-
1
-
-
75549090213
-
KEGG for representation and analysis of molecular networks involving diseases and drugs
-
Kanehisa M, Goto S, Furumichi M et al (2010) KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res 38:D355-360.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Kanehisa, M.1
Goto, S.2
Furumichi, M.3
-
2
-
-
84860888281
-
-
KEGG Home Page. http://www.kegg.jp/.
-
-
-
-
3
-
-
84860888282
-
-
GenomeNet. http://www.genome.jp/.
-
-
-
-
4
-
-
84555160731
-
KEGG and DBGET/LinkDB: Integration of biological relationships in divergent molecular biology data
-
Technical Report WS-98-04, AAAI Press
-
Fujibuchi W, Sato K, Ogata H et al (1998) KEGG and DBGET/LinkDB: Integration of biological relationships in divergent molecular biology data. In: Knowledge Sharing Across Biological and Medical Knowledge Based Systems. Technical Report WS-98-04, pp 35-40, AAAI Press.
-
(1998)
Knowledge Sharing Across Biological and Medical Knowledge Based Systems
, pp. 35-40
-
-
Fujibuchi, W.1
Sato, K.2
Ogata, H.3
-
5
-
-
0036081122
-
LIGAND: Database of chemical compounds and reactions in biological pathways
-
Goto S, Okuno Y, Hattori M et al (2002) LIGAND: database of chemical compounds and reactions in biological pathways. Nucleic Acids Res 30:402-404. (Pubitemid 34679597)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.1
, pp. 402-404
-
-
Goto, S.1
Okuno, Y.2
Hattori, M.3
Nishioka, T.4
Kanehisa, M.5
-
6
-
-
84860889664
-
-
KEGGPATHWAY. http://www.kegg.jp/kegg/pathway.html.
-
-
-
-
7
-
-
84860889427
-
-
KEGGMarkup Language. http://www.genome.jp/kegg/xml/.
-
-
-
-
8
-
-
48449090785
-
KEGG Atlas mapping for global analysis of metabolic pathways
-
Okuda S, Yamada T, HamajimaMet al (2008) KEGG Atlas mapping for global analysis of metabolic pathways. Nucleic Acids Res 36: W423-426.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Okuda, S.1
Al Hamajimamet, Y.T.2
-
9
-
-
84860889440
-
-
KEGG BRITE. http://www.genome.jp/kegg/brite.html.
-
-
-
-
10
-
-
84860889693
-
-
PATHWAY color Page. http://www.genome.jp/kegg/tool/color-pathway.html.
-
-
-
-
11
-
-
84860889692
-
-
BRITE color Page. http://www.genome.jp/kegg/tool/color-brite.html.
-
-
-
-
12
-
-
84860882150
-
-
KEGG API. http://www.genome.jp/kegg/soap/.
-
-
-
-
13
-
-
84860881975
-
-
KegTools Page. http://www.genome.jp/kegg/download/kegtools.html.
-
-
-
-
14
-
-
84860882149
-
-
KEGG EXPRESSION database. http://www.genome.jp/kegg/expression/.
-
-
-
-
15
-
-
84860889691
-
-
KEGG DISEASE. http://www.genome.jp/kegg/disease/.
-
-
-
-
16
-
-
84860889448
-
-
KEGGDRUG. http://www.genome.jp/kegg/drug/.
-
-
-
-
17
-
-
66149139737
-
Extraction and analysis of chemical modification patterns in drug development
-
Shigemizu D, Araki M, Okuda S et al (2009) Extraction and analysis of chemical modification patterns in drug development. J Chem Inf Model 49:1122-1129.
-
(2009)
J Chem Inf Model
, vol.49
, pp. 1122-1129
-
-
Shigemizu, D.1
Araki, M.2
Okuda, S.3
-
18
-
-
84860889447
-
-
EDRUG database. http://www.genome.jp/kegg/drug/edrug.html.
-
-
-
-
19
-
-
34250673602
-
EGENES: Transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG
-
DOI 10.1104/pp.106.095059
-
Masoudi-Nejad A, Goto S, Jauregui R et al (2007) EGENES: transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG. Plant Physiol 144:857-866. (Pubitemid 46944749)
-
(2007)
Plant Physiology
, vol.144
, Issue.2
, pp. 857-866
-
-
Masoudi-Nejad, A.1
Goto, S.2
Jauregui, R.3
Ito, M.4
Kawashima, S.5
Moriya, Y.6
Endo, T.R.7
Kanehisa, M.8
-
20
-
-
65949121177
-
Systems biology approaches and pathway tools for investigating cardiovascular disease
-
Wheelock CE, Wheelock AM, Kawashima S et al (2009) Systems biology approaches and pathway tools for investigating cardiovascular disease. Mol Biosyst 5:588-602.
-
(2009)
Mol Biosyst
, vol.5
, pp. 588-602
-
-
Wheelock, C.E.1
Wheelock, A.M.2
Kawashima, S.3
-
21
-
-
74049142808
-
Bioinformatics strategies for the analysis of lipids
-
Wheelock CE, Goto S, Yetukuri L et al (2009) Bioinformatics strategies for the analysis of lipids. Methods Mol Biol 580:339-368.
