Symmetry distortion in the human hemoglobin tetramer induced by asymmetric ligation

FEBS Letters

Volumn 586, Issue 1, 2012, Pages 74-78

  Shibayama, Naoya ^a  

^a JICHI MEDICAL UNIVERSITY   (Japan)

Author keywords

4,4 Dithiodipyridine; Allosteric model; Allostery; Hemoglobin; Symmetry

Indexed keywords

4,4' DITHIODIPYRIDINE; HEMOGLOBIN; TETRAMER; THIOL DERIVATIVE;

ADULT; ANALYTIC METHOD; ARTICLE; CHEMICAL REACTION KINETICS; CONFORMATIONAL TRANSITION; HUMAN; LIGAND BINDING; PRIORITY JOURNAL; PROTEIN CROSS LINKING;

CROSS-LINKING REAGENTS; DISULFIDES; HEMOGLOBINS; HUMANS; IRON; NICKEL; PROTEIN CONFORMATION; PYRIDINES;

EID: 84655163947     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2011.11.027     Document Type: Article

References (35)

1. M.F. Perutz Mechanisms of cooperativity and allosteric regulation in proteins Q. Rev. Biophys. 22 1989 139 237
2. J. Monod, J. Wyman, and J.-P. Changeux On the nature of allosteric transitions: a plausible model J. Mol. Biol. 12 1965 88 118
3. M.F. Perutz, M.G. Rossmann, A.F. Cullis, H. Muirhead, G. Will, and A.C.T. Norrth Structure of haemoglobin: a three-dimensional Fourier synthesis at 5.5- resolution, obtained by X-ray analysis Nature 185 1969 416 422
4. J.M. Baldwin The structure of human carbonmonoxy haemoglobin at 2.7 resolution J. Mol. Biol. 136 1980 103 128 (Pubitemid 10136649)
5. B. Shaanan Structure of human oxyhaemoglobin at 2.1 resolution J. Mol. Biol. 171 1983 31 59 (Pubitemid 14238654)
6. G. Fermi, M.F. Perutz, B. Shaanan, and R. Fourme The crystal structure of human deoxyhaemoglobin at 1.74 resolution J. Mol. Biol. 175 1984 159 174 (Pubitemid 15243353)
7. G.K. Ackers, P.M. Dalessio, G.H. Lew, M.A. Daugherty, and J.M. Holt Single residue modification of only one dimer within the hemoglobin tetramer reveals autonomous dimer function Proc. Natl. Acad. Sci. USA 99 2002 9777 9782 (Pubitemid 34831124)
8. G.K. Ackers, and J.M. Holt Asymmetric cooperativity in a symmetric tetramer: human hemoglobin J. Biol. Chem. 281 2006 11441 11443 (Pubitemid 43855396)
9. +CN-)(αβ): no preferentially populating asymmetric hybrid at equilibrium Biochemistry 36 1997 4375 4381 (Pubitemid 27180282)
10. +CN-)(αβ): the issue of valency exchange Biochemistry 37 1998 6221 6228 (Pubitemid 28213638)
11. N. Shibayama, K. Imai, H. Hirata, H. Hiraiwa, H. Morimoto, and S. Saigo Oxygen equilibrium properties of highly purified human adult hemoglobin cross-linked between 82β1 and 82β2 lysyl residues by bis(3,5-dibromosalicyl)fumarate Biochemistry 30 1991 8158 8165
12. J.A. Walder, R.H. Zaugg, R.Y. Walder, J.M. Steele, and I.M. Klotz Diaspirins that cross-link beta chains of hemoglobin: bis(3,5-dibromosalicyl) succinate and bis(3,5-dibromosalicyl)fumarate Biochemistry 18 1979 4265 4270 (Pubitemid 10247831)
13. N. Shibayama, H. Morimoto, and G. Miyazaki Oxygen equilibrium study and light absorption spectra of Ni(II)-Fe(II) hybrid hemoglobins J. Mol. Biol. 192 1986 323 329 (Pubitemid 17203059)
14. N. Shibayama, H. Morimoto, and T. Kitagawa Properties of chemically modified Ni(II)-Fe(II) hybrid hemoglobins: Ni(II) protoprphyrin IX as a model for a permanent deoxy-heme J. Mol. Biol. 192 1986 331 336 (Pubitemid 17203060)
15. N. Shibayama, K. Imai, H. Morimoto, and S. Saigo Oxygen equilibrium properties of nickel(II)-iron(II) hybrid hemoglobins cross-linked between 82β1 and 82β2 lysyl residues by bis(3,5-dibromosalicyl)fumarate: determination of the first two-step microscopic Adair constants for human hemoglobin Biochemistry 34 1995 4773 4780
