Proteomic analysis of dystrophic muscle

Methods in Molecular Biology

Volumn 798, Issue , 2012, Pages 357-369

  Lewis, Caroline ^a   Doran, Philip ^a   Ohlendieck, Kay ^a  

^a NATIONAL UNIVERSITY OF IRELAND   (Ireland)

Author keywords

Difference in gel electrophoresis; Duchenne muscular dystrophy; Mass spectrometry; MDX; Proteomics; Two dimensional gel electrophoresis

Indexed keywords

FLUORESCENT DYE; PROTEIN;

ANIMAL; ARTICLE; DUCHENNE MUSCULAR DYSTROPHY; ISOELECTRIC FOCUSING; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MOUSE; PATHOLOGY; PROTEOMICS; SKELETAL MUSCLE; STAINING; TWO DIMENSIONAL GEL ELECTROPHORESIS; X CHROMOSOME LINKED MUSCULAR DYSTROPHIC MOUSE;

ANIMALS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; FLUORESCENT DYES; ISOELECTRIC FOCUSING; MASS SPECTROMETRY; MICE; MICE, INBRED MDX; MUSCLE, SKELETAL; MUSCULAR DYSTROPHY, DUCHENNE; PROTEINS; PROTEOMICS; STAINING AND LABELING;

EID: 84555191575     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-343-1_20     Document Type: Article

References (29)

1. Isfort RJ (2002) Proteomic analysis of striated muscle. J Chromatogr B 771:155-165 (Pubitemid 34457726)
2. Doran P, Gannon J, O'Connell K, Ohlendieck K. (2007) Proteomic profiling of aged and pathological skeletal muscle (review). Int J Mol Med 19:547-564
3. Doran P, O'Connell K, Gannon J, Ohlendieck K. (2007) Proteomic profiling of animal models mimicking skeletal muscle disorders. Proteomics Clin Appl 1:1169-1184
4. Ohlendieck K (2010) Proteomics of skeletal muscle differentiation, neuromuscular disorders and aging. Expert Rev Proteomics 7:283-296
5. Monaco AP, Neve RL, Colletti-Feener C, Bertelson CJ, Kurnit DM, Kunkel LM (1986) Isolation of candidate cDNAs for portions of the Duchenne muscular dystrophy gene. Nature 323:646-650 (Pubitemid 16008561)
6. Campbell KP (1995) Three muscular dystrophies: loss of cytoskeleton-extracellular matrix linkage. Cell 80:675-679
7. Ohlendieck K (1996) Towards an understanding of the dystrophin- glycoprotein complex: linkage between the extracellular matrix and the subsarcolemmal membrane cytoskeleton. Eur J Cell Biol 69:1-10 (Pubitemid 26033923)
8. Ervasti JM, Sonnemann KJ (2008) Biology of the striated muscle dystrophin-glycoprotein complex. Int Rev Cytol 265:191-225 (Pubitemid 351215989)
9. Clerk A, Sewry CA, Dubowitz V, Strong, PN (1992) Characterisation of dystrophin in fetuses at risk for Duchenne muscular dystrophy. J Neurol Sci 111:82-91
10. Wessels A, Ginjaar IB, Moorman AF, van Ommen GJ (1991) Different localization of dystrophin in developing and adult human skeletal muscle. Muscle Nerve 14:1-7
11. Clerk A, Strong PN, Sewry CA (1992) Characterisation of dystrophin during development of human skeletal muscle. Development 114:395-402
12. Merrick D, Stadler LK, Larner D, Smith J (2009) Muscular dystrophy begins early in embryonic development deriving from stem cell loss and disrupted skeletal muscle formation. Dis Model Mech 2:374-388
13. Ohlendieck K, Campbell KP (1991) Dystrophinassociated proteins are greatly reduced in skeletal muscle from mdx mice. J Cell Biol 115:1685-1694 (Pubitemid 21910008)
14. Ohlendieck K, Matsumura K, Ionasescu VV, Towbin JA, Bosch P, Weinstein SL, Sernett SW, Campbell KP (1993) Duchenne muscular dystrophy: deficiency of dystrophin-associated proteins in the sarcolemma. Neurology 43:795-800 (Pubitemid 23121977)
15. Krueger J, Kunert-Keil C, Bisping F, Brinkmeier H (2008) Transient receptor potential cation channels in normal and dystrophic mdx muscle. Neuromuscul Disord 18:501-513
16. Mallouk N, Jacquemond V, Allard B (2000) Elevated subsarcolemmal Ca2+ in mdx mouse skeletal muscle fibres detected with Ca2+- activated K+ channels. Proc Natl Acad Sci USA 97:4950-4955 (Pubitemid 30238663)
17. Ge Y, Molloy MP, Chamberlain JS, Andrews PC (2003) Proteomic analysis of mdx skeletal muscle: Great reduction of adenylate kinase 1 expression and enzymatic activity. Proteomics 3:1895-1903 (Pubitemid 37305883)
18. Doran P, Dowling P, Lohan J, McDonnell K, Poetsch S, Ohlendieck K (2004) Subproteomics analysis of Ca2+-binding proteins demonstrates decreased calsequestrin expression in dystrophic mouse skeletal muscle. Eur J Biochem 271:3943-3952 (Pubitemid 39331443)
19. Doran P, Dowling P, Donoghue P, Buffini M, Ohlendieck K (2006) Reduced expression of regucalcin in young and aged mdx diaphragm indicates abnormal cytosolic calcium handling in dystrophin-deficient muscle. Biochim Biophys Acta 1764:773-785
20. Doran P, Martin G, Dowling P, Jockusch H, Ohlendieck K (2006) Proteome analysis of the dystrophin-deficient MDX diaphragm reveals a drastic increase in the heat shock protein cvHSP. Proteomics 6:4610-4621 (Pubitemid 44336975)
21. Lewis C, Carberry S, Ohlendieck, K (2009) Proteomic profiling of x-linked muscular dystrophy. J Muscle Res Cell Motil 30:267-279.
22. Carrette O, Burkhard PR, Sanchez JC, Hochstrasser DF (2006) State-of-the-art two-dimensional gel electrophoresis: a key tool of proteomics research. Nast Protoc 1:812-823
23. Weiss W, Gorg A (2009) High-resolution twodimensional electrophoresis. Methods Mol Biol 564:13-32
24. Friedman DB, Hoving S, Westermeier R (2009) Isoelectric focusing and two-dimensional gel electrophoresis. Methods Enzymol 463: 515-540
25. Viswanathan S, Unlu M, Minden JS (2006) Two-dimensional difference gel electrophoresis. Nat Protoc 1:1351-1358
26. Minden JS, Dowd SR, Meyer HE, Stuehler K (2009) Difference gel electrophoresis. Electrophoresis 30:S156-S161
27. Marouga R, David S, Hawkins E (2005) The development of the DIGE system: 2D fluorescence difference gel analysis technology. Anal Bioanal Chem 382:669-678 (Pubitemid 40890994)
28. Timms JF, Cramer R (2008) Difference gel electrophoresis. Proteomics 8:4886-4897
29. Sapra R (2009) The use of difference in-gel electrophoresis for quantitation of protein expression. Methods Mol Biol 492:93-112