state networks in the human brain. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:13170-13175.
30. Massimini M., Ferrarelli F., Huber R., Esser S.K., Singh H., Tononi G. Breakdown of cortical effective connectivity during sleep. Science 2005, 309:2228-2232.
31. Menon R.S., Ogawa S., Tank D.W., Uǧurbil K. Tesla gradient recalled echo characteristics of photic stimulation-induced signal changes in the human primary visual cortex. Magn. Reson. Med. 1993, 30:380-386.
32. Ogawa S., Tank D.W., Menon R., Ellermann J.M., Kim S.G., Merkle H., Ugurbil K. Intrinsic signal changes accompanying sensory stimulation: functional brain mapping with magnetic resonance imaging. Proc. Natl. Acad. Sci. U. S. A. 1992, 89:5951-5955.
33. *) dependence of low frequency functional connectivity. NeuroImage 2002, 16:985-992.
34. Raichle M.E., MacLeod A.M., Snyder A.Z., Powers W.J., Gusnard D.A., Shulman G.L. A default mode of brain function. Proc. Natl. Acad. Sci. U. S. A. 2001, 98:676-682.
35. Roosendaal S.D., Hulst H.E., Vrenken H., Feenstra H.E., Castelijns J.A., Pouwels P.J., Barkhof F., Geurts J.J. Structural and functional hippocampal changes in multiple sclerosis patients with intact memory function. Radiology 2010, 255:595-604.
36. Salvador R., Martínez A., Pomarol-Clotet E., Gomar J., Vila F., Sarró S., Capdevila A., Bullmore E. A simple view of the brain through a frequency-specific functional connectivity measure. NeuroImage 2008, 39:279-289.
37. Sasai S., Homae F., Watanabe H., Taga G. Frequency-specific functional connectivity in the brain during resting state revealed by NIRS. NeuroImage 2011, 56:252-257.
38. Schölvinck M.L., Maier A., Ye F.Q., Duyn J.H., Leopold D.A. Neural basis of global resting-state fMRI activity. Proc. Natl. Acad. Sci. U. S. A. 2010, 107:10238-10243.
39. Shmuel A., Leopold D.A. Neuronal correlates of spontaneous fluctuations in fMRI signals in monkey visual cortex: implications for functional connectivity at rest. Hum. Brain Mapp. 2008, 29:751-761.
40. Shmueli K., van Gelderen P., de Zwart J.A., Horovitz S.G., Fukunaga M., Jansma J.M., Duyn J.H. Low-frequency fluctuations in the cardiac rate as a source of variance in the resting-state fMRI BOLD signal. NeuroImage 2007, 38:306-320.
41. * on oxygen saturation at 1.5 and 4.7Tesla. Magn. Reson. Med. 2003, 49:47-60.
42. Van Dijk K.R., Hedden T., Venkataraman A., Evans K.C., Lazar S.W., Buckner R.L. Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization. J. Neurophysiol. 2010, 103:297-321.
43. Varela F., Lachaux J.P., Rodriguez E., Martinerie J. The brainweb: phase synchronization and large-scale integration. Nat. Rev. Neurosci. 2001, 2:229-239.
44. Vincent J.L., Patel G.H., Fox M.D., Snyder A.Z., Baker J.T., Van Essen D.C., Zempel J.M., Snyder L.H., Corbetta M., Raichle M.E. Intrinsic functional architecture in the anaesthetized monkey brain. Nature 2007, 447:83-86.
45. Wu G., Li S.J. Theoretical noise model for oxygenation-sensitive magnetic resonance imaging. Magn. Reson. Med. 2005, 53:1046-1054.
46. Wu C.W., Gu H., Lu H., Stein E.A., Chen J.H., Yang Y. Frequency specificity of functional connectivity in brain networks. NeuroImage 2008, 42:1047-1055.
47. Yan L., Zhuo Y., Ye Y., Xie S.X., An J., Aguirre G.K., Wang J. Physiological origin of low-frequency drift in blood oxygen level dependent (BOLD) functional magnetic resonance imaging (fMRI). Magn. Reson. Med. 2009, 61:819-827.
48. Yang Y., Glover G.H., van Gelderen P., Patel A.C., Mattay V.S., Frank J.A., Duyn J.H. A comparison of fast MR scan techniques for cerebral activation studies at 1.5Tesla. Magn. Reson. Med. 1998, 39:61-67.
49. Yang H., Long X.Y., Yang Y., Yan H., Zhu C.Z., Zhou X.P., Zang Y.F., Gong Q.Y. Amplitude of low frequency fluctuation within visual areas revealed by resting-state functional MRI. NeuroImage 2007, 36:144-152.
50. Zang Y., Jiang T., Lu Y., He Y., Tian L. Regional homogeneity approach to fMRI data analysis. NeuroImage 2004, 22:394-400.
51. Zarahn E., Aguirre G.K., D'Esposito M. Empirical analyses of BOLD fMRI statistics. I. Spatially unsmoothed data collected under null-hypothesis conditions. NeuroImage 1997, 5:179-197.
52. Zhang D., Raichle M.E. Disease and the brain's dark energy. Nat. Rev. Neurol. 2010, 6:15-28.
53. Zhao X., Bodurka J., Jesmanowicz A., Li S.J. B(0)-fluctuation-induced temporal variation in EPI image series due to the disturbance of steady-state free precession. Magn. Reson. Med. 2000, 44:758-765.
54. Zhou J., Greicius M.D., Gennatas E.D., Growdon M.E., Jang J.Y., Rabinovici G.D., Kramer J.H., Weiner M., Miller B.L., Seeley W.W. Divergent network connectivity changes in behavioural variant frontotemporal dementia and Alzheimer's disease. Brain 2010, 133:1352-1367.
55. Zou Q.H., Zhu C.Z., Yang Y., Zuo X.N., Long X.Y., Cao Q.J., Wang Y.F., Zang Y.F. An improved approach to detection of amplitude of low-frequency fluctuation (ALFF) for resting-state fMRI: fractional ALFF. J. Neurosci. Methods 2008, 172:137-141.
56. Zuo X.N., Di Martino A., Kelly C., Shehzad Z.E., Gee D.G., Klein D.F., Castellanos F.X., Biswal B.B., Milham M.P. The oscillating brain: complex and reliable. NeuroImage 2010, 49:1432-1445.