16. N. Shibayama, K. Imai, H. Morimoto, and S. Saigo Oxygen equilibrium properties of asymmetric nickel(II)-iron(II) hybrid hemoglobin Biochemistry 32 1993 8792 8798 (Pubitemid 23268801)
17. J.V. Kilmartin, J.A. Hewitt, and J.F. Wootton Alteration of functional properties associated with the change in quaternary structure in unliganded haemoglobin J. Mol. Biol. 93 1975 203 218
18. S.-Y. Park, N. Shibayama, T. Hiraki, and J.R. Tame Crystal structures of unlignaded and half-liganded human hemoglobin derivatives cross-linked between Lys82β1 and Lys82β2 Biochemistry 43 2004 8711 8717 (Pubitemid 38880041)
19. A. Riggs The binding of N-ethylmaleimide by human hemoglobin and its effect upon the oxygen equilibrium J. Biol. Chem. 236 1961 1948 1954
20. R.E. Benesch, and R. Benesch The influence of oxygenation on the reactivity of the -SH groups of hemoglobin Biochemistry 1 1962 735 738
21. G. Guidotti The rate of reaction of the sulfhydryl groups of human hemoglobin J. Biol. Chem. 240 1965 3924 3927
22. N. Makino, and Y. Sugita The structure of partially oxygenated hemoglobin: a highly reactive intermediate toward a sulfhydryl titrant J. Biol. Chem. 257 1982 163 168 (Pubitemid 12109767)
23. K. Imai Allostric Effects in Haemoglobin 1982 Cambridge University Press Cambridge
24. M. Perrella, and E. Di Cera CO ligation intermediates and the mechanism of hemoglobin cooperativity J. Biol. Chem. 274 1999 2605 2608 (Pubitemid 29075335)
25. N. Shibayama Functional analysis of hemoglobin molecules locked in doubly liganded conformations J. Mol. Biol. 285 1999 1383 1388 (Pubitemid 29060442)
26. C.A. Sawicki, and Q.H. Gibson Quaternary conformational change in human hemoglobin studied by laser photolysis of carboxyhemoglobin J. Biol. Chem. 251 1976 1533 1542
27. N. Shibayama, T. Inubushi, H. Morimoto, and T. Yonetani Proton nuclear magnetic resonance and spectrophotometric studies of nickel(II)-iron(II) hybrid hemoglobins Biochemstry 26 1987 2194 2201 (Pubitemid 17080964)
28. A. Hayashi, T. Suzuki, K. Imai, H. Morimoto, and H. Watari Properties of hemoglobin M, Milwaukee-1 variant and its unique characteristic. Biochim Biophys. Acta 194 1969 6 15
29. Q.H. Gibson p-Mercuribenzoate as an indicator of conformational change in hemoglobin J. Biol. Chem. 248 1973 1281 1284
30. R. Cassoly, and Q.H. Gibson The kinetics of ligand binding to hemoglobin valency hybrids and the effect of anions J. Biol. Chem. 247 1972 7332 7341
31. J.S. Philo, U. Dreyer, and J.W. Lary Quaternary structure dynamics and carbon monoxide binding kinetics of hemoglobin valency hybrids Biophys. J. 70 1996 1949 1965 (Pubitemid 26103967)
32. 2 and CO binding to the α and β subunits within the R and T states of human hemoglobin J. Biol. Chem. 273 1998 23150 23159 (Pubitemid 28417498)
33. M.L. Doyle, and G.K. Ackers Cooperative oxygen binding, subunit assembly, and sulfhydryl reaction kinetics of the eight cyanomet intermediate ligation states of human hemoglobin Biochemistry 31 1992 11182 11195
34. M.A. Daugherty, M.A. Shea, J.A. Johnson, V.J. LiCata, G.J. Turner, and G.K. Ackers Identification of the intermediate allosteric species in human hemoglobin reveals a molecular code for cooperative switching Proc. Natl. Acad. Sci. USA 88 1991 1110 1114 (Pubitemid 21916174)
35. G.K. Ackers, M.L. Doyle, D. Myers, and M.A. Daugherty Molecular code for cooperativity in hemoglobin Science 255 1992 54 63