-
(2009)
Methods Mol Biol
, vol.580
, pp. 339-368
-
-
Wheelock, C.E.1
Goto, S.2
Yetukuri, L.3
-
22
-
-
84860889449
-
-
KEGGGENES. http://www.genome.jp/kegg/genes.html.
-
-
-
-
23
-
-
84860882152
-
-
KEGG Organism Page. http://www.genome.jp/kegg/catalog/org-list.html.
-
-
-
-
24
-
-
84860881976
-
-
KEGG GENOME Page. http://www.genome.jp/kegg/genome.html.
-
-
-
-
25
-
-
34547588704
-
KAAS: An automatic genome annotation and pathway reconstruction server
-
Moriya Y, Itoh M, Okuda S et al (2007) KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Res 35:W182-185.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Moriya, Y.1
Itoh, M.2
Okuda, S.3
-
26
-
-
84860882153
-
-
KAASPage. http://www.genome.jp/tools/kaas/.
-
-
-
-
27
-
-
84860881978
-
-
DBGET Page. http://www.genome.jp/dbget/.
-
-
-
-
28
-
-
84860881977
-
-
KEGG Identifier Page. http://www.genome.jp/kegg/kegg3.html.
-
-
-
-
29
-
-
77954268488
-
PathPred: An enzyme-catalyzed metabolic pathway prediction server
-
Moriya Y, Shigemizu D, Hattori M et al (2010) PathPred: an enzyme-catalyzed metabolic pathway prediction server. Nucleic Acids Res 38:W138-143.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Moriya, Y.1
Shigemizu, D.2
Hattori, M.3
-
30
-
-
11444249446
-
Computational assignment of the EC numbers for genomic-scale analysis of enzymatic reactions
-
DOI 10.1021/ja0466457
-
Kotera M, Okuno Y, Hattori M et al (2004) Computational assignment of the EC numbers for genomic-scale analysis of enzymatic reactions. J AmChem Soc 126:16487-16498. (Pubitemid 40081948)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.50
, pp. 16487-16498
-
-
Kotera, M.1
Okuno, Y.2
Hattori, M.3
Goto, S.4
Kanehisa, M.5
-
31
-
-
66349127228
-
E-zyme: Predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs
-
Yamanishi Y, Hattori M, Kotera M et al (2009) E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs. Bioinformatics 25: i179-186.
-
(2009)
Bioinformatics
, vol.25
-
-
Yamanishi, Y.1
Hattori, M.2
Kotera, M.3
-
32
-
-
84555185979
-
KEGG GLYCAN for integrated analysis of pathways, genes, and structures
-
Taniguchi N, Suzuki A, Ito Y, Narimatsu H, Kawasaki T, Hase S (eds.) Springer
-
Hashimoto K, Kanehisa M (2008) KEGG GLYCAN for integrated analysis of pathways, genes, and structures. In: Taniguchi N, Suzuki A, Ito Y, Narimatsu H, Kawasaki T, Hase S (eds.) Experimental Glycoscience. pp 441-444, Springer.
-
(2008)
Experimental Glycoscience.
, pp. 441-444
-
-
Hashimoto, K.1
Kanehisa, M.2
-
33
-
-
0141843591
-
Development of a chemical structure comparison method for integrated analysis of chemical and genomic information in the metabolic pathways
-
DOI 10.1021/ja036030u
-
Hattori M, Okuno Y, Goto S et al (2003) Development of a chemical structure comparison method for integrated analysis of chemical and genomic information in the metabolic pathways. J Am Chem Soc 125: 11853-11865. (Pubitemid 37175419)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.39
, pp. 11853-11865
-
-
Hattori, M.1
Okuno, Y.2
Goto, S.3
Kanehisa, M.4
-
34
-
-
77954288984
-
SIMCOMP/SUBCOMP: Chemical structure search servers for network analyses
-
Hattori M, Tanaka N, Kanehisa M et al (2010) SIMCOMP/SUBCOMP: chemical structure search servers for network analyses. Nucleic Acids Res 38:W652-656.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Hattori, M.1
Tanaka, N.2
Kanehisa, M.3
-
35
-
-
3242885434
-
KCaM (KEGG Carbohydrate Matcher): A software tool for analyzing the structures of carbohydrate sugar chains
-
DOI 10.1093/nar/gkh473
-
Aoki KF, Yamaguchi A, Ueda N et al (2004) KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains. Nucleic Acids Res 32:W267-272. (Pubitemid 38997342)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.WEB SERVER ISS.
-
-
Aoki, K.F.1
Yamaguchi, A.2
Ueda, N.3
Akutsu, T.4
Mamitsuka, H.5
Goto, S.6
Kanehisa, M.7
-
36
-
-
84860889446
-
-
KEGG FTP Site. http://www.genome.jp/kegg/download/.
-
-
-
-
37
-
-
84860882151
-
-
KEGG Feedback. http://www.genome.jp/feedback/.
-
-
-
|