Mr-Tandem: Parallel x!Tandem using Hadoop MapReduce on Amazon web services

Bioinformatics

Volumn 28, Issue 1, 2012, Pages 136-137

  Pratt, Brian ^a   Howbert, J Jeffry ^a   Tasman, Natalie I ^a   Nilsson, Erik J ^a  

^a Insilicos LLC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ARTICLE; CLUSTER ANALYSIS; COMPUTER LANGUAGE; COMPUTER PROGRAM; ECONOMICS; METABOLISM; PROTEIN PROCESSING; SEARCH ENGINE;

CLUSTER ANALYSIS; PROGRAMMING LANGUAGES; PROTEIN PROCESSING, POST-TRANSLATIONAL; PROTEINS; SEARCH ENGINE; SOFTWARE;

EID: 84855166719     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr615     Document Type: Article

References (3)

1. Craig, R. and Beavis, R.C. (2004) TANDEM: matching proteins with mass spectra. Bioinformatics, 20, 1466-1467.
2. Bjornson, R.D. et al. (2008) X!!Tandem, an improved method for running X!Tandem on Collections of Commodity Computers. J. Proteome Res., 7, 293-299.
3. Duncan, D.T. et al. (2005) Parallel Tandem: a program for parallel processing of tandem mass spectra using PVM or MPI and X!Tandem. J. Proteome Res., 4, 1842-1847.